Click here to switch to the map view.

The map label for this gene is 17545244

Identifier: 17545244

GI number: 17545244

Start: 563445

End: 564080

Strand: Reverse

Name: 17545244

Synonym: RSc0525

Alternate gene names: NA

Gene position: 564080-563445 (Counterclockwise)

Preceding gene: 17545245

Following gene: 17545243

Centisome position: 15.18

GC content: 76.26

Gene sequence:

>636_bases
ATGACGCTCGCTCGCGCCCGGCGCGGCCTGGCCCTGCTGATGGCCGCCGCGCTGACCCTGCCCGCGGGGATCGCGCAGGC
ACGGCACCATCGGGCCGCCCGGCCGGCGCCGGCCGCCGACAAGGTCTTCACCGTGCCCGACAACCTGTCGCAGCTGTGCG
TGGCCGACGCCAAGCCGCTGCAGCAGGCCCTGGCCGCCCAGTGGACGCCCGCGCCCGCCTCGCTCGACCAGTGGACCAGC
CTGGCCCGCACCATCGCATGCGACCTGTCCGGCGCGCGCGACCTCGGCTGGCACCGCGTACCGCTGCGGACCTACGCGAC
CACCCTGCGCTTCCCCTTCTCCTGGACCGAATGGCAGGGCCCGGGCGGCAAGGCGCAGCGCCGCACGCGCGTGTTCCGCT
CGCCGGCGCAGCTGCCGAGCCGGCTCGAATTCAACGTATCGGGCTCGCTGCAGGAGGTGCGCTACGACGCCCGCCGCGGC
ATGCTGAGCGCCCGCTTCCTGCGCCGCGAGGCCGCCACGCCGGCCGCGCCGCCGCCTCCGCCGGGCCAGTGCGCCGGCAC
GCAGCTGCAGTTCCAGCAGCAGAACGGCGTGTGGCTGCTGTCGGGCGTGGAGCCCGTGCCGGGCTCGCCCTGCTGA

Upstream 100 bases:

>100_bases
ACCTGTCGCGGCTGGTGGCGCAGGCCTACTACGACTCGCGCGAGCGCCTGGGCTTCCCGATGTGCGGCACGGCCGCGGCG
CCGGCGGCCACGGAGGCCGC

Downstream 100 bases:

>100_bases
ACCCAACACCGTAACCGCCGCCCGCGCGCGGCGCAGAACAACGACGTCTCTGATTCTTACGCTATGTCCACCCTCCTGAT
CGAACTGCTGACCGAAGAAC

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTLARARRGLALLMAAALTLPAGIAQARHHRAARPAPAADKVFTVPDNLSQLCVADAKPLQQALAAQWTPAPASLDQWTS
LARTIACDLSGARDLGWHRVPLRTYATTLRFPFSWTEWQGPGGKAQRRTRVFRSPAQLPSRLEFNVSGSLQEVRYDARRG
MLSARFLRREAATPAAPPPPPGQCAGTQLQFQQQNGVWLLSGVEPVPGSPC

Sequences:

>Translated_211_residues
MTLARARRGLALLMAAALTLPAGIAQARHHRAARPAPAADKVFTVPDNLSQLCVADAKPLQQALAAQWTPAPASLDQWTS
LARTIACDLSGARDLGWHRVPLRTYATTLRFPFSWTEWQGPGGKAQRRTRVFRSPAQLPSRLEFNVSGSLQEVRYDARRG
MLSARFLRREAATPAAPPPPPGQCAGTQLQFQQQNGVWLLSGVEPVPGSPC
>Mature_210_residues
TLARARRGLALLMAAALTLPAGIAQARHHRAARPAPAADKVFTVPDNLSQLCVADAKPLQQALAAQWTPAPASLDQWTSL
ARTIACDLSGARDLGWHRVPLRTYATTLRFPFSWTEWQGPGGKAQRRTRVFRSPAQLPSRLEFNVSGSLQEVRYDARRGM
LSARFLRREAATPAAPPPPPGQCAGTQLQFQQQNGVWLLSGVEPVPGSPC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22922; Mature: 22790

Theoretical pI: Translated: 11.75; Mature: 11.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLARARRGLALLMAAALTLPAGIAQARHHRAARPAPAADKVFTVPDNLSQLCVADAKPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHCHHHH
QQALAAQWTPAPASLDQWTSLARTIACDLSGARDLGWHRVPLRTYATTLRFPFSWTEWQG
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
PGGKAQRRTRVFRSPAQLPSRLEFNVSGSLQEVRYDARRGMLSARFLRREAATPAAPPPP
CCCHHHHHHHHHHCHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PGQCAGTQLQFQQQNGVWLLSGVEPVPGSPC
CCCCCCCEEEEECCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
TLARARRGLALLMAAALTLPAGIAQARHHRAARPAPAADKVFTVPDNLSQLCVADAKPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHCHHHH
QQALAAQWTPAPASLDQWTSLARTIACDLSGARDLGWHRVPLRTYATTLRFPFSWTEWQG
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
PGGKAQRRTRVFRSPAQLPSRLEFNVSGSLQEVRYDARRGMLSARFLRREAATPAAPPPP
CCCHHHHHHHHHHCHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PGQCAGTQLQFQQQNGVWLLSGVEPVPGSPC
CCCCCCCEEEEECCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA