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The map label for this gene is ctpA [H]

Identifier: 17545071

GI number: 17545071

Start: 383542

End: 385191

Strand: Reverse

Name: ctpA [H]

Synonym: RSc0352

Alternate gene names: 17545071

Gene position: 385191-383542 (Counterclockwise)

Preceding gene: 17545072

Following gene: 17545070

Centisome position: 10.36

GC content: 65.21

Gene sequence:

>1650_bases
ATGTTTATCCATTTCTACGTTCCCAACGTCCGCCCTCGACTCATGCGAACTTCGCTCAAGAACATCAGCCTGATCGCCAT
CGGCCTCGTGACCGGCGTGCTGGCGACGCTCCAGCTTTCCGCCACCGCGCAGAACGCGACGGTCGGGCCGCTGCCGCTGG
AAAAGCTCCGGCTGATGGCCGACATCTTCGGGCAGATCAAGCGCGAATACGTCGAACCGGTGGACGACGACAAACTGCTG
ACCGAAGCCATCAAGGGCATGGTCGCCAGCCTCGATCCGCATTCGGCCTACCTCGACAAGAAAGACTTCCAGGAACTGCA
GGAAGGCACCCAGGGCCGCTTCGCCGGACTGGGCATCGAAATCTCGCAGGAAGAAGGCCTGGTCAAGGTCATCAACCCGA
TTGAAGACACGCCCGCCTTCCGCGCCGGCGTCCAGCCGGGCGACCTGATCACCCGCATCGACGACAAGCCCGTGCGCGGC
ATGCCGCTGGAACAGGCGGTCAAGCGCATGCGCGGCGCCCCGGGCACCAAGGTCACGCTGACCATCTACCGCAAGAAGGA
AGAGCGCACCTTCCCGCTCACCATCACGCGCGCCGAAATCCAGGTGCAATCGGTCAAGGCCAAGCTGCTGGGCGACGGCA
TCGCCTGGGTGCGCATCACCAGCTTCCAGGAACGCACGGTACCGGACCTGGCCAAGAAGCTGAATGACCTGGCACACCAA
GATGCGCGCCTCAAGGGCGTGATCCTCGATCTGCGCAACAACGGTGGCGGCGTGTTGCAGGCGGCCGTGGGCGTATCGGC
GGCGTTCCTGCCCCCGGACGTGACGGTGGTCTCGACCAACGGCCAGGTGCCGGACGCCAAGCGCGTGTACAAGACGAGCT
TCGCGAACTACCGCCTGAGCAATTTCGACACCGATCCGCTGGTGAGCCTGGACCCCGAGTTCAAGACCGTGCCGATCGTG
GTGCTGACCAACGCCTACACCGCCTCGGCCTCCGAGATCGTGGCCGGCGCGCTGCAGGATCACCATCGCGCCAAGGTGAT
GGGCAAGACCACCTTTGGCAAGGGTTCGGTGCAGACGGTGCGCCCGCTGTCGAACGACACCGGCATCAAGCTGACCATCG
CGTACTACTACACGCCGTCGGGCAAATCGATCCAGGCCAAGGGCATCCGCCCCGACGTGCCGGTCGACCAGAGCCCCGAA
GGCGATCCGGACGACGCGCTGATCACCCGCGAGATCGACACCGAGCGCCACCTGCACAACAAGCAGGAGTCGGAAGAACC
CGAGATGACCGATCGCGAGAAGCGCCGCGTCGAAGAGCTGCGCCGCCTGGAAGAAGAAACCGCCAAGAAGACGCCCGAGC
AGCGCGAGAAGGAACGCAACAAGAAGCCGATCGAGTTCGGCTCGACCGACGACTTCATGTTGCAGCAGGCCGTCGCCGAG
CTGAAGGGCCAGCCGGTCAAGCGCTCCAAGTCGGTGCTGGAGGCCGCTGCGGCCGTCCCGGACAAGGCGACGAAATCGCC
GGCCGCGAAGGAGTCGAGCGCACCGGCCAAGCTGCCCAAGGGCAAGGCCGCTCCGGCATCCGAACCGGCCGCGCCCTCGG
GTCCGGCCAGCGGTGTGATTCCGGCACCGGAACCCACCGGCGCACGATAA

