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The map label for this gene is 17545025

Identifier: 17545025

GI number: 17545025

Start: 337709

End: 338884

Strand: Direct

Name: 17545025

Synonym: RSc0306

Alternate gene names: NA

Gene position: 337709-338884 (Clockwise)

Preceding gene: 17545024

Following gene: 17545027

Centisome position: 9.09

GC content: 71.94

Gene sequence:

>1176_bases
ATGGATTCGACCGCGCTACTGTTGATGGGAGGTGGATCGCGCGCCGCCTACCAGGCGGGCGTGCTGCGCGGCATCGCGCG
GCTGGCGCGCGAGTGTGCGCCGGATGCGGTGGGCTCGCCGTTCGACGTGATCTGCGGAACGTCGGCCGGCGCCATCAACG
GCGTCGGGCTGGCGCGCGGCGCACAGGATTTCCTGCAGGCCACCGAGGCGCTGGTGCAACTGTGGGCCAAGCTCCATGCC
GACCGCGTGTACCGCACCGATGTCGGCCGCGTTGGCGCCAGCGGCGCGCGCTGGCTGACGGCGCTGGCCTTCGGCTGGAT
GACCGGCCGCACCCCGCGCGCCCTGTTCGACAACACGCCGCTGCGCGAACTGCTGCTGGAGCAGCACGATGCGCAGCAAC
TGCAGGCGGCCTTCGATGCCGGCGCCCTGCGCGCGCTGGCGGTCACGGCCCTCAGCTACACCACGGGGCGCCATGTCACG
TTCTATCAGTCGCCGCATGTCGTGCTGCCGTGGCGGCGCTCGCAGCGGATCGCCGTGACCGACACGATCGGCGTGCCGCA
CCTGCTGGCCTCGTCGAGCATCCCTTTCCTGTTTCCCGCCGAGCCCGTGCAGCTCGAGGGCAACGACGAATGGTTCGGCG
ACGGCACGATGCGGCAGATGTCGCCGCTGTCGCCCGCCATCCACCTGGGCGCGAGCCGCATCCTCGTGGTGGGGGCGGCC
TCGCGCCAGCAGCCGGGGTGGTACGACACGGTGCCGGCATCGGGCTACCCGTCGCTGGCGCAGGTGGCGGGGCAGGCGCT
GGCGAGCGTGTTCCTCGACGGGCTGTCGGCCGACATCGAGCGGCTGCAGCACGTCAACGCCATGGTCAGCCGCAACCCCG
AGATCGCCGATGCGCGCGACGGCTGGCGCAAGATCGAAGTGCTGGTGATGTCGCCGTCCGAGCGCATCGAGCTGATCGCC
GCCCGCCATGTGCAGCGGCTGCCCGGCACCGTGCGCGCGCTGCTCAGGCCGCTGGGCGGCACCGAGGCGCGCGGCGCGGC
CTTCGCCAGCTATCTGCTGTTCGAGCCGGAGTTCACCCGTGAGCTGATCGACCTCGGCGAGCGCGATGCGCTGGCCCGCC
GCGACGAACTGGCCGCCTTCCTGTACGGCGTGGTGCCGGACACGATGGCGGCCTGA

Upstream 100 bases:

>100_bases
CGGGAAGGCGGCCGCGAAGAAGAAGGCCCCGGTCAAGGCCGCCGCGCCCAAGCCGACATCCGATGCGTCCTGATCCTCGC
GCTTGCACCAACCCGCACGC

Downstream 100 bases:

>100_bases
GCCGGCGCTCAGCGGGGCGCCGGTTCGGCGAGCAGGGCGTCGATGCGCTTGATGAGGGCCGGATCGCCCGGCTCGACCTT
GCTCGGGTACACCGCCACTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phospholipase Patatin Family; Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Patatin Like Phospholipase; Patatin-Like Phospholipase Family; Alpha/Beta Hydrolase; Patatin-Like Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Phospholipase; Alpha-Beta Hydrolase Superfamily Protein; Patatin Family Phospholipase

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MDSTALLLMGGGSRAAYQAGVLRGIARLARECAPDAVGSPFDVICGTSAGAINGVGLARGAQDFLQATEALVQLWAKLHA
DRVYRTDVGRVGASGARWLTALAFGWMTGRTPRALFDNTPLRELLLEQHDAQQLQAAFDAGALRALAVTALSYTTGRHVT
FYQSPHVVLPWRRSQRIAVTDTIGVPHLLASSSIPFLFPAEPVQLEGNDEWFGDGTMRQMSPLSPAIHLGASRILVVGAA
SRQQPGWYDTVPASGYPSLAQVAGQALASVFLDGLSADIERLQHVNAMVSRNPEIADARDGWRKIEVLVMSPSERIELIA
ARHVQRLPGTVRALLRPLGGTEARGAAFASYLLFEPEFTRELIDLGERDALARRDELAAFLYGVVPDTMAA

Sequences:

>Translated_391_residues
MDSTALLLMGGGSRAAYQAGVLRGIARLARECAPDAVGSPFDVICGTSAGAINGVGLARGAQDFLQATEALVQLWAKLHA
DRVYRTDVGRVGASGARWLTALAFGWMTGRTPRALFDNTPLRELLLEQHDAQQLQAAFDAGALRALAVTALSYTTGRHVT
FYQSPHVVLPWRRSQRIAVTDTIGVPHLLASSSIPFLFPAEPVQLEGNDEWFGDGTMRQMSPLSPAIHLGASRILVVGAA
SRQQPGWYDTVPASGYPSLAQVAGQALASVFLDGLSADIERLQHVNAMVSRNPEIADARDGWRKIEVLVMSPSERIELIA
ARHVQRLPGTVRALLRPLGGTEARGAAFASYLLFEPEFTRELIDLGERDALARRDELAAFLYGVVPDTMAA
>Mature_391_residues
MDSTALLLMGGGSRAAYQAGVLRGIARLARECAPDAVGSPFDVICGTSAGAINGVGLARGAQDFLQATEALVQLWAKLHA
DRVYRTDVGRVGASGARWLTALAFGWMTGRTPRALFDNTPLRELLLEQHDAQQLQAAFDAGALRALAVTALSYTTGRHVT
FYQSPHVVLPWRRSQRIAVTDTIGVPHLLASSSIPFLFPAEPVQLEGNDEWFGDGTMRQMSPLSPAIHLGASRILVVGAA
SRQQPGWYDTVPASGYPSLAQVAGQALASVFLDGLSADIERLQHVNAMVSRNPEIADARDGWRKIEVLVMSPSERIELIA
ARHVQRLPGTVRALLRPLGGTEARGAAFASYLLFEPEFTRELIDLGERDALARRDELAAFLYGVVPDTMAA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42088; Mature: 42088

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTALLLMGGGSRAAYQAGVLRGIARLARECAPDAVGSPFDVICGTSAGAINGVGLARG
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHH
AQDFLQATEALVQLWAKLHADRVYRTDVGRVGASGARWLTALAFGWMTGRTPRALFDNTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCC
LRELLLEQHDAQQLQAAFDAGALRALAVTALSYTTGRHVTFYQSPHVVLPWRRSQRIAVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCEEEEE
DTIGVPHLLASSSIPFLFPAEPVQLEGNDEWFGDGTMRQMSPLSPAIHLGASRILVVGAA
ECCCCCHHHHCCCCCEEECCCCEEECCCCCCCCCCCHHHHCCCCHHHHCCCCEEEEEECC
SRQQPGWYDTVPASGYPSLAQVAGQALASVFLDGLSADIERLQHVNAMVSRNPEIADARD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GWRKIEVLVMSPSERIELIAARHVQRLPGTVRALLRPLGGTEARGAAFASYLLFEPEFTR
CCEEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHH
ELIDLGERDALARRDELAAFLYGVVPDTMAA
HHHCCCCHHHHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MDSTALLLMGGGSRAAYQAGVLRGIARLARECAPDAVGSPFDVICGTSAGAINGVGLARG
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHHH
AQDFLQATEALVQLWAKLHADRVYRTDVGRVGASGARWLTALAFGWMTGRTPRALFDNTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCC
LRELLLEQHDAQQLQAAFDAGALRALAVTALSYTTGRHVTFYQSPHVVLPWRRSQRIAVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCEEEEE
DTIGVPHLLASSSIPFLFPAEPVQLEGNDEWFGDGTMRQMSPLSPAIHLGASRILVVGAA
ECCCCCHHHHCCCCCEEECCCCEEECCCCCCCCCCCHHHHCCCCHHHHCCCCEEEEEECC
SRQQPGWYDTVPASGYPSLAQVAGQALASVFLDGLSADIERLQHVNAMVSRNPEIADARD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GWRKIEVLVMSPSERIELIAARHVQRLPGTVRALLRPLGGTEARGAAFASYLLFEPEFTR
CCEEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHH
ELIDLGERDALARRDELAAFLYGVVPDTMAA
HHHCCCCHHHHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA