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The map label for this gene is 17544964

Identifier: 17544964

GI number: 17544964

Start: 269437

End: 270915

Strand: Reverse

Name: 17544964

Synonym: RSc0245

Alternate gene names: NA

Gene position: 270915-269437 (Counterclockwise)

Preceding gene: 17544965

Following gene: 17544962

Centisome position: 7.29

GC content: 69.24

Gene sequence:

>1479_bases
ATGGCGATGAAGGCCGTCACCCGATCACCAGCCTATCCGTCCGGCCTACGCGACCTTGCGGCCACTGCCAAGACGGATGC
CACAACGTACCCGCTGCGACCACACAACAGCATGCCGCCAGGCACAGCCGGCGAGCAAAAGCCGCCCGGCAAGTCATCCG
CCGGCGGACCCCTGGCGGGACTGAGCAAGACCGGCCTCGGCGTCGTGCTCCCGGAACGCGCACTCCACCTGCCGGCCATG
GAAAGCCTGGCCGCCCCTGCCCGCCTCCTACCCCGCACCCGCCCGGCATCGGCCGACGCCGTCAGGCGGGCGCTGCTGAC
CGCGTTCTGGGGGAGCCACGGTGCACCGGAGGACTATGCCGAGCAGCAGCTCCTGAACCAGTTGAGGTCGCACAAGCCCG
CGGTACCGATGCCGTGCATCCTGTTCACGGACCCCAACAAGGACCCGGACGATGTCGTGGCCTTCACGCTCGCCAAGCCG
CTGCAGGCGTTCCGCCTGGTGAAGATGGCCCATGCGGTGGCGACGCTGGGCGAGCGCGACGTGCGGACCCGGCGCGCCGG
TGTGGCCAGGGGCGCGTTCGACCGGCTCGATCTGCAGGAGGTGCGGGTCACCGTCGGCCTCGACTACGCCATCAAGCCGG
AGCACGCGAAGGACCACGCCAAGTTCCTCGACCAGGGCGAGGCACTGCACGTCAAGCTCAAGCCGGAAGCCGCCAGCGAA
GACAGCGTCGCCGCGCTGCGGGAGAGCCTCACGCAGGCGGCGGCACCGGTCACGCTGGTTGTGATCGCGGGCATGACCGA
CCCCTGCGCGCTGGTCACGGCCGAGCCCGGCCTGGTCAAGCAGAAGGTCGGCCGCGTCGTCATCATGGGGGGCGTCCGGC
CGGACAAGGACGAGGACGGCTATGTGCAGCCCGACGACCGCGCGTACAACAACACGACCGATTTCGCCGCGGCGTGCCGC
TTCTACCGCCGCGTGCAGGAACTGGGCATCCCCCTGCGCATCGTCACCCGCGAAGCCGCATATCGGGCCGCGGTGCCGCG
CACCTTCTATGAGGACATGGCGCAGTCAGGCCATGTGGTCGGGCAGTACCTGAAAGACGTCCAGAAGCATGCGCTCAACA
CGCTATGGGACGGCATCGATCAGGGCCGGATCGCGAAACTGGACAAGCACTGGTTCTTCAATACGTTCATCGCCCGGGAA
ATCGGACAGGGCGACGCGGCGGCGTGGGCGGCCCGCAACCACACGTTCGACGCGATCTGGGAGCAGGTCGTCCGGCTGAA
CCTGTACGACCCGATGACGCTGCTGGCCGCGGTGCCCGCGTCCGCGCAGATGCTGTTCCGGCCGAAGGCCGTGCAGGACG
CGGGCCGCGGCCTCGTGGAGGTGATCGGCGCGGACGAGGTGCACTGCCCGTCCGACGCCCGGCAGCTGATGTCCGGCCTG
GTCAAGATGGCGCTGGCGAACACGCCGGGTACGCGCTGA

Upstream 100 bases:

>100_bases
GCGCTGTGCAATCTGATTGATCGCGACCACCCGCCACCTTCGCTCGGCACAACAAGACTTCGCCCCCCTCCCACATGCCC
GACCGGCAACTCGTCAGACT

Downstream 100 bases:

>100_bases
CCCGGCGCCGATCCGCCGGCGCGCCTCACTTGCGGTAGTCGTACACCCCGCGTCCGCTCTTGCGCCCCAGGTAGCCGGCG
GCGACCATCTCGCGCAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Effector Ripb Protein; Inosine/Uridine-Preferring Nucleoside Hydrolase

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MAMKAVTRSPAYPSGLRDLAATAKTDATTYPLRPHNSMPPGTAGEQKPPGKSSAGGPLAGLSKTGLGVVLPERALHLPAM
ESLAAPARLLPRTRPASADAVRRALLTAFWGSHGAPEDYAEQQLLNQLRSHKPAVPMPCILFTDPNKDPDDVVAFTLAKP
LQAFRLVKMAHAVATLGERDVRTRRAGVARGAFDRLDLQEVRVTVGLDYAIKPEHAKDHAKFLDQGEALHVKLKPEAASE
DSVAALRESLTQAAAPVTLVVIAGMTDPCALVTAEPGLVKQKVGRVVIMGGVRPDKDEDGYVQPDDRAYNNTTDFAAACR
FYRRVQELGIPLRIVTREAAYRAAVPRTFYEDMAQSGHVVGQYLKDVQKHALNTLWDGIDQGRIAKLDKHWFFNTFIARE
IGQGDAAAWAARNHTFDAIWEQVVRLNLYDPMTLLAAVPASAQMLFRPKAVQDAGRGLVEVIGADEVHCPSDARQLMSGL
VKMALANTPGTR

Sequences:

