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The map label for this gene is 17545117

Identifier: 17545117

GI number: 17545117

Start: 424696

End: 426624

Strand: Reverse

Name: 17545117

Synonym: RSc0398

Alternate gene names: NA

Gene position: 426624-424696 (Counterclockwise)

Preceding gene: 17545121

Following gene: 17545116

Centisome position: 11.48

GC content: 69.67

Gene sequence:

>1929_bases
TTGACCATGCCGCACGCCTTCTCCCGCCAGCCCGCGACGCACCGTTCCGGGCGCTTTCCGCGCAGCCGGGCGCTCCTGCT
GGCCTCGCTGCTTGCGGCGGGATTGGCGAGCCTGCCGGCGTGGGCCGCGGCACCGGCCACGCGGACGGCACAGGCGGCGC
CTGAAGGCAGCAGCCGGGCAGCGGTCCAGCTCGAAAAATCCCGGCCGCGCGGCAACCTGCTGGCGACCGACCGCACCGAC
CTGCCGGCCGTCCCGCTCTCCGAAGACATCATGTACCGCGTGCTGGCGTCCGAGGTGTCGCTGCAACGCGGCCTGGTCGA
GCCGGCCTACCGCACCTACCTCGGCCTCGCGCAGGACACGCGCGACCCGCGCTTCGCCCAGCGCGCCACCGAGATCGCCT
TCCTGACCCGCTCCCCCTCGCAGGCGCTGACGGCCGCGCGGCTGTGGGTCGAGCTCGCCCCCACCTCGATGCCGGCGCGC
CAGGTGCAGCAGCTGCTGATGGTCGCCACGGGCCAGTGGAGCGAAGTCGAGCCGATGCTACAGGCACAGTTGAACAAGGT
CTCGCCCGGACAGCGCGCCGAGGCCATCCTGCAACTGCAGCAGCAGATGTCCAAGAGCAATGACCCGGCCGGCGCCGTTT
CCGCCCTGCAACGCCTGACCACGCACGACGCGCAGCGACCGGAAACCCACCTGGCGCTGGCCCGCGCCAAGGTGGTCGCC
AAGGACAACACCGGCGCGCTGTCCGAGCTCGACACCGCGCTCAAGCTGCGCCCCGGCTATGAAGATGCCGCCATCCTGGC
CGCCGAACTGCGCGCAGACAGCGATCCCGACGCCGCCATCAGCGGCCTGCGTACGTTCCTGAAGGCGGCGCCGGCTTCCA
TCGACGGGCACCTCGCGCTGGCCCGCATGTATCTGGTCCGCAATCAGAATGACCAGGCGCGCGCCGAATTCGAAGCGCTC
AGGAAAATCGCCCCGACCGACCCGCGCATCCCGCTGGCGCTGGGCCTGCTGAACCTGCAACAGCGGCAGTACGACTCGGC
CGAACAGTATCTGAAGGAATACGTCGCGCAGGCCGCCAAGTCGCCCTCGCTGAGCCCCGAGCCCGGCTACCAGGGCCTGG
CGCAAGTGGCCGAGGAAAAACGCGACTACGCCGGCGCCATCACGTGGCTGGACAAGATCGCCGGCGCCTCGAACGGCGAT
GGCGACGGCCAGGTGGCGCTTGCCGCCGGCATCAAGCGCGCCCAGTTGCTCGGCAAGCTGCGTCGCATCGATGAAGCGCA
GCAGGCCTTCGACGAGCTCATCGCCGACACCGAAGACGTGCCCGACGGCCCGCGCCGGCAAGCCCTGATGGACGGCATCC
GCCAGGCCGAGGTCGGCATGCTGATGGACGCCAAGGCGTACGGACGCGCACGTGCCCGCGTCAACGACCTCCTGAGGACC
AGCCCCGACAGCGTCGAATACACCTATCAGCTGTCGATGCTCGAAGAGCACGACGGCCATTACGACAACATGGAGACCCT
GCTGCGCAAGGTGATCGACCTGCGCCCGGGCCAGGCGATCGGCTACAACGCGCTCGGCTACTCGCTGGCCGATCGCAACA
TCCGCCTGCAGGAAGCGCAGGAACTGCTGGAAAAAGCCGTATCGCTGGCGCCGGACGACCCCTACATCGCCGACAGCCTG
GGCTGGGTCAAGTACCGCCGCGGCGACCTGCCGGCCGCCACCGACATCCTGCGCAAAGCCTGGGCCGCCGCGCCGCAGGC
CGAGATCGGCGCTCACCTGGGCGAAGTGCTGTGGCAGTCGGGCAAGCAGGACGATGCCCGCAAGGTCTGGACCGAAGCCG
CCAAGCTCGATATCAACGACACGACCCTGCGCGAGACACTGCACCGCTTCAGCCAGCCGCTGCCGGACGCGCCCACGAGC
GCGAACTGA

Upstream 100 bases:

>100_bases
GGCATCGAACCTCCGCCGCATGCGCGGCTCCAATCGGTGATTGATCAGACGGCAATTGTAGCGGTCAGGCTACAATGAGC
CGAACCGAATCCGGAGTCTT

Downstream 100 bases:

>100_bases
TGGCGACCGTGTTTTCGCGAGCGCTCGGCGCGCTGGTGCTGGGTGTTGCGTGCGCGCTGCTTGCAGGCTGCGCCAGCGTA
CGGCCGGCCAACGACCTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 641

Protein sequence:

>642_residues
MTMPHAFSRQPATHRSGRFPRSRALLLASLLAAGLASLPAWAAAPATRTAQAAPEGSSRAAVQLEKSRPRGNLLATDRTD
LPAVPLSEDIMYRVLASEVSLQRGLVEPAYRTYLGLAQDTRDPRFAQRATEIAFLTRSPSQALTAARLWVELAPTSMPAR
QVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQLQQQMSKSNDPAGAVSALQRLTTHDAQRPETHLALARAKVVA
KDNTGALSELDTALKLRPGYEDAAILAAELRADSDPDAAISGLRTFLKAAPASIDGHLALARMYLVRNQNDQARAEFEAL
RKIAPTDPRIPLALGLLNLQQRQYDSAEQYLKEYVAQAAKSPSLSPEPGYQGLAQVAEEKRDYAGAITWLDKIAGASNGD
GDGQVALAAGIKRAQLLGKLRRIDEAQQAFDELIADTEDVPDGPRRQALMDGIRQAEVGMLMDAKAYGRARARVNDLLRT
SPDSVEYTYQLSMLEEHDGHYDNMETLLRKVIDLRPGQAIGYNALGYSLADRNIRLQEAQELLEKAVSLAPDDPYIADSL
GWVKYRRGDLPAATDILRKAWAAAPQAEIGAHLGEVLWQSGKQDDARKVWTEAAKLDINDTTLRETLHRFSQPLPDAPTS
AN

Sequences:

>Translated_642_residues
MTMPHAFSRQPATHRSGRFPRSRALLLASLLAAGLASLPAWAAAPATRTAQAAPEGSSRAAVQLEKSRPRGNLLATDRTD
LPAVPLSEDIMYRVLASEVSLQRGLVEPAYRTYLGLAQDTRDPRFAQRATEIAFLTRSPSQALTAARLWVELAPTSMPAR
QVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQLQQQMSKSNDPAGAVSALQRLTTHDAQRPETHLALARAKVVA
KDNTGALSELDTALKLRPGYEDAAILAAELRADSDPDAAISGLRTFLKAAPASIDGHLALARMYLVRNQNDQARAEFEAL
RKIAPTDPRIPLALGLLNLQQRQYDSAEQYLKEYVAQAAKSPSLSPEPGYQGLAQVAEEKRDYAGAITWLDKIAGASNGD
GDGQVALAAGIKRAQLLGKLRRIDEAQQAFDELIADTEDVPDGPRRQALMDGIRQAEVGMLMDAKAYGRARARVNDLLRT
SPDSVEYTYQLSMLEEHDGHYDNMETLLRKVIDLRPGQAIGYNALGYSLADRNIRLQEAQELLEKAVSLAPDDPYIADSL
GWVKYRRGDLPAATDILRKAWAAAPQAEIGAHLGEVLWQSGKQDDARKVWTEAAKLDINDTTLRETLHRFSQPLPDAPTS
AN
>Mature_641_residues
TMPHAFSRQPATHRSGRFPRSRALLLASLLAAGLASLPAWAAAPATRTAQAAPEGSSRAAVQLEKSRPRGNLLATDRTDL
PAVPLSEDIMYRVLASEVSLQRGLVEPAYRTYLGLAQDTRDPRFAQRATEIAFLTRSPSQALTAARLWVELAPTSMPARQ
VQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQLQQQMSKSNDPAGAVSALQRLTTHDAQRPETHLALARAKVVAK
DNTGALSELDTALKLRPGYEDAAILAAELRADSDPDAAISGLRTFLKAAPASIDGHLALARMYLVRNQNDQARAEFEALR
KIAPTDPRIPLALGLLNLQQRQYDSAEQYLKEYVAQAAKSPSLSPEPGYQGLAQVAEEKRDYAGAITWLDKIAGASNGDG
DGQVALAAGIKRAQLLGKLRRIDEAQQAFDELIADTEDVPDGPRRQALMDGIRQAEVGMLMDAKAYGRARARVNDLLRTS
PDSVEYTYQLSMLEEHDGHYDNMETLLRKVIDLRPGQAIGYNALGYSLADRNIRLQEAQELLEKAVSLAPDDPYIADSLG
WVKYRRGDLPAATDILRKAWAAAPQAEIGAHLGEVLWQSGKQDDARKVWTEAAKLDINDTTLRETLHRFSQPLPDAPTSA
N

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 70092; Mature: 69961

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPHAFSRQPATHRSGRFPRSRALLLASLLAAGLASLPAWAAAPATRTAQAAPEGSSRA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCE
AVQLEKSRPRGNLLATDRTDLPAVPLSEDIMYRVLASEVSLQRGLVEPAYRTYLGLAQDT
EEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
RDPRFAQRATEIAFLTRSPSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPML
CCHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
QAQLNKVSPGQRAEAILQLQQQMSKSNDPAGAVSALQRLTTHDAQRPETHLALARAKVVA
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEE
KDNTGALSELDTALKLRPGYEDAAILAAELRADSDPDAAISGLRTFLKAAPASIDGHLAL
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
ARMYLVRNQNDQARAEFEALRKIAPTDPRIPLALGLLNLQQRQYDSAEQYLKEYVAQAAK
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPSLSPEPGYQGLAQVAEEKRDYAGAITWLDKIAGASNGDGDGQVALAAGIKRAQLLGKL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
RRIDEAQQAFDELIADTEDVPDGPRRQALMDGIRQAEVGMLMDAKAYGRARARVNDLLRT
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
SPDSVEYTYQLSMLEEHDGHYDNMETLLRKVIDLRPGQAIGYNALGYSLADRNIRLQEAQ
CCCCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHH
ELLEKAVSLAPDDPYIADSLGWVKYRRGDLPAATDILRKAWAAAPQAEIGAHLGEVLWQS
HHHHHHHHCCCCCCCHHCCCCHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GKQDDARKVWTEAAKLDINDTTLRETLHRFSQPLPDAPTSAN
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TMPHAFSRQPATHRSGRFPRSRALLLASLLAAGLASLPAWAAAPATRTAQAAPEGSSRA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCE
AVQLEKSRPRGNLLATDRTDLPAVPLSEDIMYRVLASEVSLQRGLVEPAYRTYLGLAQDT
EEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
RDPRFAQRATEIAFLTRSPSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPML
CCHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
QAQLNKVSPGQRAEAILQLQQQMSKSNDPAGAVSALQRLTTHDAQRPETHLALARAKVVA
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEE
KDNTGALSELDTALKLRPGYEDAAILAAELRADSDPDAAISGLRTFLKAAPASIDGHLAL
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
ARMYLVRNQNDQARAEFEALRKIAPTDPRIPLALGLLNLQQRQYDSAEQYLKEYVAQAAK
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPSLSPEPGYQGLAQVAEEKRDYAGAITWLDKIAGASNGDGDGQVALAAGIKRAQLLGKL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
RRIDEAQQAFDELIADTEDVPDGPRRQALMDGIRQAEVGMLMDAKAYGRARARVNDLLRT
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
SPDSVEYTYQLSMLEEHDGHYDNMETLLRKVIDLRPGQAIGYNALGYSLADRNIRLQEAQ
CCCCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHH
ELLEKAVSLAPDDPYIADSLGWVKYRRGDLPAATDILRKAWAAAPQAEIGAHLGEVLWQS
HHHHHHHHCCCCCCCHHCCCCHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GKQDDARKVWTEAAKLDINDTTLRETLHRFSQPLPDAPTSAN
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]