Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is 17545251

Identifier: 17545251

GI number: 17545251

Start: 571077

End: 571433

Strand: Reverse

Name: 17545251

Synonym: RSc0532

Alternate gene names: NA

Gene position: 571433-571077 (Counterclockwise)

Preceding gene: 17545252

Following gene: 17545250

Centisome position: 15.38

GC content: 69.47

Gene sequence:

>357_bases
ATGCGTACCCGACGCCAAGTCCTTGCTCTCGCCTGCGCCGCATTCGCGGCCGCGGTGCCCCTGCTGACCGCCCATGCGCA
GGTGCTGCGCAACATCCCGGCGGACGCCCCGCGCGCCAAGCTGACCGTCACCTCGGTCAATACCGGCACGCTCGACGGCG
GCCTCATCAGCAGCGGCACGGAAATCCGCTTCGCGCCGGGCGTGCGGATCATCTCGCAGGAGGGGCGCCTGCTGCCGACC
AGCTCGCTGGTCGGCCAGACGCTCAAGGTGCGCTACAAGCTCGACCTGTACCAGCAGTTGCTGACCGCCTGGGCCGTCAG
CGACGACGAGTACAAGGCGGCGGCGAGCAGCCAGTAA

Upstream 100 bases:

>100_bases
AGCGCTATAGGAAAACGCCGCCGGGCGTTACAATCTCAGGCTGTCTCGTGTTTCGTGTGCCGGGTCGCTCACCCGGCGGT
GGACTGTTCCTGACGACGCC

Downstream 100 bases:

>100_bases
GCCAACCGGGGGCCACCCGCCCCGCGAAGCACGTGCCCCCAGGTCAACCACTGCGAACGGCACATGAAAAAAGTCTTCAT
CAAAACCTTCGGCTGCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGTEIRFAPGVRIISQEGRLLPT
SSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ

Sequences:

>Translated_118_residues
MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGTEIRFAPGVRIISQEGRLLPT
SSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ
>Mature_118_residues
MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGTEIRFAPGVRIISQEGRLLPT
SSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12594; Mature: 12594

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEECCCC
EIRFAPGVRIISQEGRLLPTSSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ
EEEECCCEEEECCCCCCCCCHHHHCCHHEEEEHHHHHHHHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure
MRTRRQVLALACAAFAAAVPLLTAHAQVLRNIPADAPRAKLTVTSVNTGTLDGGLISSGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEECCCC
EIRFAPGVRIISQEGRLLPTSSLVGQTLKVRYKLDLYQQLLTAWAVSDDEYKAAASSQ
EEEECCCEEEECCCCCCCCCHHHHCCHHEEEEHHHHHHHHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA