| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545251
Identifier: 17545251
GI number: 17545251
Start: 571077
End: 571433
Strand: Reverse
Name: 17545251
Synonym: RSc0532
Alternate gene names: NA
Gene position: 571433-571077 (Counterclockwise)
Preceding gene: 17545252
Following gene: 17545250
Centisome position: 15.38
GC content: 69.47
Gene sequence:
>357_bases ATGCGTACCCGACGCCAAGTCCTTGCTCTCGCCTGCGCCGCATTCGCGGCCGCGGTGCCCCTGCTGACCGCCCATGCGCA GGTGCTGCGCAACATCCCGGCGGACGCCCCGCGCGCCAAGCTGACCGTCACCTCGGTCAATACCGGCACGCTCGACGGCG GCCTCATCAGCAGCGGCACGGAAATCCGCTTCGCGCCGGGCGTGCGGATCATCTCGCAGGAGGGGCGCCTGCTGCCGACC AGCTCGCTGGTCGGCCAGACGCTCAAGGTGCGCTACAAGCTCGACCTGTACCAGCAGTTGCTGACCGCCTGGGCCGTCAG CGACGACGAGTACAAGGCGGCGGCGAGCAGCCAGTAA
Upstream 100 bases:
>100_bases AGCGCTATAGGAAAACGCCGCCGGGCGTTACAATCTCAGGCTGTCTCGTGTTTCGTGTGCCGGGTCGCTCACCCGGCGGT GGACTGTTCCTGACGACGCC
Downstream 100 bases:
>100_bases GCCAACCGGGGGCCACCCGCCCCGCGAAGCACGTGCCCCCAGGTCAACCACTGCGAACGGCACATGAAAAAAGTCTTCAT CAAAACCTTCGGCTGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGTEIRFAPGVRIISQEGRLLPT SSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ
Sequences:
>Translated_118_residues MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGTEIRFAPGVRIISQEGRLLPT SSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ >Mature_118_residues MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGTEIRFAPGVRIISQEGRLLPT SSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12594; Mature: 12594
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEECCCC EIRFAPGVRIISQEGRLLPTSSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ EEEECCCEEEECCCCCCCCCHHHHCCHHEEEEHHHHHHHHHHHHCCCCCHHCCCCCCC >Mature Secondary Structure MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEECCCC EIRFAPGVRIISQEGRLLPTSSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ EEEECCCEEEECCCCCCCCCHHHHCCHHEEEEHHHHHHHHHHHHCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA