Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is yheT [H]

Identifier: 17545282

GI number: 17545282

Start: 608139

End: 609254

Strand: Reverse

Name: yheT [H]

Synonym: RSc0563

Alternate gene names: 17545282

Gene position: 609254-608139 (Counterclockwise)

Preceding gene: 17545283

Following gene: 17545281

Centisome position: 16.39

GC content: 71.95

Gene sequence:

>1116_bases
ATGATCCGCCCGTTCCGCTCCGCCGCTCCCGCCGACCTCAACCTGGGCGCGCTGCTCATCGGCCCGTTCGAGCCGCACGC
GTTCCGCTCGCCCTGGTGGCTGATCGGCGGCAACGCGCAGACCATCGTCCCGGCGCGGCTGTGGCGCTTCCCGCGCATCG
CGTACCGGCGCGAGCGCTGGGACACGCCCGACGGCGACTTCATCGATCTCGACTGGACCACGCACGAAGCCGATGCGCAC
ACGCCGCTGGTGGTACTGTTCCACGGCCTGGAAGGCGACTCGCGCAGCCACTACGCCCAATTGATGATGGATGCGCTGCG
CGCGCGCCGCTGGCCCGGCGTGGTGCCGCATTTCCGCGGCTGCTCGGGCGAACTGAACCGCGCGCCGCGCATGTACCACT
CCGGCGACTCGGCCGAGATCGCGTGGATCCTCGACCGGCTCTACCGGACGCACTGCGCGCCGCACGGCCGCAAGCTGCTG
GCGGTGGGCATCTCGCTGGGCGGCAACATGCTGCTGCGCCACCTGGGCGAGCGCGGCGCCGATGCGCGCCAGCTGAGCGC
CGCCGCCACCGTCTCCGCCCCGCTGGACATGATGGCGGGCGGCGCGGCGCTGTCCCAGGGCTTCGGCATGCTCTACACCC
GCATGTTCCTGCGCACGCTCAAGCAGAAGGCCGCGGCCAAGCTCGACCAGCATCCCGGCCTGTACGACCGCCACGCCATG
CTGGCCGCGCGCAGCTTCGTCGAATTCGACAACCTCGTCACCGCGCCGCTGCACGGCTACCGCAACGTCTACGACTATTG
GACGCGCGCCTCGTCCAAGCCGGTACTGCGCGATGTGCGCGTGCCGGTGCTGGTGCTGAACGCGCGCAACGATCCCTTCC
TGCCCGGACGCCACCTGCCCGGCCCCGGCGACGTCTCGCCCGACGTGGTGCTCGACCAGCCGCTGCACGGCGGCCACGTC
GGCTTCCTGATGCGGCGCGACGGCAAGCTGCGCCATCTCCCGCTGGCCGGCCGCATCGACTGGATGCCGGCGCGCCTGCT
GCGCTTCTTCGACGACGTGCTCGGCCGCACGCCCCGCCCGGATGCCCCCGAACACCCCGGAGCCGACCGTGGATGA

Upstream 100 bases:

>100_bases
AGGCGGCCGAGGAGCGCGTGGCCGCATCGATCGCCAGCGTCGCGCATTCCCTGCACTGATCCCCGCCCGGCGACGGGCGC
AGGTGACTCTGCCTGAGACG

Downstream 100 bases:

>100_bases
GATCGTCCGCCAGGCCATGGCCCGGTGGCCCGACGTGCCCGACTGCTTCGGCTGGCTGGCGCTCGACCGGCGCGGCCAAT
GGCGCATGCGCAACGAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MIRPFRSAAPADLNLGALLIGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERWDTPDGDFIDLDWTTHEADAH
TPLVVLFHGLEGDSRSHYAQLMMDALRARRWPGVVPHFRGCSGELNRAPRMYHSGDSAEIAWILDRLYRTHCAPHGRKLL
AVGISLGGNMLLRHLGERGADARQLSAAATVSAPLDMMAGGAALSQGFGMLYTRMFLRTLKQKAAAKLDQHPGLYDRHAM
LAARSFVEFDNLVTAPLHGYRNVYDYWTRASSKPVLRDVRVPVLVLNARNDPFLPGRHLPGPGDVSPDVVLDQPLHGGHV
GFLMRRDGKLRHLPLAGRIDWMPARLLRFFDDVLGRTPRPDAPEHPGADRG

Sequences:

>Translated_371_residues
MIRPFRSAAPADLNLGALLIGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERWDTPDGDFIDLDWTTHEADAH
TPLVVLFHGLEGDSRSHYAQLMMDALRARRWPGVVPHFRGCSGELNRAPRMYHSGDSAEIAWILDRLYRTHCAPHGRKLL
AVGISLGGNMLLRHLGERGADARQLSAAATVSAPLDMMAGGAALSQGFGMLYTRMFLRTLKQKAAAKLDQHPGLYDRHAM
LAARSFVEFDNLVTAPLHGYRNVYDYWTRASSKPVLRDVRVPVLVLNARNDPFLPGRHLPGPGDVSPDVVLDQPLHGGHV
GFLMRRDGKLRHLPLAGRIDWMPARLLRFFDDVLGRTPRPDAPEHPGADRG
>Mature_371_residues
MIRPFRSAAPADLNLGALLIGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERWDTPDGDFIDLDWTTHEADAH
TPLVVLFHGLEGDSRSHYAQLMMDALRARRWPGVVPHFRGCSGELNRAPRMYHSGDSAEIAWILDRLYRTHCAPHGRKLL
AVGISLGGNMLLRHLGERGADARQLSAAATVSAPLDMMAGGAALSQGFGMLYTRMFLRTLKQKAAAKLDQHPGLYDRHAM
LAARSFVEFDNLVTAPLHGYRNVYDYWTRASSKPVLRDVRVPVLVLNARNDPFLPGRHLPGPGDVSPDVVLDQPLHGGHV
GFLMRRDGKLRHLPLAGRIDWMPARLLRFFDDVLGRTPRPDAPEHPGADRG

Specific function: Unknown

COG id: COG0429

COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]

Homologues:

Organism=Homo sapiens, GI23397663, Length=314, Percent_Identity=30.8917197452229, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI194578891, Length=325, Percent_Identity=30.7692307692308, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI23397659, Length=257, Percent_Identity=23.7354085603113, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI23397661, Length=257, Percent_Identity=23.7354085603113, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1789752, Length=314, Percent_Identity=40.7643312101911, Blast_Score=207, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17566110, Length=317, Percent_Identity=26.813880126183, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71985405, Length=310, Percent_Identity=25.4838709677419, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71985413, Length=194, Percent_Identity=27.8350515463918, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323866, Length=298, Percent_Identity=25.503355704698, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6319655, Length=271, Percent_Identity=29.8892988929889, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6325162, Length=279, Percent_Identity=29.7491039426523, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24652003, Length=323, Percent_Identity=30.3405572755418, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI281398151, Length=323, Percent_Identity=30.3405572755418, Blast_Score=142, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012020
- InterPro:   IPR000073
- InterPro:   IPR000952 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 41522; Mature: 41522

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPFRSAAPADLNLGALLIGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERW
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCEEHHHHHHHCHHHHHHHHCC
DTPDGDFIDLDWTTHEADAHTPLVVLFHGLEGDSRSHYAQLMMDALRARRWPGVVPHFRG
CCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
CSGELNRAPRMYHSGDSAEIAWILDRLYRTHCAPHGRKLLAVGISLGGNMLLRHLGERGA
CCCCHHCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCC
DARQLSAAATVSAPLDMMAGGAALSQGFGMLYTRMFLRTLKQKAAAKLDQHPGLYDRHAM
CHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LAARSFVEFDNLVTAPLHGYRNVYDYWTRASSKPVLRDVRVPVLVLNARNDPFLPGRHLP
HHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCC
GPGDVSPDVVLDQPLHGGHVGFLMRRDGKLRHLPLAGRIDWMPARLLRFFDDVLGRTPRP
CCCCCCCCEEECCCCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC
DAPEHPGADRG
CCCCCCCCCCC
>Mature Secondary Structure
MIRPFRSAAPADLNLGALLIGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERW
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCEEHHHHHHHCHHHHHHHHCC
DTPDGDFIDLDWTTHEADAHTPLVVLFHGLEGDSRSHYAQLMMDALRARRWPGVVPHFRG
CCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
CSGELNRAPRMYHSGDSAEIAWILDRLYRTHCAPHGRKLLAVGISLGGNMLLRHLGERGA
CCCCHHCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCC
DARQLSAAATVSAPLDMMAGGAALSQGFGMLYTRMFLRTLKQKAAAKLDQHPGLYDRHAM
CHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LAARSFVEFDNLVTAPLHGYRNVYDYWTRASSKPVLRDVRVPVLVLNARNDPFLPGRHLP
HHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCC
GPGDVSPDVVLDQPLHGGHVGFLMRRDGKLRHLPLAGRIDWMPARLLRFFDDVLGRTPRP
CCCCCCCCEEECCCCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC
DAPEHPGADRG
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]