Upstream 100 bases:

>100_bases
GAAATAAAGCGTAACCGCCGGGCGTAACGGCGCAGGGCACTTCCAACGCCTTTATACTGTCGAAACGCCAGCCCGGGACA
CGCACCAGCGGTCCCGGGCC

Downstream 100 bases:

>100_bases
GCCCGCATCCGCCAGGACTGGCAACTGGCAAGGCCGTGCACCGCACGGCCTTTTTCATTCCCGACGCGCCATGAACGACA
ACCAACTGCTGCGCTACTCC

Product: carboxy-terminal processing protease transmembrane protein

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MFIHFYVPNVRPRLMRTSLKNISLIAIGLVTGVLATLQLSATAQNATVGPLPLEKLRLMADIFGQIKREYVEPVDDDKLL
TEAIKGMVASLDPHSAYLDKKDFQELQEGTQGRFAGLGIEISQEEGLVKVINPIEDTPAFRAGVQPGDLITRIDDKPVRG
MPLEQAVKRMRGAPGTKVTLTIYRKKEERTFPLTITRAEIQVQSVKAKLLGDGIAWVRITSFQERTVPDLAKKLNDLAHQ
DARLKGVILDLRNNGGGVLQAAVGVSAAFLPPDVTVVSTNGQVPDAKRVYKTSFANYRLSNFDTDPLVSLDPEFKTVPIV
VLTNAYTASASEIVAGALQDHHRAKVMGKTTFGKGSVQTVRPLSNDTGIKLTIAYYYTPSGKSIQAKGIRPDVPVDQSPE
GDPDDALITREIDTERHLHNKQESEEPEMTDREKRRVEELRRLEEETAKKTPEQREKERNKKPIEFGSTDDFMLQQAVAE
LKGQPVKRSKSVLEAAAAVPDKATKSPAAKESSAPAKLPKGKAAPASEPAAPSGPASGVIPAPEPTGAR

Sequences:

>Translated_549_residues
MFIHFYVPNVRPRLMRTSLKNISLIAIGLVTGVLATLQLSATAQNATVGPLPLEKLRLMADIFGQIKREYVEPVDDDKLL
TEAIKGMVASLDPHSAYLDKKDFQELQEGTQGRFAGLGIEISQEEGLVKVINPIEDTPAFRAGVQPGDLITRIDDKPVRG
MPLEQAVKRMRGAPGTKVTLTIYRKKEERTFPLTITRAEIQVQSVKAKLLGDGIAWVRITSFQERTVPDLAKKLNDLAHQ
DARLKGVILDLRNNGGGVLQAAVGVSAAFLPPDVTVVSTNGQVPDAKRVYKTSFANYRLSNFDTDPLVSLDPEFKTVPIV
VLTNAYTASASEIVAGALQDHHRAKVMGKTTFGKGSVQTVRPLSNDTGIKLTIAYYYTPSGKSIQAKGIRPDVPVDQSPE
GDPDDALITREIDTERHLHNKQESEEPEMTDREKRRVEELRRLEEETAKKTPEQREKERNKKPIEFGSTDDFMLQQAVAE
LKGQPVKRSKSVLEAAAAVPDKATKSPAAKESSAPAKLPKGKAAPASEPAAPSGPASGVIPAPEPTGAR
>Mature_549_residues
MFIHFYVPNVRPRLMRTSLKNISLIAIGLVTGVLATLQLSATAQNATVGPLPLEKLRLMADIFGQIKREYVEPVDDDKLL
TEAIKGMVASLDPHSAYLDKKDFQELQEGTQGRFAGLGIEISQEEGLVKVINPIEDTPAFRAGVQPGDLITRIDDKPVRG
MPLEQAVKRMRGAPGTKVTLTIYRKKEERTFPLTITRAEIQVQSVKAKLLGDGIAWVRITSFQERTVPDLAKKLNDLAHQ
DARLKGVILDLRNNGGGVLQAAVGVSAAFLPPDVTVVSTNGQVPDAKRVYKTSFANYRLSNFDTDPLVSLDPEFKTVPIV
VLTNAYTASASEIVAGALQDHHRAKVMGKTTFGKGSVQTVRPLSNDTGIKLTIAYYYTPSGKSIQAKGIRPDVPVDQSPE
GDPDDALITREIDTERHLHNKQESEEPEMTDREKRRVEELRRLEEETAKKTPEQREKERNKKPIEFGSTDDFMLQQAVAE
LKGQPVKRSKSVLEAAAAVPDKATKSPAAKESSAPAKLPKGKAAPASEPAAPSGPASGVIPAPEPTGAR

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=396, Percent_Identity=28.5353535353535, Blast_Score=123, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 59832; Mature: 59832

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIHFYVPNVRPRLMRTSLKNISLIAIGLVTGVLATLQLSATAQNATVGPLPLEKLRLMA
CEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
DIFGQIKREYVEPVDDDKLLTEAIKGMVASLDPHSAYLDKKDFQELQEGTQGRFAGLGIE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCEEEECEE
ISQEEGLVKVINPIEDTPAFRAGVQPGDLITRIDDKPVRGMPLEQAVKRMRGAPGTKVTL
ECCCCCEEEECCCCCCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEE
TIYRKKEERTFPLTITRAEIQVQSVKAKLLGDGIAWVRITSFQERTVPDLAKKLNDLAHQ
EEEEECCCCCCCEEEEEHHEEHHHHHHHHHCCCEEEEEEECCHHCCHHHHHHHHHHHHHC
DARLKGVILDLRNNGGGVLQAAVGVSAAFLPPDVTVVSTNGQVPDAKRVYKTSFANYRLS
CCCEEEEEEEEECCCCCEEEHHHCCEEEECCCCEEEEECCCCCCCHHHHHHHHHCCEEEC
NFDTDPLVSLDPEFKTVPIVVLTNAYTASASEIVAGALQDHHRAKVMGKTTFGKGSVQTV
CCCCCCCEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEE
RPLSNDTGIKLTIAYYYTPSGKSIQAKGIRPDVPVDQSPEGDPDDALITREIDTERHLHN
CCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHCC
KQESEEPEMTDREKRRVEELRRLEEETAKKTPEQREKERNKKPIEFGSTDDFMLQQAVAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LKGQPVKRSKSVLEAAAAVPDKATKSPAAKESSAPAKLPKGKAAPASEPAAPSGPASGVI
HCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPEPTGAR
CCCCCCCCC
>Mature Secondary Structure
MFIHFYVPNVRPRLMRTSLKNISLIAIGLVTGVLATLQLSATAQNATVGPLPLEKLRLMA
CEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
DIFGQIKREYVEPVDDDKLLTEAIKGMVASLDPHSAYLDKKDFQELQEGTQGRFAGLGIE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCEEEECEE
ISQEEGLVKVINPIEDTPAFRAGVQPGDLITRIDDKPVRGMPLEQAVKRMRGAPGTKVTL
ECCCCCEEEECCCCCCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEE
TIYRKKEERTFPLTITRAEIQVQSVKAKLLGDGIAWVRITSFQERTVPDLAKKLNDLAHQ
EEEEECCCCCCCEEEEEHHEEHHHHHHHHHCCCEEEEEEECCHHCCHHHHHHHHHHHHHC
DARLKGVILDLRNNGGGVLQAAVGVSAAFLPPDVTVVSTNGQVPDAKRVYKTSFANYRLS
CCCEEEEEEEEECCCCCEEEHHHCCEEEECCCCEEEEECCCCCCCHHHHHHHHHCCEEEC
NFDTDPLVSLDPEFKTVPIVVLTNAYTASASEIVAGALQDHHRAKVMGKTTFGKGSVQTV
CCCCCCCEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCEEE
RPLSNDTGIKLTIAYYYTPSGKSIQAKGIRPDVPVDQSPEGDPDDALITREIDTERHLHN
CCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHCC
KQESEEPEMTDREKRRVEELRRLEEETAKKTPEQREKERNKKPIEFGSTDDFMLQQAVAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LKGQPVKRSKSVLEAAAAVPDKATKSPAAKESSAPAKLPKGKAAPASEPAAPSGPASGVI
HCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPEPTGAR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]