Click here to switch to the map view.

The map label for this gene is 17544912

Identifier: 17544912

GI number: 17544912

Start: 214383

End: 214877

Strand: Reverse

Name: 17544912

Synonym: RSc0193

Alternate gene names: NA

Gene position: 214877-214383 (Counterclockwise)

Preceding gene: 17544917

Following gene: 17544909

Centisome position: 5.78

GC content: 56.57

Gene sequence:

>495_bases
ATGCAACAACCTTCAGATGTGGCCTGCAATCTGACATGCGCTGCCATGCGCGGCATTGGCCGCAGCGCCGAATTCTTGAT
CGAAGCGCAAATCGAGTTCTCCCGCTTGCGTCTCAAGATCGCGGAAGCCGCGTTGGAGGATGTGCGGGAAATGGAGCACG
CGTTTGGCGATACCAATGACTTGGCATCCTTGGTTTTATCTCCAAACATGCTCATGAAGATGCAATCGACCCATAGCGTC
ACCGCACTGAAATCGTGGATTGACTTCGTGAACAACCTGCAAGCGGCGTATCTCCGCCAGTTGACGGAGTGGAATGGCCA
GATGCAACTCCCGCAAGGACAGATTGCTTCCTCGCCATTGTTCGCTGCATCCGCCGATTCGTTGCGGGCCTTCTTCAGCA
GCTTCAACGTCGTTGCCGGCTGCGACTCCGAAACCTGGGGAACGAACCCGTCACAACCTGCGGAAAAGGCAACGCCGCGT
ATGCGTGCCGCCTGA

Upstream 100 bases:

>100_bases
GCGCGATATCAATCCAGAGACCACCAGAGTGTCTAACCTATTTTGAATCACTCATCCGGCAGACATTTCCTCCTGCCGCC
AAGCCCGAACGGAGACAGCA

Downstream 100 bases:

>100_bases
TAGAGCCTCACGCCTGTAGAGGCGGCCTAGTAGCGCAATGGATAGCACAGATCGCAACGTGTAGTCGCCTCAACATGGCA
GGCCGAGTCTTGGGGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MQQPSDVACNLTCAAMRGIGRSAEFLIEAQIEFSRLRLKIAEAALEDVREMEHAFGDTNDLASLVLSPNMLMKMQSTHSV
TALKSWIDFVNNLQAAYLRQLTEWNGQMQLPQGQIASSPLFAASADSLRAFFSSFNVVAGCDSETWGTNPSQPAEKATPR
MRAA

Sequences:

>Translated_164_residues
MQQPSDVACNLTCAAMRGIGRSAEFLIEAQIEFSRLRLKIAEAALEDVREMEHAFGDTNDLASLVLSPNMLMKMQSTHSV
TALKSWIDFVNNLQAAYLRQLTEWNGQMQLPQGQIASSPLFAASADSLRAFFSSFNVVAGCDSETWGTNPSQPAEKATPR
MRAA
>Mature_164_residues
MQQPSDVACNLTCAAMRGIGRSAEFLIEAQIEFSRLRLKIAEAALEDVREMEHAFGDTNDLASLVLSPNMLMKMQSTHSV
TALKSWIDFVNNLQAAYLRQLTEWNGQMQLPQGQIASSPLFAASADSLRAFFSSFNVVAGCDSETWGTNPSQPAEKATPR
MRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17988; Mature: 17988

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPSDVACNLTCAAMRGIGRSAEFLIEAQIEFSRLRLKIAEAALEDVREMEHAFGDTND
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LASLVLSPNMLMKMQSTHSVTALKSWIDFVNNLQAAYLRQLTEWNGQMQLPQGQIASSPL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC
FAASADSLRAFFSSFNVVAGCDSETWGTNPSQPAEKATPRMRAA
CCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MQQPSDVACNLTCAAMRGIGRSAEFLIEAQIEFSRLRLKIAEAALEDVREMEHAFGDTND
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LASLVLSPNMLMKMQSTHSVTALKSWIDFVNNLQAAYLRQLTEWNGQMQLPQGQIASSPL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC
FAASADSLRAFFSSFNVVAGCDSETWGTNPSQPAEKATPRMRAA
CCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA