| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545037
Identifier: 17545037
GI number: 17545037
Start: 349408
End: 349674
Strand: Direct
Name: 17545037
Synonym: RSc0318
Alternate gene names: NA
Gene position: 349408-349674 (Clockwise)
Preceding gene: 17545036
Following gene: 17545038
Centisome position: 9.4
GC content: 76.03
Gene sequence:
>267_bases GTGTCCGTAAGCCACCGTCGTGCCCGCGCGTGCCGCTTGCGCGCGCGACATGCCCTGCTGCGCGCCTTGTCGATGCTGGC TCCCGTCGGCATGGGCGCGGGCCTGGGCGCTTGCGGCGAAGCGACGGACACGCATGTCCCCGCGGTGGTGCGCGGCGCGC AGCCGATCACGGCCGGCCCGGCCACGCTGCCCGCGGCCGCCGCTCCCGATGCCCATCTGCCCGCCCGCGACGGCCTGGCG CTGCCCGTGATGCATACCGTGGACTGA
Upstream 100 bases:
>100_bases GCCTTCATGCCGTCGACACGAAGCCTCCCTAACTTGACGTGACACGCTACGCCGATCGCGACGCCCGCGCTTCGCGATCG GCCGCCTTGGGAGGATTGCC
Downstream 100 bases:
>100_bases TCCCGTCCGCCTGCCGGTTTCCCCCCGCACAAGAGGTGCTCAGCATGACGTCAAACAGCCGCCGTGGTTTTCTCCGTTCC GCTGCCCAGTTGGCTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSVSHRRARACRLRARHALLRALSMLAPVGMGAGLGACGEATDTHVPAVVRGAQPITAGPATLPAAAAPDAHLPARDGLA LPVMHTVD
Sequences:
>Translated_88_residues MSVSHRRARACRLRARHALLRALSMLAPVGMGAGLGACGEATDTHVPAVVRGAQPITAGPATLPAAAAPDAHLPARDGLA LPVMHTVD >Mature_87_residues SVSHRRARACRLRARHALLRALSMLAPVGMGAGLGACGEATDTHVPAVVRGAQPITAGPATLPAAAAPDAHLPARDGLAL PVMHTVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8919; Mature: 8787
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSHRRARACRLRARHALLRALSMLAPVGMGAGLGACGEATDTHVPAVVRGAQPITAGP CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC ATLPAAAAPDAHLPARDGLALPVMHTVD CCCCCCCCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure SVSHRRARACRLRARHALLRALSMLAPVGMGAGLGACGEATDTHVPAVVRGAQPITAGP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC ATLPAAAAPDAHLPARDGLALPVMHTVD CCCCCCCCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA