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The map label for this gene is 17544864

Identifier: 17544864

GI number: 17544864

Start: 166728

End: 167636

Strand: Reverse

Name: 17544864

Synonym: RSc0145

Alternate gene names: NA

Gene position: 167636-166728 (Counterclockwise)

Preceding gene: 17544865

Following gene: 17544863

Centisome position: 4.51

GC content: 65.68

Gene sequence:

>909_bases
ATGCCTCAAGTCACGGCAAGCAAGCTGCCGCTCAAGCTGCTCGCGCTCGTCTTCGGCGCCGTGCTGGCGCTCGCGGTCGC
GCGCACCTTCCTGCTGACCTGGCAGATCATTCCGCCGGGCTACACCGGCATCAAGATCAACCGGCTCGTGGACCGCGGCA
TCACGCGCGAGAACGTGGTCACCGGCTTCGTGTTCTACAACCCGGTGCAGACCGCGCTCATCCAGTACCCGACCTTCGTC
CAGCGGGTCATCTGGACGCAGGACGTCAACGAAGGCCACGCGCTCAACGAGGAGCTGACCTTCAACACGAAAGACGCCGT
GCCGGTCAATGTCGACGTGGCGGTGTCGTACCAGCTCGATCGCGACAAGGTGCCCGACTTCTACACGAACTTCCGCGCCG
ACCGCATCGACAGCTTCACGCACGGCTACCTGCGCGACACGGCGCGCAACATCATCGTCGCCATCGGCTCGGAATACAGC
TTCGACGACGTGAACGGCGCCAGGAAGGAGGAGTTCGTCTCGCGCCTGACCAGGGAACTGGATGCGCGGCTGATGCCGCT
GGGCGTGTCGATCAAGCAGTTCGGCATCGTCGGTTCGCTGCGGCCGCCGCGCGCGCTGCTCGATGCGGTCAGCGCCAAGA
CCAAGGCCATCCAGGATGCGATCCGCACGGAGAACGAAGTCCGCTCCGCGCAGGCCGAGGCCAAGAAGAAGGTGGCGATC
GCCGAAGGCGAAGCGGCCGCGAACCACGCGCTGGCGTCCTCGCTGGATGACCGCCTGCTGGCCTGGGAGCGCCTGAAGCT
GGAGCGCGCCGCCATCGAGAAATGGAATGGCGTGACGCCGAGCGTCATGGGCGGCACGAGCGGAGGTGGCATGCTGTTCA
ACATCCCCATGGGACCGCAGAGCCGATGA

Upstream 100 bases:

>100_bases
CATCCCTGACGGGAATCGCTGACCCTTCCTGCGCCAGCCACCGGGCATGCCGCCCGGCCCGCCAGCTACACCACCCATAC
AACAAGCAAGGGGAATCCAC

Downstream 100 bases:

>100_bases
GCCCGCCGGCCGACCTGCCGGTCGGCCACCATCCGCACGATCCGGCTACAGGAACGCGCCTTCGGGCGCGTTTTTTCCGC
CCGCGCGACGCGGCCCAGCA

Product: transmembrane protein

Products: NA

Alternate protein names: Bacteriophage/Transposase Fusion Protein; Stomatin/Prohibitin-Like Protein; Lipoprotein; SPFH Domain / Band 7 Family

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MPQVTASKLPLKLLALVFGAVLALAVARTFLLTWQIIPPGYTGIKINRLVDRGITRENVVTGFVFYNPVQTALIQYPTFV
QRVIWTQDVNEGHALNEELTFNTKDAVPVNVDVAVSYQLDRDKVPDFYTNFRADRIDSFTHGYLRDTARNIIVAIGSEYS
FDDVNGARKEEFVSRLTRELDARLMPLGVSIKQFGIVGSLRPPRALLDAVSAKTKAIQDAIRTENEVRSAQAEAKKKVAI
AEGEAAANHALASSLDDRLLAWERLKLERAAIEKWNGVTPSVMGGTSGGGMLFNIPMGPQSR

Sequences:

>Translated_302_residues
MPQVTASKLPLKLLALVFGAVLALAVARTFLLTWQIIPPGYTGIKINRLVDRGITRENVVTGFVFYNPVQTALIQYPTFV
QRVIWTQDVNEGHALNEELTFNTKDAVPVNVDVAVSYQLDRDKVPDFYTNFRADRIDSFTHGYLRDTARNIIVAIGSEYS
FDDVNGARKEEFVSRLTRELDARLMPLGVSIKQFGIVGSLRPPRALLDAVSAKTKAIQDAIRTENEVRSAQAEAKKKVAI
AEGEAAANHALASSLDDRLLAWERLKLERAAIEKWNGVTPSVMGGTSGGGMLFNIPMGPQSR
>Mature_301_residues
PQVTASKLPLKLLALVFGAVLALAVARTFLLTWQIIPPGYTGIKINRLVDRGITRENVVTGFVFYNPVQTALIQYPTFVQ
RVIWTQDVNEGHALNEELTFNTKDAVPVNVDVAVSYQLDRDKVPDFYTNFRADRIDSFTHGYLRDTARNIIVAIGSEYSF
DDVNGARKEEFVSRLTRELDARLMPLGVSIKQFGIVGSLRPPRALLDAVSAKTKAIQDAIRTENEVRSAQAEAKKKVAIA
EGEAAANHALASSLDDRLLAWERLKLERAAIEKWNGVTPSVMGGTSGGGMLFNIPMGPQSR

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33314; Mature: 33182

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQVTASKLPLKLLALVFGAVLALAVARTFLLTWQIIPPGYTGIKINRLVDRGITRENVV
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEHHHHHCCCCHHHHE
TGFVFYNPVQTALIQYPTFVQRVIWTQDVNEGHALNEELTFNTKDAVPVNVDVAVSYQLD
EEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEEEC
RDKVPDFYTNFRADRIDSFTHGYLRDTARNIIVAIGSEYSFDDVNGARKEEFVSRLTREL
CCCCCHHHHHCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
DARLMPLGVSIKQFGIVGSLRPPRALLDAVSAKTKAIQDAIRTENEVRSAQAEAKKKVAI
HCEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
AEGEAAANHALASSLDDRLLAWERLKLERAAIEKWNGVTPSVMGGTSGGGMLFNIPMGPQ
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEECCCCCC
SR
CC
>Mature Secondary Structure 
PQVTASKLPLKLLALVFGAVLALAVARTFLLTWQIIPPGYTGIKINRLVDRGITRENVV
CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEHHHHHCCCCHHHHE
TGFVFYNPVQTALIQYPTFVQRVIWTQDVNEGHALNEELTFNTKDAVPVNVDVAVSYQLD
EEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEEEC
RDKVPDFYTNFRADRIDSFTHGYLRDTARNIIVAIGSEYSFDDVNGARKEEFVSRLTREL
CCCCCHHHHHCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
DARLMPLGVSIKQFGIVGSLRPPRALLDAVSAKTKAIQDAIRTENEVRSAQAEAKKKVAI
HCEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
AEGEAAANHALASSLDDRLLAWERLKLERAAIEKWNGVTPSVMGGTSGGGMLFNIPMGPQ
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEECCCCCC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA