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The map label for this gene is ybhS [H]

Identifier: 17544884

GI number: 17544884

Start: 185261

End: 186406

Strand: Direct

Name: ybhS [H]

Synonym: RSc0165

Alternate gene names: 17544884

Gene position: 185261-186406 (Clockwise)

Preceding gene: 17544883

Following gene: 17544885

Centisome position: 4.98

GC content: 66.06

Gene sequence:

>1146_bases
ATGAACGTCAACGGCACGCGGTTCTCCCTGCACCGCTGGTGGAGCATCGTCCTGAAGGAGTTCCTGCAGCTGCGGCGCGA
CCGCGTGACCTTCGCGATGATGATCGGCATCCCGATCATGCAGCTGCTGATGTTCGGTTTCGCCATCAACACCGACCCGA
AGCATCTGCCGACCGGCGTGATCGCGGCCGACCGGAGCGAGTTCACGCGCAGCTTCCTCGCCAGCCTGCGCAATACCGAC
TATTTCCGCCTCGACGAGACGCTGCCCGACGAGGCCGCCGGCCGCCAGGCGCTGGCCGAGGGGCGGCTGCAGTTCGTCGT
CAGCATTCCGCCCGACTTCACCCGCCGGCTGGTGCGCGGCGAGCGCCCCGCGCTGCTGGTCGAGGCCGACGCGACCGACC
CTTCGGCGACGGGCCTGGCGCTGGCCTCTGTCACGCAACTCGCGCAGGGCGTGGTCAGCAAGGACATGAAGGGCGTGCTC
GCGCCGCTGGCGGGCGGCCAGCCGCCGTTCGAGGTGCGCGTGCACCGGCTCTACAACCCGGAAGGCATCACGCAGTACAA
CATCATCCCCGGTCTGATGGGCGTGATCCTGACCATGACCATGGTGATGATGACCGGCCTGGCCATGACGCGCGAACGCG
AGCGCGGCACCATGGAAAACCTGCTTGCCACGCCGGTGCGCCCGCTGGAAGTGATGACGGGCAAGATCGTGCCCTACATC
TTCATCGGGCTGGTGCAGGTGAGCATCATCCTGCTGGCGGCCCGCTTTATCTTCCACGTGCCGTTTGTCGGCAGCGCGTG
GATGGTCTACCTGGCCGCGCTGCTGTTCATCGTCGCCAGCCTGACGGTGGGCATCACGCTGTCGTCGCTGGCGCAGAACC
AGTTGCAGGCGACGCAGCTGACGTTCTTCTACTTCCTGCCCAGCATCCTGCTGTCGGGCTTCATGTTCCCGTTCGCGGGC
ATGCCGAAGTGGGCGCAGGTGATCGGCGACGTGCTGCCGATGACGTATTTCCACCGGCTCACGCGCGGCATCCTGCTCAA
GGGCAACGGCTGGGTCGAACTGTGGCCGAGCATCTGGCCGCTGCTGGTCTTCACGGCGGTGGTGATGGGCATCGCGCTGC
GCTTTTATCGCAAGACGCTGGATTGA

Upstream 100 bases:

>100_bases
CCGGCCAAGCGCACCTGCGCGTCGAGCCCATCGAGACCGGCCTGGAAGATGTCTTCATCCACATGATGCGGGGCTCGTCC
GACAACTACGGAGCGCAGTC

Downstream 100 bases:

>100_bases
GGTGGCCATGTGTACATCGACATCGCTGATCCTGTCCGCCGCGGCCGCCGTCGCACTGGGCGGCTGTGCCGTCGGCCCGG
ACTTCAAGGCGCCGGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNVNGTRFSLHRWWSIVLKEFLQLRRDRVTFAMMIGIPIMQLLMFGFAINTDPKHLPTGVIAADRSEFTRSFLASLRNTD
YFRLDETLPDEAAGRQALAEGRLQFVVSIPPDFTRRLVRGERPALLVEADATDPSATGLALASVTQLAQGVVSKDMKGVL
APLAGGQPPFEVRVHRLYNPEGITQYNIIPGLMGVILTMTMVMMTGLAMTRERERGTMENLLATPVRPLEVMTGKIVPYI
FIGLVQVSIILLAARFIFHVPFVGSAWMVYLAALLFIVASLTVGITLSSLAQNQLQATQLTFFYFLPSILLSGFMFPFAG
MPKWAQVIGDVLPMTYFHRLTRGILLKGNGWVELWPSIWPLLVFTAVVMGIALRFYRKTLD

Sequences:

>Translated_381_residues
MNVNGTRFSLHRWWSIVLKEFLQLRRDRVTFAMMIGIPIMQLLMFGFAINTDPKHLPTGVIAADRSEFTRSFLASLRNTD
YFRLDETLPDEAAGRQALAEGRLQFVVSIPPDFTRRLVRGERPALLVEADATDPSATGLALASVTQLAQGVVSKDMKGVL
APLAGGQPPFEVRVHRLYNPEGITQYNIIPGLMGVILTMTMVMMTGLAMTRERERGTMENLLATPVRPLEVMTGKIVPYI
FIGLVQVSIILLAARFIFHVPFVGSAWMVYLAALLFIVASLTVGITLSSLAQNQLQATQLTFFYFLPSILLSGFMFPFAG
MPKWAQVIGDVLPMTYFHRLTRGILLKGNGWVELWPSIWPLLVFTAVVMGIALRFYRKTLD
>Mature_381_residues
MNVNGTRFSLHRWWSIVLKEFLQLRRDRVTFAMMIGIPIMQLLMFGFAINTDPKHLPTGVIAADRSEFTRSFLASLRNTD
YFRLDETLPDEAAGRQALAEGRLQFVVSIPPDFTRRLVRGERPALLVEADATDPSATGLALASVTQLAQGVVSKDMKGVL
APLAGGQPPFEVRVHRLYNPEGITQYNIIPGLMGVILTMTMVMMTGLAMTRERERGTMENLLATPVRPLEVMTGKIVPYI
FIGLVQVSIILLAARFIFHVPFVGSAWMVYLAALLFIVASLTVGITLSSLAQNQLQATQLTFFYFLPSILLSGFMFPFAG
MPKWAQVIGDVLPMTYFHRLTRGILLKGNGWVELWPSIWPLLVFTAVVMGIALRFYRKTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=351, Percent_Identity=31.0541310541311, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1787010, Length=368, Percent_Identity=26.9021739130435, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI48994943, Length=374, Percent_Identity=29.144385026738, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI226510979, Length=388, Percent_Identity=27.0618556701031, Blast_Score=117, Evalue=1e-27,
Organism=Drosophila melanogaster, GI85725260, Length=371, Percent_Identity=22.3719676549865, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI85725262, Length=408, Percent_Identity=22.7941176470588, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24650855, Length=375, Percent_Identity=22.1333333333333, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24650853, Length=364, Percent_Identity=22.2527472527473, Blast_Score=86, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42556; Mature: 42556

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNGTRFSLHRWWSIVLKEFLQLRRDRVTFAMMIGIPIMQLLMFGFAINTDPKHLPTGV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
IAADRSEFTRSFLASLRNTDYFRLDETLPDEAAGRQALAEGRLQFVVSIPPDFTRRLVRG
HCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHCC
ERPALLVEADATDPSATGLALASVTQLAQGVVSKDMKGVLAPLAGGQPPFEVRVHRLYNP
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECC
EGITQYNIIPGLMGVILTMTMVMMTGLAMTRERERGTMENLLATPVRPLEVMTGKIVPYI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHH
FIGLVQVSIILLAARFIFHVPFVGSAWMVYLAALLFIVASLTVGITLSSLAQNQLQATQL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFFYFLPSILLSGFMFPFAGMPKWAQVIGDVLPMTYFHRLTRGILLKGNGWVELWPSIWP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEHHHHHH
LLVFTAVVMGIALRFYRKTLD
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVNGTRFSLHRWWSIVLKEFLQLRRDRVTFAMMIGIPIMQLLMFGFAINTDPKHLPTGV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
IAADRSEFTRSFLASLRNTDYFRLDETLPDEAAGRQALAEGRLQFVVSIPPDFTRRLVRG
HCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHCC
ERPALLVEADATDPSATGLALASVTQLAQGVVSKDMKGVLAPLAGGQPPFEVRVHRLYNP
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECC
EGITQYNIIPGLMGVILTMTMVMMTGLAMTRERERGTMENLLATPVRPLEVMTGKIVPYI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHH
FIGLVQVSIILLAARFIFHVPFVGSAWMVYLAALLFIVASLTVGITLSSLAQNQLQATQL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFFYFLPSILLSGFMFPFAGMPKWAQVIGDVLPMTYFHRLTRGILLKGNGWVELWPSIWP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEHHHHHH
LLVFTAVVMGIALRFYRKTLD
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]