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The map label for this gene is 17545252

Identifier: 17545252

GI number: 17545252

Start: 571524

End: 572555

Strand: Reverse

Name: 17545252

Synonym: RSc0533

Alternate gene names: NA

Gene position: 572555-571524 (Counterclockwise)

Preceding gene: 17545253

Following gene: 17545251

Centisome position: 15.41

GC content: 74.81

Gene sequence:

>1032_bases
TTGCCAACGCCCATCTCCGCCACGCCACCCATGACCCAGCCTTCCATCGCCATCGTCGGAGCCGGCATTGCCGGCGTAGC
CTGTGCCAACGCGCTCGCCGCGGAGGGCATTTCCGCCACCGTCTACGAGCGCGGCGGCGGCGTGGGCGGCCGGCTGGCGA
CGCGGGTGCTGCCGGAAGGCGCCCCGACCCACGCCTTCGACCACGGCGCTCAGTCGTTCAACGTGCGCACCGAAGCCTTC
CGCCGCGCCGTGGACGCCGCCCGCCGCCAGGGCCTGGTGATGCCCTGGCCGGCCCGCTGGGGCCACCGCACGGCCGACGG
CCTGCAGGCCGATACGCGCGACGAGGCCCGCTACGTCGGCCAGCCCGGCATGAGCGCGCTGGTGCGCAGCCTGGCCACCC
CGCTGGACGTGCGCCTCGGCCATGCCGTCACGCGCGTCGCGCACGCGGGCAAGGGGTGGACGCTGCATCGCGACGGCGCC
GATGCCGCGCAGGCCGACCTGGTCGTGCTTGCGCTGCCCGCGCCCGAGCTGCCGGCCCTGTTCGACGATGGCGGCGCGCC
GGCCACGCTGCGCGACGCCATCGCGCCGGTCCGCTACGCGCCGTGCTGGGCGCTGATGATGGGATTCGCCCAGCCGCTGC
CCCTGCCCTATGACGGCATCCGCATCGACGACGACATGCTGGCCTGGGCCGCCCGCGACAACACCAAGCCGGGCCGCGTG
ATGGTCGACGAATCCTGGGTGGTGCACGCCTCGCCCGGCTGGTCGGCGGCGCACGCGGGCGATACGCCCGAACACGCGCT
GCACGCCATGCACGCCCGCTTCGCCGAGGCCTTCCCCGGCACGCCCGAGCCCACCGTCATGGCCGCGCACCTGTGGCCGT
ACGCGCTGGTGGAGCAGTCTGCCGGCACCCCGTGCCTCTGGGACGCCGCCAGCCGCCTGGGCGCCTGCGGCGACTGGTGC
GAGGGGCCGCGCGTGGAGGCCGCTTTCCTGAGCGGTGTGGCATTGGCCGCAAAGATCGCCGAAGCGCTATAG

Upstream 100 bases:

>100_bases
ACCTGGGCTACAAGTTCTGAGCCCCGGCCGCCCCCCCGCGCCGACGCCACCTCCGGGTGGCGTTTTTCATTGGGCGGCGA
CCCGATATCATGGCGGGGTT

Downstream 100 bases:

>100_bases
GAAAACGCCGCCGGGCGTTACAATCTCAGGCTGTCTCGTGTTTCGTGTGCCGGGTCGCTCACCCGGCGGTGGACTGTTCC
TGACGACGCCATGCGTACCC

Product: transmembrane protein

Products: NA

Alternate protein names: Transmembrane Protein; Amine Oxidase Flavin-Containing; Amine Oxidase; Deoxyribodipyrimidine Photolyase; NAD/Fad-Dependent Oxidoreductase Protein; NAD/FAD-Dependent Oxidoreductase; Fad Dependent Oxidoreductase

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MPTPISATPPMTQPSIAIVGAGIAGVACANALAAEGISATVYERGGGVGGRLATRVLPEGAPTHAFDHGAQSFNVRTEAF
RRAVDAARRQGLVMPWPARWGHRTADGLQADTRDEARYVGQPGMSALVRSLATPLDVRLGHAVTRVAHAGKGWTLHRDGA
DAAQADLVVLALPAPELPALFDDGGAPATLRDAIAPVRYAPCWALMMGFAQPLPLPYDGIRIDDDMLAWAARDNTKPGRV
MVDESWVVHASPGWSAAHAGDTPEHALHAMHARFAEAFPGTPEPTVMAAHLWPYALVEQSAGTPCLWDAASRLGACGDWC
EGPRVEAAFLSGVALAAKIAEAL

Sequences:

>Translated_343_residues
MPTPISATPPMTQPSIAIVGAGIAGVACANALAAEGISATVYERGGGVGGRLATRVLPEGAPTHAFDHGAQSFNVRTEAF
RRAVDAARRQGLVMPWPARWGHRTADGLQADTRDEARYVGQPGMSALVRSLATPLDVRLGHAVTRVAHAGKGWTLHRDGA
DAAQADLVVLALPAPELPALFDDGGAPATLRDAIAPVRYAPCWALMMGFAQPLPLPYDGIRIDDDMLAWAARDNTKPGRV
MVDESWVVHASPGWSAAHAGDTPEHALHAMHARFAEAFPGTPEPTVMAAHLWPYALVEQSAGTPCLWDAASRLGACGDWC
EGPRVEAAFLSGVALAAKIAEAL
>Mature_342_residues
PTPISATPPMTQPSIAIVGAGIAGVACANALAAEGISATVYERGGGVGGRLATRVLPEGAPTHAFDHGAQSFNVRTEAFR
RAVDAARRQGLVMPWPARWGHRTADGLQADTRDEARYVGQPGMSALVRSLATPLDVRLGHAVTRVAHAGKGWTLHRDGAD
AAQADLVVLALPAPELPALFDDGGAPATLRDAIAPVRYAPCWALMMGFAQPLPLPYDGIRIDDDMLAWAARDNTKPGRVM
VDESWVVHASPGWSAAHAGDTPEHALHAMHARFAEAFPGTPEPTVMAAHLWPYALVEQSAGTPCLWDAASRLGACGDWCE
GPRVEAAFLSGVALAAKIAEAL

Specific function: Unknown

COG id: COG3380

COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35964; Mature: 35833

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPISATPPMTQPSIAIVGAGIAGVACANALAAEGISATVYERGGGVGGRLATRVLPEG
CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCC
APTHAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGHRTADGLQADTRDEARYVG
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
QPGMSALVRSLATPLDVRLGHAVTRVAHAGKGWTLHRDGADAAQADLVVLALPAPELPAL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCC
FDDGGAPATLRDAIAPVRYAPCWALMMGFAQPLPLPYDGIRIDDDMLAWAARDNTKPGRV
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEECHHHHEEECCCCCCCCEE
MVDESWVVHASPGWSAAHAGDTPEHALHAMHARFAEAFPGTPEPTVMAAHLWPYALVEQS
EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHC
AGTPCLWDAASRLGACGDWCEGPRVEAAFLSGVALAAKIAEAL
CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PTPISATPPMTQPSIAIVGAGIAGVACANALAAEGISATVYERGGGVGGRLATRVLPEG
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCC
APTHAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGHRTADGLQADTRDEARYVG
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
QPGMSALVRSLATPLDVRLGHAVTRVAHAGKGWTLHRDGADAAQADLVVLALPAPELPAL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCC
FDDGGAPATLRDAIAPVRYAPCWALMMGFAQPLPLPYDGIRIDDDMLAWAARDNTKPGRV
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEECHHHHEEECCCCCCCCEE
MVDESWVVHASPGWSAAHAGDTPEHALHAMHARFAEAFPGTPEPTVMAAHLWPYALVEQS
EEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHC
AGTPCLWDAASRLGACGDWCEGPRVEAAFLSGVALAAKIAEAL
CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA