Click here to switch to the map view.

The map label for this gene is dadA [H]

Identifier: 17545226

GI number: 17545226

Start: 541911

End: 543182

Strand: Reverse

Name: dadA [H]

Synonym: RSc0507

Alternate gene names: 17545226

Gene position: 543182-541911 (Counterclockwise)

Preceding gene: 17545227

Following gene: 17545225

Centisome position: 14.62

GC content: 73.19

Gene sequence:

>1272_bases
ATGCACAGCGACACAGCGGCCCCGGCCGGGCGACGGGCCATCACGGTGGTGGGCGCCGGCATCGTCGGCGTGTCATGCGC
CTTGCAGCTGCAGCGCGACGGCCACCGGGTCACCCTGCTGGACCAGGCGGGCATCGGCGAAGGATGCTCGTACGGCAATG
CCGGCTGCCTCAGCGTGGCATCGGTGGTGGCGATGGCGCTGCCGGGCATGCTCGCGCAGGTGCCCAAATGGCTGGCGGAC
CCGCTGGGGCCGCTGACGGTGCGCTGGTCCTACCTGCCGCGCGCGCTGCCGTGGCTGCTCAAGTGGATCCGCGCCGGCAC
CGAGGCGCGAGCGCGCGCCGTGGCGCGGCCGCTGGCCGACCTCTTCAGCGCGACCTATCCCGGCTACCGCGGCCTGCTGG
AGCCCGCCCAGTACGACGACCTGATCCGCGCCACCGGCCACCTGTACGTGTGGCGCACGCTGGCGCGCGGCCCGGGCGAG
GTGCTGGCGCAATCCATCCGCGACGCCACCGGCGTGCGCTCGCAGGCACTGAGCGCGGGCGAAGTCCGCGAGCTGGAGCC
GGCCCTCGCCGGCGACATCCGGTCCGGCCTGCTGCTGCCGGACAACGGCTTCACCTGCAACCCGGAGCGGCTGGTCAAGA
CGCTCGCGGCCCATTTCGTCGCGGCCGGCGGCACCGTGCTGCGGCGCAAGGTGCTGGACTTCGCGCTGGGCGAGCGCGGC
CCCACCCGCCTGTACACCGACTGCGGTTCGCTACCGGTCTCGACGCTGGTGATCTGCGCGGGCGCGTGGTCGATGCGGCT
GGGCGCCAGGCTCACCGGCGTGCGCATCCCGCTCGACACGGAGCGCGGCTACCACGCCATGCTGCGCGCGCCGACGGTGC
AGCCCTCGCGGCCGGTCATGGACTGCGAGCGCAAGTTCATCGCCACGCCGATGGAAGACGGCCTGCGCATCGCCGGCACG
GTGGAGATCGGCGGCCTGGACATCCCACCCGACTTCCGCCGCGCCGATACGCTGACCCGGCACGGCCAGGCGCTGTTCCC
GGGCCTCGCCTTCACCGGCGACAGCGCCTGGATGGGCTATCGGCCCTCCATTCCCGACAGCCTGCCCGTGATCGACCGCT
CCGAGCGGTTCCCCGATGTCTTCTTCGCCTTCGGCCACGGCCACCTGGGCATGACGGGGGCGCCGGGCACCGGCCGGCTG
ATCGCCGATCTGGTCGCCGGCCGGCCGCCATTCATCGATGCCCGCCCCTACGGCCTGCAACGTTTTGACTGA

Upstream 100 bases:

>100_bases
GGCATCGCGCTGACACTGCTCGAATGCGTGCCGCCGCTCAAGCACGAACTGGCGCGGCAGATGATGTTCGGGCAACGGGG
CTAGCGCCGCCATCCAGCTT

Downstream 100 bases:

>100_bases
GGCATGACGGACGCTAGGGCGGCGCAGGTGATTGACGATCACCTTTTTTGCGGATCATGGCGGCAATTGACGTGATGACG
GCATGCCGCCGCTGCCTGAG

Product: amino acid dehydrogenase transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MHSDTAAPAGRRAITVVGAGIVGVSCALQLQRDGHRVTLLDQAGIGEGCSYGNAGCLSVASVVAMALPGMLAQVPKWLAD
PLGPLTVRWSYLPRALPWLLKWIRAGTEARARAVARPLADLFSATYPGYRGLLEPAQYDDLIRATGHLYVWRTLARGPGE
VLAQSIRDATGVRSQALSAGEVRELEPALAGDIRSGLLLPDNGFTCNPERLVKTLAAHFVAAGGTVLRRKVLDFALGERG
PTRLYTDCGSLPVSTLVICAGAWSMRLGARLTGVRIPLDTERGYHAMLRAPTVQPSRPVMDCERKFIATPMEDGLRIAGT
VEIGGLDIPPDFRRADTLTRHGQALFPGLAFTGDSAWMGYRPSIPDSLPVIDRSERFPDVFFAFGHGHLGMTGAPGTGRL
IADLVAGRPPFIDARPYGLQRFD

Sequences:

>Translated_423_residues
MHSDTAAPAGRRAITVVGAGIVGVSCALQLQRDGHRVTLLDQAGIGEGCSYGNAGCLSVASVVAMALPGMLAQVPKWLAD
PLGPLTVRWSYLPRALPWLLKWIRAGTEARARAVARPLADLFSATYPGYRGLLEPAQYDDLIRATGHLYVWRTLARGPGE
VLAQSIRDATGVRSQALSAGEVRELEPALAGDIRSGLLLPDNGFTCNPERLVKTLAAHFVAAGGTVLRRKVLDFALGERG
PTRLYTDCGSLPVSTLVICAGAWSMRLGARLTGVRIPLDTERGYHAMLRAPTVQPSRPVMDCERKFIATPMEDGLRIAGT
VEIGGLDIPPDFRRADTLTRHGQALFPGLAFTGDSAWMGYRPSIPDSLPVIDRSERFPDVFFAFGHGHLGMTGAPGTGRL
IADLVAGRPPFIDARPYGLQRFD
>Mature_423_residues
MHSDTAAPAGRRAITVVGAGIVGVSCALQLQRDGHRVTLLDQAGIGEGCSYGNAGCLSVASVVAMALPGMLAQVPKWLAD
PLGPLTVRWSYLPRALPWLLKWIRAGTEARARAVARPLADLFSATYPGYRGLLEPAQYDDLIRATGHLYVWRTLARGPGE
VLAQSIRDATGVRSQALSAGEVRELEPALAGDIRSGLLLPDNGFTCNPERLVKTLAAHFVAAGGTVLRRKVLDFALGERG
PTRLYTDCGSLPVSTLVICAGAWSMRLGARLTGVRIPLDTERGYHAMLRAPTVQPSRPVMDCERKFIATPMEDGLRIAGT
VEIGGLDIPPDFRRADTLTRHGQALFPGLAFTGDSAWMGYRPSIPDSLPVIDRSERFPDVFFAFGHGHLGMTGAPGTGRL
IADLVAGRPPFIDARPYGLQRFD

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=423, Percent_Identity=28.3687943262411, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45378; Mature: 45378

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSDTAAPAGRRAITVVGAGIVGVSCALQLQRDGHRVTLLDQAGIGEGCSYGNAGCLSVA
CCCCCCCCCCCEEEEEEECCHHHHHHEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHH
SVVAMALPGMLAQVPKWLADPLGPLTVRWSYLPRALPWLLKWIRAGTEARARAVARPLAD
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LFSATYPGYRGLLEPAQYDDLIRATGHLYVWRTLARGPGEVLAQSIRDATGVRSQALSAG
HHHCCCCCHHCCCCCHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
EVRELEPALAGDIRSGLLLPDNGFTCNPERLVKTLAAHFVAAGGTVLRRKVLDFALGERG
CHHHHCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PTRLYTDCGSLPVSTLVICAGAWSMRLGARLTGVRIPLDTERGYHAMLRAPTVQPSRPVM
CCEEECCCCCCHHHHHHHHHCCHHHHHCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHH
DCERKFIATPMEDGLRIAGTVEIGGLDIPPDFRRADTLTRHGQALFPGLAFTGDSAWMGY
HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCHHCCCEEECCCCCCCCC
RPSIPDSLPVIDRSERFPDVFFAFGHGHLGMTGAPGTGRLIADLVAGRPPFIDARPYGLQ
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
RFD
CCC
>Mature Secondary Structure
MHSDTAAPAGRRAITVVGAGIVGVSCALQLQRDGHRVTLLDQAGIGEGCSYGNAGCLSVA
CCCCCCCCCCCEEEEEEECCHHHHHHEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHH
SVVAMALPGMLAQVPKWLADPLGPLTVRWSYLPRALPWLLKWIRAGTEARARAVARPLAD
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LFSATYPGYRGLLEPAQYDDLIRATGHLYVWRTLARGPGEVLAQSIRDATGVRSQALSAG
HHHCCCCCHHCCCCCHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
EVRELEPALAGDIRSGLLLPDNGFTCNPERLVKTLAAHFVAAGGTVLRRKVLDFALGERG
CHHHHCHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PTRLYTDCGSLPVSTLVICAGAWSMRLGARLTGVRIPLDTERGYHAMLRAPTVQPSRPVM
CCEEECCCCCCHHHHHHHHHCCHHHHHCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHH
DCERKFIATPMEDGLRIAGTVEIGGLDIPPDFRRADTLTRHGQALFPGLAFTGDSAWMGY
HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCHHCCCEEECCCCCCCCC
RPSIPDSLPVIDRSERFPDVFFAFGHGHLGMTGAPGTGRLIADLVAGRPPFIDARPYGLQ
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
RFD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA