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The map label for this gene is ycgM [C]

Identifier: 17545102

GI number: 17545102

Start: 411937

End: 412638

Strand: Direct

Name: ycgM [C]

Synonym: RSc0383

Alternate gene names: 17545102

Gene position: 411937-412638 (Clockwise)

Preceding gene: 17545096

Following gene: 17545103

Centisome position: 11.08

GC content: 70.37

Gene sequence:

>702_bases
ATGACCGATTTCGTCGTCACCCCGCCGGCCGTCACCGGCATTCCCGTCCGCGGCGCAGCCGGCGAGTTTCCGGTGCGCCG
CGTCTACTGCGTGGGCCGCAACTACGCCGCCCATGCGCGGGAAATGGGCTCCGACCCGGATCGCGAACCGCCGTTCTTCT
TCTGCAAGCCGGCCGATGCCGTGCGCTACGTCGCCGACGGCACCACCGGCCAGTTCGTCTATCCGACCGAGACCCGCGAT
TGCCACTACGAGATCGAGCTGGTCGTCGCCATCGGCACCGGCGGGCGCGACATCGCGGTGGAGTCGGCCGCCCAGCACAT
CTACGGCTACGCCATCGGCCTGGACATGACCCGCCGCGACCTGCAGAACGCCGCCAAGAAGGGCGGCCGCCCGTGGGAGA
CCGGCAAGGCCTTCGACGGCTCCGCCCCGATCGGCCCGATCGTGCCGGCCCAGACGGTGGCCAGCCCCGACCGCGGCGCC
ATCACGCTGTCGGTCAACGACAAGGCGCATCAGCACGGCGACCTGTCCGATCTGATCTGGTCGGTGCCGGAGACCATCGC
CTACCTGTCCCGCCTGTTCGAGCTGCGCCCCGGCGACCTGATCTTCACCGGCACGCCCGAGGGCGTCGGCCCGGTCTCGA
TCGGCGACCTGATGGTCGGCCGGATCGACGGCGTGGGCGAGCTGCACGTGAAGGTGGTGTGA

Upstream 100 bases:

>100_bases
GGGGCGGTGCGCAAGCGGGCAATGGCCACAGTGTATCCTCACTGCTTCGCTGGCGGCACGCAAGCCGCGGCCGACCGGAA
CATCACCTGAGGAGATCCGC

Downstream 100 bases:

>100_bases
GCGATGTCGATCAAGCTGTACAACTACTTCCGCAGCTCGGCGTCGTTCCGCGTGCGCATCGCGCTGGAGATCAAGGGCCT
GCCGTATGACTATGCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTDFVVTPPAVTGIPVRGAAGEFPVRRVYCVGRNYAAHAREMGSDPDREPPFFFCKPADAVRYVADGTTGQFVYPTETRD
CHYEIELVVAIGTGGRDIAVESAAQHIYGYAIGLDMTRRDLQNAAKKGGRPWETGKAFDGSAPIGPIVPAQTVASPDRGA
ITLSVNDKAHQHGDLSDLIWSVPETIAYLSRLFELRPGDLIFTGTPEGVGPVSIGDLMVGRIDGVGELHVKVV

Sequences:

>Translated_233_residues
MTDFVVTPPAVTGIPVRGAAGEFPVRRVYCVGRNYAAHAREMGSDPDREPPFFFCKPADAVRYVADGTTGQFVYPTETRD
CHYEIELVVAIGTGGRDIAVESAAQHIYGYAIGLDMTRRDLQNAAKKGGRPWETGKAFDGSAPIGPIVPAQTVASPDRGA
ITLSVNDKAHQHGDLSDLIWSVPETIAYLSRLFELRPGDLIFTGTPEGVGPVSIGDLMVGRIDGVGELHVKVV
>Mature_232_residues
TDFVVTPPAVTGIPVRGAAGEFPVRRVYCVGRNYAAHAREMGSDPDREPPFFFCKPADAVRYVADGTTGQFVYPTETRDC
HYEIELVVAIGTGGRDIAVESAAQHIYGYAIGLDMTRRDLQNAAKKGGRPWETGKAFDGSAPIGPIVPAQTVASPDRGAI
TLSVNDKAHQHGDLSDLIWSVPETIAYLSRLFELRPGDLIFTGTPEGVGPVSIGDLMVGRIDGVGELHVKVV

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=207, Percent_Identity=40.0966183574879, Blast_Score=158, Evalue=4e-39,
Organism=Homo sapiens, GI215422413, Length=200, Percent_Identity=40.5, Blast_Score=156, Evalue=1e-38,
Organism=Homo sapiens, GI66348062, Length=200, Percent_Identity=40.5, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI156231349, Length=256, Percent_Identity=31.25, Blast_Score=120, Evalue=9e-28,
Organism=Homo sapiens, GI40786394, Length=256, Percent_Identity=30.46875, Blast_Score=116, Evalue=2e-26,
Organism=Escherichia coli, GI1787428, Length=209, Percent_Identity=40.1913875598086, Blast_Score=161, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17557057, Length=192, Percent_Identity=35.4166666666667, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324161, Length=219, Percent_Identity=31.0502283105023, Blast_Score=113, Evalue=2e-26,
Organism=Drosophila melanogaster, GI28571789, Length=209, Percent_Identity=31.5789473684211, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI28572127, Length=216, Percent_Identity=31.0185185185185, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24663695, Length=215, Percent_Identity=26.046511627907, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 24980; Mature: 24848

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFVVTPPAVTGIPVRGAAGEFPVRRVYCVGRNYAAHAREMGSDPDREPPFFFCKPADA
CCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCC
VRYVADGTTGQFVYPTETRDCHYEIELVVAIGTGGRDIAVESAAQHIYGYAIGLDMTRRD
EEEEECCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEHHHHHHHHHEEEEEECCHHHHH
LQNAAKKGGRPWETGKAFDGSAPIGPIVPAQTVASPDRGAITLSVNDKAHQHGDLSDLIW
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCCCCCHHHHHH
SVPETIAYLSRLFELRPGDLIFTGTPEGVGPVSIGDLMVGRIDGVGELHVKVV
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHHEEEEEECCCCEEEEEEC
>Mature Secondary Structure 
TDFVVTPPAVTGIPVRGAAGEFPVRRVYCVGRNYAAHAREMGSDPDREPPFFFCKPADA
CCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCC
VRYVADGTTGQFVYPTETRDCHYEIELVVAIGTGGRDIAVESAAQHIYGYAIGLDMTRRD
EEEEECCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEHHHHHHHHHEEEEEECCHHHHH
LQNAAKKGGRPWETGKAFDGSAPIGPIVPAQTVASPDRGAITLSVNDKAHQHGDLSDLIW
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCCCCCHHHHHH
SVPETIAYLSRLFELRPGDLIFTGTPEGVGPVSIGDLMVGRIDGVGELHVKVV
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHHEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]