Click here to switch to the map view.

The map label for this gene is 17544876

Identifier: 17544876

GI number: 17544876

Start: 177277

End: 177669

Strand: Direct

Name: 17544876

Synonym: RSc0157

Alternate gene names: NA

Gene position: 177277-177669 (Clockwise)

Preceding gene: 17544875

Following gene: 17544879

Centisome position: 4.77

GC content: 64.89

Gene sequence:

>393_bases
ATGCCTTTCCTGCTTTCCCATCCGCGCCTGGCGCACTGCCGCCGCCTGTTCCTGCGCAACTACGAGGTGCAGATCAACAT
CGGCGTGCACGAATTCGAGAAGAAGGGCGAGCAGCGCGTCCTCGTCAATATCGATCTGTACGTGCCGCTGGCGTACTCCA
CGCCCCAGCACGACAAGCTGCACGAGGTGGTCGACTACGACCTCATGCGCGAGACCGTGGCGCGCCGCATGGCGCAAGGC
CACGTGCACCTGCAGGAAACCCTGTGCGACGACGTGCTGGCGGGCCTGCTCGCGCATCCGCATGTGCTGGCCGCGCGGGT
CTCGGCGGAGAAGCCGGACGCTTATCCGGATTGCGAGTCGGTGGGCGTGGAAGTGTTCCGCATCAAGGACTGA

Upstream 100 bases:

>100_bases
GCCGTCACCGGCACCACGCTGTTCGTCGACGGCGGCCAGCACCTGATGCCGCTGGCCCGCGACGTGATGTTCCTGACCGA
ATAAGACCCCTCATCGCCTT

Downstream 100 bases:

>100_bases
GCGCCGGCCGACTCAGGCCGCACTCGCATATTCGCGGCGCTGGGCGTGCAACGCGCCCGCGACGGCGCCCAGCAGGTCCA
GCGCCAGCCGTGCCGTGATC

Product: hypothetical protein

Products: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine; glycolaldehyde

Alternate protein names: Dihydroneopterin Aldolase Family Protein; Dihydroneopterin Aldolase Protein

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MPFLLSHPRLAHCRRLFLRNYEVQINIGVHEFEKKGEQRVLVNIDLYVPLAYSTPQHDKLHEVVDYDLMRETVARRMAQG
HVHLQETLCDDVLAGLLAHPHVLAARVSAEKPDAYPDCESVGVEVFRIKD

Sequences:

>Translated_130_residues
MPFLLSHPRLAHCRRLFLRNYEVQINIGVHEFEKKGEQRVLVNIDLYVPLAYSTPQHDKLHEVVDYDLMRETVARRMAQG
HVHLQETLCDDVLAGLLAHPHVLAARVSAEKPDAYPDCESVGVEVFRIKD
>Mature_129_residues
PFLLSHPRLAHCRRLFLRNYEVQINIGVHEFEKKGEQRVLVNIDLYVPLAYSTPQHDKLHEVVDYDLMRETVARRMAQGH
VHLQETLCDDVLAGLLAHPHVLAARVSAEKPDAYPDCESVGVEVFRIKD

Specific function: Unknown

COG id: COG1539

COG function: function code H; Dihydroneopterin aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.2.25

Molecular weight: Translated: 14950; Mature: 14819

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLLSHPRLAHCRRLFLRNYEVQINIGVHEFEKKGEQRVLVNIDLYVPLAYSTPQHDKL
CCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHCCCCCEEEEEEEEEEEEECCCCCCHHH
HEVVDYDLMRETVARRMAQGHVHLQETLCDDVLAGLLAHPHVLAARVSAEKPDAYPDCES
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHH
VGVEVFRIKD
CCEEEEEECC
>Mature Secondary Structure 
PFLLSHPRLAHCRRLFLRNYEVQINIGVHEFEKKGEQRVLVNIDLYVPLAYSTPQHDKL
CCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHCCCCCEEEEEEEEEEEEECCCCCCHHH
HEVVDYDLMRETVARRMAQGHVHLQETLCDDVLAGLLAHPHVLAARVSAEKPDAYPDCES
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHH
VGVEVFRIKD
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-; $dihydropteridine

Specific reaction: 2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8- $dihydropteridine = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + glycolaldehyde

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA