| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is coxC [H]
Identifier: 17545086
GI number: 17545086
Start: 395834
End: 396694
Strand: Direct
Name: coxC [H]
Synonym: RSc0367
Alternate gene names: 17545086
Gene position: 395834-396694 (Clockwise)
Preceding gene: 17545085
Following gene: 17545088
Centisome position: 10.65
GC content: 65.85
Gene sequence:
>861_bases ATGAGTGCGAATCGAGCGAACGCTCCGTACTACTTCGTGCCAGGGCCCTCGCGGCATCCGATTTCGGCGAGCATCGGCCT GCTGATCGTGCTGCTCAGCGCGGCGGCGTGGGTCAACGCGCAGCCGTGGGCGCCGTGGACCTTCCTGATCGGCCTGCTGT GGTTCCTGTTCGTGCTGCGCGCGTGGTTCGCCGACGCCATCTCCGAGTCCGAGGGCGGCCAGTACGGCGACCGCGTGGAC GCCTCGTTCCGTTGGTCGATGAGCTGGTTCATCTTCTCGGAAGTGATGTTCTTCGCCGCCTTCTTCGGCGCGCTGTTCTA TGCCCGCACCATTGCCATGCCGTGGCTGGGCGACCTGAACAACAAGCTGCTGTGGCCCGACTTCAACGCGCTGTGGCCGA ACGCCGGCCCGGCCGGCACGGTGCCGCCGTTCACGACGATGGGTCCGTGGCCGATCCCGACCATCAACACCGCGCTGCTG CTCACTTCCGGCGTGACGCTGACCTGGGCGCACCACGCGCTGCGCGAGGGCAAGCGGGCACAGGTCATCCAGGGCATGCT GCTGACGGTCATCCTGGGCGCCACGTTCATGTGCCTGCAGGCGTACGAATACATCCACGCCTACCACGAGCTGAACCTGA AGCTGACCTCGGGCATCTACGGCTCGACCTTCTTCATGCTGACCGGCTTCCACGGCTTCCACGTGACGATGGGCGCGATC ATGCTGGCGGTGGTGCTGGGCCGCGTGATCAAGGGGCACTTCACGCCGGAGCACCACTTCGCGTTCGAGGGCGCCGCCTG GTACTGGCACTTCGTGGACGTGGTCTGGCTCGGCCTGTACGTGGTGGTGTACTGGCTGTAG
Upstream 100 bases:
>100_bases CGTGCGGTGGTGGGTTGAGGAGGCGGTCCGGCGCGTCGCGCATCGCCGCGGCGCCGGGCGGATCGAGTGTGGTTCCAATA AGAGAGCTGGAGAACAAGAG
Downstream 100 bases:
>100_bases GCGGGCCCGGGGGCGGTCGCGCATGCGTCGCCCCTGTCGCATCGATGCCGCAGACGGGAAGCCGCTGCGGCGTTTTCATT TTTATCGGCCGAGCTGGATG
Product: cytochrome C oxidase subunit III transmembrane protein
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSANRANAPYYFVPGPSRHPISASIGLLIVLLSAAAWVNAQPWAPWTFLIGLLWFLFVLRAWFADAISESEGGQYGDRVD ASFRWSMSWFIFSEVMFFAAFFGALFYARTIAMPWLGDLNNKLLWPDFNALWPNAGPAGTVPPFTTMGPWPIPTINTALL LTSGVTLTWAHHALREGKRAQVIQGMLLTVILGATFMCLQAYEYIHAYHELNLKLTSGIYGSTFFMLTGFHGFHVTMGAI MLAVVLGRVIKGHFTPEHHFAFEGAAWYWHFVDVVWLGLYVVVYWL
Sequences:
>Translated_286_residues MSANRANAPYYFVPGPSRHPISASIGLLIVLLSAAAWVNAQPWAPWTFLIGLLWFLFVLRAWFADAISESEGGQYGDRVD ASFRWSMSWFIFSEVMFFAAFFGALFYARTIAMPWLGDLNNKLLWPDFNALWPNAGPAGTVPPFTTMGPWPIPTINTALL LTSGVTLTWAHHALREGKRAQVIQGMLLTVILGATFMCLQAYEYIHAYHELNLKLTSGIYGSTFFMLTGFHGFHVTMGAI MLAVVLGRVIKGHFTPEHHFAFEGAAWYWHFVDVVWLGLYVVVYWL >Mature_285_residues SANRANAPYYFVPGPSRHPISASIGLLIVLLSAAAWVNAQPWAPWTFLIGLLWFLFVLRAWFADAISESEGGQYGDRVDA SFRWSMSWFIFSEVMFFAAFFGALFYARTIAMPWLGDLNNKLLWPDFNALWPNAGPAGTVPPFTTMGPWPIPTINTALLL TSGVTLTWAHHALREGKRAQVIQGMLLTVILGATFMCLQAYEYIHAYHELNLKLTSGIYGSTFFMLTGFHGFHVTMGAIM LAVVLGRVIKGHFTPEHHFAFEGAAWYWHFVDVVWLGLYVVVYWL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=225, Percent_Identity=45.3333333333333, Blast_Score=168, Evalue=5e-42, Organism=Escherichia coli, GI1786633, Length=151, Percent_Identity=33.7748344370861, Blast_Score=71, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6226542, Length=227, Percent_Identity=35.2422907488987, Blast_Score=117, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32179; Mature: 32048
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANRANAPYYFVPGPSRHPISASIGLLIVLLSAAAWVNAQPWAPWTFLIGLLWFLFVLR CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH AWFADAISESEGGQYGDRVDASFRWSMSWFIFSEVMFFAAFFGALFYARTIAMPWLGDLN HHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NKLLWPDFNALWPNAGPAGTVPPFTTMGPWPIPTINTALLLTSGVTLTWAHHALREGKRA CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHH QVIQGMLLTVILGATFMCLQAYEYIHAYHELNLKLTSGIYGSTFFMLTGFHGFHVTMGAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCHHHHHHHHH MLAVVLGRVIKGHFTPEHHFAFEGAAWYWHFVDVVWLGLYVVVYWL HHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SANRANAPYYFVPGPSRHPISASIGLLIVLLSAAAWVNAQPWAPWTFLIGLLWFLFVLR CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH AWFADAISESEGGQYGDRVDASFRWSMSWFIFSEVMFFAAFFGALFYARTIAMPWLGDLN HHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NKLLWPDFNALWPNAGPAGTVPPFTTMGPWPIPTINTALLLTSGVTLTWAHHALREGKRA CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHH QVIQGMLLTVILGATFMCLQAYEYIHAYHELNLKLTSGIYGSTFFMLTGFHGFHVTMGAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCHHHHHHHHH MLAVVLGRVIKGHFTPEHHFAFEGAAWYWHFVDVVWLGLYVVVYWL HHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]