>Translated_492_residues
MAMKAVTRSPAYPSGLRDLAATAKTDATTYPLRPHNSMPPGTAGEQKPPGKSSAGGPLAGLSKTGLGVVLPERALHLPAM
ESLAAPARLLPRTRPASADAVRRALLTAFWGSHGAPEDYAEQQLLNQLRSHKPAVPMPCILFTDPNKDPDDVVAFTLAKP
LQAFRLVKMAHAVATLGERDVRTRRAGVARGAFDRLDLQEVRVTVGLDYAIKPEHAKDHAKFLDQGEALHVKLKPEAASE
DSVAALRESLTQAAAPVTLVVIAGMTDPCALVTAEPGLVKQKVGRVVIMGGVRPDKDEDGYVQPDDRAYNNTTDFAAACR
FYRRVQELGIPLRIVTREAAYRAAVPRTFYEDMAQSGHVVGQYLKDVQKHALNTLWDGIDQGRIAKLDKHWFFNTFIARE
IGQGDAAAWAARNHTFDAIWEQVVRLNLYDPMTLLAAVPASAQMLFRPKAVQDAGRGLVEVIGADEVHCPSDARQLMSGL
VKMALANTPGTR
>Mature_491_residues
AMKAVTRSPAYPSGLRDLAATAKTDATTYPLRPHNSMPPGTAGEQKPPGKSSAGGPLAGLSKTGLGVVLPERALHLPAME
SLAAPARLLPRTRPASADAVRRALLTAFWGSHGAPEDYAEQQLLNQLRSHKPAVPMPCILFTDPNKDPDDVVAFTLAKPL
QAFRLVKMAHAVATLGERDVRTRRAGVARGAFDRLDLQEVRVTVGLDYAIKPEHAKDHAKFLDQGEALHVKLKPEAASED
SVAALRESLTQAAAPVTLVVIAGMTDPCALVTAEPGLVKQKVGRVVIMGGVRPDKDEDGYVQPDDRAYNNTTDFAAACRF
YRRVQELGIPLRIVTREAAYRAAVPRTFYEDMAQSGHVVGQYLKDVQKHALNTLWDGIDQGRIAKLDKHWFFNTFIAREI
GQGDAAAWAARNHTFDAIWEQVVRLNLYDPMTLLAAVPASAQMLFRPKAVQDAGRGLVEVIGADEVHCPSDARQLMSGLV
KMALANTPGTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53311; Mature: 53179

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMKAVTRSPAYPSGLRDLAATAKTDATTYPLRPHNSMPPGTAGEQKPPGKSSAGGPLAG
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LSKTGLGVVLPERALHLPAMESLAAPARLLPRTRPASADAVRRALLTAFWGSHGAPEDYA
CCCCCCEEECCHHHHCCCHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
EQQLLNQLRSHKPAVPMPCILFTDPNKDPDDVVAFTLAKPLQAFRLVKMAHAVATLGERD
HHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VRTRRAGVARGAFDRLDLQEVRVTVGLDYAIKPEHAKDHAKFLDQGEALHVKLKPEAASE
HHHHHHHHHHCCHHHCCHHHEEEEEECCEEECCCCHHHHHHHHCCCCEEEEEECCCCCCC
DSVAALRESLTQAAAPVTLVVIAGMTDPCALVTAEPGLVKQKVGRVVIMGGVRPDKDEDG
HHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCC
YVQPDDRAYNNTTDFAAACRFYRRVQELGIPLRIVTREAAYRAAVPRTFYEDMAQSGHVV
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCHHHHHHHHHCCHHH
GQYLKDVQKHALNTLWDGIDQGRIAKLDKHWFFNTFIAREIGQGDAAAWAARNHTFDAIW
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHH
EQVVRLNLYDPMTLLAAVPASAQMLFRPKAVQDAGRGLVEVIGADEVHCPSDARQLMSGL
HHHHHHCCCCHHHHHHHCCCCHHHHCCCHHHHHHCCCCEEHHCCCCCCCCHHHHHHHHHH
VKMALANTPGTR
HHHHHCCCCCCC
>Mature Secondary Structure 
AMKAVTRSPAYPSGLRDLAATAKTDATTYPLRPHNSMPPGTAGEQKPPGKSSAGGPLAG
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LSKTGLGVVLPERALHLPAMESLAAPARLLPRTRPASADAVRRALLTAFWGSHGAPEDYA
CCCCCCEEECCHHHHCCCHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
EQQLLNQLRSHKPAVPMPCILFTDPNKDPDDVVAFTLAKPLQAFRLVKMAHAVATLGERD
HHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VRTRRAGVARGAFDRLDLQEVRVTVGLDYAIKPEHAKDHAKFLDQGEALHVKLKPEAASE
HHHHHHHHHHCCHHHCCHHHEEEEEECCEEECCCCHHHHHHHHCCCCEEEEEECCCCCCC
DSVAALRESLTQAAAPVTLVVIAGMTDPCALVTAEPGLVKQKVGRVVIMGGVRPDKDEDG
HHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCC
YVQPDDRAYNNTTDFAAACRFYRRVQELGIPLRIVTREAAYRAAVPRTFYEDMAQSGHVV
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCHHHHHHHHHCCHHH
GQYLKDVQKHALNTLWDGIDQGRIAKLDKHWFFNTFIAREIGQGDAAAWAARNHTFDAIW
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHH
EQVVRLNLYDPMTLLAAVPASAQMLFRPKAVQDAGRGLVEVIGADEVHCPSDARQLMSGL
HHHHHHCCCCHHHHHHHCCCCHHHHCCCHHHHHHCCCCEEHHCCCCCCCCHHHHHHHHHH
VKMALANTPGTR
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA