Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is yjbE [H]

Identifier: 17545275

GI number: 17545275

Start: 601059

End: 601757

Strand: Direct

Name: yjbE [H]

Synonym: RSc0556

Alternate gene names: 17545275

Gene position: 601059-601757 (Clockwise)

Preceding gene: 17545274

Following gene: 17545276

Centisome position: 16.17

GC content: 65.67

Gene sequence:

>699_bases
ATGGCGCTCACCTCCAGCGCATTCTGGTTCGCACTTGGCTCCATCATCCTGACCAACATCGTGCTGTCGGGCGACAACGC
TGTCGTCATCGCCCTGGCGGCACGCAATCTGCCTCGCCGGCAGCAGCGGCAGGCGATCTTCTGGGGCAGTGCCGCGGCCA
TCGCGCTGCGGATTGCGCTGACCGTGCTGGCAGTCAAGCTGCTGGCGCTTCCTTATCTGAAAACGATCGGTGCGGTGCTG
CTGGTCTACATCGGCATCAAGCTGCTGAGCGAAGCCGAAGACGAGGCGGCAGGAGAGCACCGCCCACACGACGGCCTGTG
GCCCGCCATCCGAACCATTCTGATTGCCGACCTGGTGATGTCGCTCGACAACGTCGTCGCCGTGGCCGCCGCGGCAGAGA
AGGGGCCGCCGGGGACCGACGTTGCGTTGCTCGTGCTGGGGCTCGGGCTGTCGATTCCGCTGATCATCTTCGGCAGCACG
CTCCTGGTGGCACTGATGGTGCGGCTTCCGCTCATCGTCACGCTCGCGGCGGCACTGCTCGGCTATCTGGCGGGCGACAT
GCTGGTGACCGATCCGGTGGACGCCGGCTGGTTCATGCAAGCCATCCCGTATGCCGATGTCGCGATCGGCTGTCTTGGCG
CGTTGATCGTCGTGATCGTGGGCTGGTGGATGGGGCGGCGTTCACTGCGCCAGGCGTGA

Upstream 100 bases:

>100_bases
TTGTTTGGGCGGCCGCGCCGCCGCGTGCACACTCGGTGTGAGGCGTGTATAAGCAATCACGGCAAGCGGTTCGCGCACGT
GTACATCCACGGGGACGGCC

Downstream 100 bases:

>100_bases
CTTGATGAGACACCCCCCGAAAGTAGGTCGTGACGATCTTTGTCCGGTTTTTTGCCAAGAAAGGTCAGTTTTGCGCACGA
ATTCTCGCCAAATCTTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MALTSSAFWFALGSIILTNIVLSGDNAVVIALAARNLPRRQQRQAIFWGSAAAIALRIALTVLAVKLLALPYLKTIGAVL
LVYIGIKLLSEAEDEAAGEHRPHDGLWPAIRTILIADLVMSLDNVVAVAAAAEKGPPGTDVALLVLGLGLSIPLIIFGST
LLVALMVRLPLIVTLAAALLGYLAGDMLVTDPVDAGWFMQAIPYADVAIGCLGALIVVIVGWWMGRRSLRQA

Sequences:

>Translated_232_residues
MALTSSAFWFALGSIILTNIVLSGDNAVVIALAARNLPRRQQRQAIFWGSAAAIALRIALTVLAVKLLALPYLKTIGAVL
LVYIGIKLLSEAEDEAAGEHRPHDGLWPAIRTILIADLVMSLDNVVAVAAAAEKGPPGTDVALLVLGLGLSIPLIIFGST
LLVALMVRLPLIVTLAAALLGYLAGDMLVTDPVDAGWFMQAIPYADVAIGCLGALIVVIVGWWMGRRSLRQA
>Mature_231_residues
ALTSSAFWFALGSIILTNIVLSGDNAVVIALAARNLPRRQQRQAIFWGSAAAIALRIALTVLAVKLLALPYLKTIGAVLL
VYIGIKLLSEAEDEAAGEHRPHDGLWPAIRTILIADLVMSLDNVVAVAAAAEKGPPGTDVALLVLGLGLSIPLIIFGSTL
LVALMVRLPLIVTLAAALLGYLAGDMLVTDPVDAGWFMQAIPYADVAIGCLGALIVVIVGWWMGRRSLRQA

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022301 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 24434; Mature: 24302

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTSSAFWFALGSIILTNIVLSGDNAVVIALAARNLPRRQQRQAIFWGSAAAIALRIAL
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHH
TVLAVKLLALPYLKTIGAVLLVYIGIKLLSEAEDEAAGEHRPHDGLWPAIRTILIADLVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SLDNVVAVAAAAEKGPPGTDVALLVLGLGLSIPLIIFGSTLLVALMVRLPLIVTLAAALL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLAGDMLVTDPVDAGWFMQAIPYADVAIGCLGALIVVIVGWWMGRRSLRQA
HHHHCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALTSSAFWFALGSIILTNIVLSGDNAVVIALAARNLPRRQQRQAIFWGSAAAIALRIAL
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHH
TVLAVKLLALPYLKTIGAVLLVYIGIKLLSEAEDEAAGEHRPHDGLWPAIRTILIADLVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SLDNVVAVAAAAEKGPPGTDVALLVLGLGLSIPLIIFGSTLLVALMVRLPLIVTLAAALL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYLAGDMLVTDPVDAGWFMQAIPYADVAIGCLGALIVVIVGWWMGRRSLRQA
HHHHCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]