Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is plcN [H]

Identifier: 17545038

GI number: 17545038

Start: 349719

End: 351821

Strand: Direct

Name: plcN [H]

Synonym: RSc0319

Alternate gene names: 17545038

Gene position: 349719-351821 (Clockwise)

Preceding gene: 17545037

Following gene: 17545039

Centisome position: 9.41

GC content: 68.62

Gene sequence:

>2103_bases
ATGACGTCAAACAGCCGCCGTGGTTTTCTCCGTTCCGCTGCCCAGTTGGCTGGCGCCGCCGCCGCGATGGGCGCGATGCC
CGCCGGTATCCGGCAGGCGCTCGCGATTCCGGCCTACAACGCCCGCCGCAGCATTGAAGACGTCCAGCACATCGTGATCC
TGATGCAGGAAAACCGCGCGTTCGACCACTACTTCGGCACGCTGCGCGGCGTGCGCGGGTATGGCGACACGCGCACCATC
ACGCTGCCCTCGGGCAAGCCGGTCTGGCACCAGCCGCTGGCCGGCGGCGTGGGCGAAGTCCTGCCGTTCCGCCCGGGTGC
GCCGGACCTCGGCCTGCAGTTCCTGCAAGACCTGCCGCACGGCTGGAACGACACGCACGCCGCCGTCAACGGCGGCCGCT
ACGACGGCTGGGTGCCACACAAGGGCACCACCACCATGGCCTACCTGACGCGCCAGGACATCCCGTTCCACTACGCGCTG
GCCGACGCCTTCACCCTTTGCGACGCCTACCATTGCTCGACGCCGACCTCGACCGATCCCAACCGCTACTACATGTGGAC
CGGCTACGTCGGCAACGACGGCGCGGGCGGCGGGCCGGTCATCGACAATGCCGAGCTGGGCTACGGCTGGTCCACCTATC
CCGAGGTGCTGGAGCGCGCCGGCATCTCGTGGAAGATCTACCAGGACGTCGGCACCGGCCTCGACGCCAATGGCGCGTGG
GGCTGGACCAGCGATGCCTACATCGGCAACTACGGCGACAACTCGCTGCTCTACTTCAAGCAGTACCAGAACGCGCAACC
GGGCAACCCGCTGTACGACAAGGCGCGCACCGGCACCAACGTGTCGGCCGGCGACGGCTACTTCGACATCCTCAAGCGCG
ACGTGCAGAACGGCGCGCTGCCGCAGGTGTCGTGGATCGCCGCGCCCGAGGCCTTCTCCGAGCATCCGAACTGGCCGGCC
AACTACGGCGCGTGGTACATCGACCAGGTCCTGCAGATCCTCACGTCCAACCCCGAGGTGTGGAGCAAGACGGTGCTGCT
GGTCACCTACGACGAGAACGACGGCTTCTTCGACCATCTCGTTCCGCCGTTTGCCGCGTCGGGCGGCAACGGCCTGTCGA
CGGTCGATACCGGCGGTGAATCGTTCCCCGGCAGCAGCCAGTACGTGCCGGGCAGCTATGGCCTGGGTCAGCGCGTGCCG
ATGCTGGTGGTCTCGCCGTGGTCGAAGGGCGGCTGGGTGTGCTCGCAGACCTTCGACCACACCTCGATCATCCGCTTCAT
CGAGCAGCGCTTTGCCCGCACGCACGACGTGGTCTCACCGAACATCTCGAAGTGGCGGCGCACGGTGTGCGGCGATCTCA
CCGCCGCGTTCAACTTCGCCGACCCGAACGGCGCGGTGCCCGCGCTGCCGGGCACGTCCGCGTATGCGCCCGGGGACCGC
CAGCGCCATCCCGACTACATCCCGCTGCCGCCGCTGGTGCAGTCGGTGCCGAAGCAGGAAGCCGGCGTGCGCCCGGCACG
CGCACTGCCGTACGAACTGTTCGTGCGCGGCCGCCATGACGAAGCCGCCGGCCGGTTCCAGATCGACTTCGTCAACACCG
GCGAGGCCGGCGCAGCCTTCCTCGTCTACGTGGCCGGCAGCCCGGATGCGCCGCGCAGCTACACGGTCGAGGCCGGCAAG
CGCCTGTCCGACAAGCTGCCGGTCAATGCCGGCGGCACGTACGATTTCACCGTGCACGGGCCGAACGGCTTCCTGCGCCG
CTTTGTCGGCAAGCTGTCGCTGTCCGGCCTGCTGCATCCGCATGGCCAAGCGCTGGAGGTCAAAGAAAGCTACGACGTCG
CCAACGGCAACCTGGAACTGCGCCTGATCAACCACGGGCGCGCGCCGAGCACCGTCACCCTCAAGAGCGCTTACACGGGG
GCCGCGGTGCAGCGCGTAGTGCGCGGCGGCGACGATGCATCGGTGTACCTGGACCTGCGCGGCGAGCACGGCTGGTATGA
CCTGACCGTCACCGCCAGCACCGATGCCGGCTTCCGGCGCCGCCTGGCCGGACACGTCGAGACCGGCCGCGCCAGTATGT
CGGACCCCGCACTCGGTGCGTGA

Upstream 100 bases:

>100_bases
CCCATCTGCCCGCCCGCGACGGCCTGGCGCTGCCCGTGATGCATACCGTGGACTGATCCCGTCCGCCTGCCGGTTTCCCC
CCGCACAAGAGGTGCTCAGC

Downstream 100 bases:

>100_bases
GATGGTTTAAAGGGTCGTAGGCGGCACTCGGCAGGTCCGCTGGCGGATGACGTCGGCGGACCTTTCTTTTTTTTCTTGCC
GCATCGCTGCAGGGCGCATG

Product: non-hemolytic phospholipase C signal peptide protein

Products: NA

Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]

Number of amino acids: Translated: 700; Mature: 699

Protein sequence:

>700_residues
MTSNSRRGFLRSAAQLAGAAAAMGAMPAGIRQALAIPAYNARRSIEDVQHIVILMQENRAFDHYFGTLRGVRGYGDTRTI
TLPSGKPVWHQPLAGGVGEVLPFRPGAPDLGLQFLQDLPHGWNDTHAAVNGGRYDGWVPHKGTTTMAYLTRQDIPFHYAL
ADAFTLCDAYHCSTPTSTDPNRYYMWTGYVGNDGAGGGPVIDNAELGYGWSTYPEVLERAGISWKIYQDVGTGLDANGAW
GWTSDAYIGNYGDNSLLYFKQYQNAQPGNPLYDKARTGTNVSAGDGYFDILKRDVQNGALPQVSWIAAPEAFSEHPNWPA
NYGAWYIDQVLQILTSNPEVWSKTVLLVTYDENDGFFDHLVPPFAASGGNGLSTVDTGGESFPGSSQYVPGSYGLGQRVP
MLVVSPWSKGGWVCSQTFDHTSIIRFIEQRFARTHDVVSPNISKWRRTVCGDLTAAFNFADPNGAVPALPGTSAYAPGDR
QRHPDYIPLPPLVQSVPKQEAGVRPARALPYELFVRGRHDEAAGRFQIDFVNTGEAGAAFLVYVAGSPDAPRSYTVEAGK
RLSDKLPVNAGGTYDFTVHGPNGFLRRFVGKLSLSGLLHPHGQALEVKESYDVANGNLELRLINHGRAPSTVTLKSAYTG
AAVQRVVRGGDDASVYLDLRGEHGWYDLTVTASTDAGFRRRLAGHVETGRASMSDPALGA

Sequences:

>Translated_700_residues
MTSNSRRGFLRSAAQLAGAAAAMGAMPAGIRQALAIPAYNARRSIEDVQHIVILMQENRAFDHYFGTLRGVRGYGDTRTI
TLPSGKPVWHQPLAGGVGEVLPFRPGAPDLGLQFLQDLPHGWNDTHAAVNGGRYDGWVPHKGTTTMAYLTRQDIPFHYAL
ADAFTLCDAYHCSTPTSTDPNRYYMWTGYVGNDGAGGGPVIDNAELGYGWSTYPEVLERAGISWKIYQDVGTGLDANGAW
GWTSDAYIGNYGDNSLLYFKQYQNAQPGNPLYDKARTGTNVSAGDGYFDILKRDVQNGALPQVSWIAAPEAFSEHPNWPA
NYGAWYIDQVLQILTSNPEVWSKTVLLVTYDENDGFFDHLVPPFAASGGNGLSTVDTGGESFPGSSQYVPGSYGLGQRVP
MLVVSPWSKGGWVCSQTFDHTSIIRFIEQRFARTHDVVSPNISKWRRTVCGDLTAAFNFADPNGAVPALPGTSAYAPGDR
QRHPDYIPLPPLVQSVPKQEAGVRPARALPYELFVRGRHDEAAGRFQIDFVNTGEAGAAFLVYVAGSPDAPRSYTVEAGK
RLSDKLPVNAGGTYDFTVHGPNGFLRRFVGKLSLSGLLHPHGQALEVKESYDVANGNLELRLINHGRAPSTVTLKSAYTG
AAVQRVVRGGDDASVYLDLRGEHGWYDLTVTASTDAGFRRRLAGHVETGRASMSDPALGA
>Mature_699_residues
TSNSRRGFLRSAAQLAGAAAAMGAMPAGIRQALAIPAYNARRSIEDVQHIVILMQENRAFDHYFGTLRGVRGYGDTRTIT
LPSGKPVWHQPLAGGVGEVLPFRPGAPDLGLQFLQDLPHGWNDTHAAVNGGRYDGWVPHKGTTTMAYLTRQDIPFHYALA
DAFTLCDAYHCSTPTSTDPNRYYMWTGYVGNDGAGGGPVIDNAELGYGWSTYPEVLERAGISWKIYQDVGTGLDANGAWG
WTSDAYIGNYGDNSLLYFKQYQNAQPGNPLYDKARTGTNVSAGDGYFDILKRDVQNGALPQVSWIAAPEAFSEHPNWPAN
YGAWYIDQVLQILTSNPEVWSKTVLLVTYDENDGFFDHLVPPFAASGGNGLSTVDTGGESFPGSSQYVPGSYGLGQRVPM
LVVSPWSKGGWVCSQTFDHTSIIRFIEQRFARTHDVVSPNISKWRRTVCGDLTAAFNFADPNGAVPALPGTSAYAPGDRQ
RHPDYIPLPPLVQSVPKQEAGVRPARALPYELFVRGRHDEAAGRFQIDFVNTGEAGAAFLVYVAGSPDAPRSYTVEAGKR
LSDKLPVNAGGTYDFTVHGPNGFLRRFVGKLSLSGLLHPHGQALEVKESYDVANGNLELRLINHGRAPSTVTLKSAYTGA
AVQRVVRGGDDASVYLDLRGEHGWYDLTVTASTDAGFRRRLAGHVETGRASMSDPALGA

Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]

COG id: COG3511

COG function: function code M; Phospholipase C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial phospholipase C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007312
- InterPro:   IPR008475
- InterPro:   IPR017767
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]

EC number: =3.1.4.3 [H]

Molecular weight: Translated: 75856; Mature: 75725

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNSRRGFLRSAAQLAGAAAAMGAMPAGIRQALAIPAYNARRSIEDVQHIVILMQENRA
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHEEEEEEEECCCC
FDHYFGTLRGVRGYGDTRTITLPSGKPVWHQPLAGGVGEVLPFRPGAPDLGLQFLQDLPH
HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
GWNDTHAAVNGGRYDGWVPHKGTTTMAYLTRQDIPFHYALADAFTLCDAYHCSTPTSTDP
CCCCCHHEECCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCC
NRYYMWTGYVGNDGAGGGPVIDNAELGYGWSTYPEVLERAGISWKIYQDVGTGLDANGAW
CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHCCCCCCCCCC
GWTSDAYIGNYGDNSLLYFKQYQNAQPGNPLYDKARTGTNVSAGDGYFDILKRDVQNGAL
CCCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
PQVSWIAAPEAFSEHPNWPANYGAWYIDQVLQILTSNPEVWSKTVLLVTYDENDGFFDHL
CCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHC
VPPFAASGGNGLSTVDTGGESFPGSSQYVPGSYGLGQRVPMLVVSPWSKGGWVCSQTFDH
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCH
TSIIRFIEQRFARTHDVVSPNISKWRRTVCGDLTAAFNFADPNGAVPALPGTSAYAPGDR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC
QRHPDYIPLPPLVQSVPKQEAGVRPARALPYELFVRGRHDEAAGRFQIDFVNTGEAGAAF
CCCCCCCCCCHHHHHCCHHHCCCCCHHCCCHHHEEECCCCCCCCEEEEEEEECCCCCCEE
LVYVAGSPDAPRSYTVEAGKRLSDKLPVNAGGTYDFTVHGPNGFLRRFVGKLSLSGLLHP
EEEEECCCCCCCCEEHHHCCCHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCC
HGQALEVKESYDVANGNLELRLINHGRAPSTVTLKSAYTGAAVQRVVRGGDDASVYLDLR
CCCEEEEHHCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEC
GEHGWYDLTVTASTDAGFRRRLAGHVETGRASMSDPALGA
CCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSNSRRGFLRSAAQLAGAAAAMGAMPAGIRQALAIPAYNARRSIEDVQHIVILMQENRA
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHEEEEEEEECCCC
FDHYFGTLRGVRGYGDTRTITLPSGKPVWHQPLAGGVGEVLPFRPGAPDLGLQFLQDLPH
HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
GWNDTHAAVNGGRYDGWVPHKGTTTMAYLTRQDIPFHYALADAFTLCDAYHCSTPTSTDP
CCCCCHHEECCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCCCCC
NRYYMWTGYVGNDGAGGGPVIDNAELGYGWSTYPEVLERAGISWKIYQDVGTGLDANGAW
CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHCCCCCCCCCC
GWTSDAYIGNYGDNSLLYFKQYQNAQPGNPLYDKARTGTNVSAGDGYFDILKRDVQNGAL
CCCCCCEEECCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
PQVSWIAAPEAFSEHPNWPANYGAWYIDQVLQILTSNPEVWSKTVLLVTYDENDGFFDHL
CCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHC
VPPFAASGGNGLSTVDTGGESFPGSSQYVPGSYGLGQRVPMLVVSPWSKGGWVCSQTFDH
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCH
TSIIRFIEQRFARTHDVVSPNISKWRRTVCGDLTAAFNFADPNGAVPALPGTSAYAPGDR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC
QRHPDYIPLPPLVQSVPKQEAGVRPARALPYELFVRGRHDEAAGRFQIDFVNTGEAGAAF
CCCCCCCCCCHHHHHCCHHHCCCCCHHCCCHHHEEECCCCCCCCEEEEEEEECCCCCCEE
LVYVAGSPDAPRSYTVEAGKRLSDKLPVNAGGTYDFTVHGPNGFLRRFVGKLSLSGLLHP
EEEEECCCCCCCCEEHHHCCCHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCC
HGQALEVKESYDVANGNLELRLINHGRAPSTVTLKSAYTGAAVQRVVRGGDDASVYLDLR
CCCEEEEHHCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEC
GEHGWYDLTVTASTDAGFRRRLAGHVETGRASMSDPALGA
CCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10523590 [H]