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The map label for this gene is 17544857

Identifier: 17544857

GI number: 17544857

Start: 160572

End: 161399

Strand: Direct

Name: 17544857

Synonym: RSc0138

Alternate gene names: NA

Gene position: 160572-161399 (Clockwise)

Preceding gene: 17544856

Following gene: 17544859

Centisome position: 4.32

GC content: 64.86

Gene sequence:

>828_bases
ATGGGATCGAACGGCAAGACCCCGTTGGACGATTGGCGATTCGACGGCAGCGGCAGGTTCAAGATCGCCAAGGCTGACCC
CGCGGCCAAGCCCTGCACCACCGGCACCAAGGCCGGCGACATTGCGCGGCTGGCCGAACTGTCCGTCCGGCTGGATACCT
TGCAGGACATCCTCTACGCCGAGCACCACCGCAAGCTGCTGGTGGTCCTGCAGGGCATGGACACCTCCGGCAAGGACGGC
ACCGTGCGCGGCGTGTTCCGGGCCTTCGATCCGCTAGGCCTGCGCGTGGCCGGCTTCAAGGCCCCGACGCCGCAGGAACT
GGCGCGCGATTTTCTCTGGCGCGTGCATGCCCAGGTGCCGGCGCGCGGCGAGATCGTCATCTTCAACCGCAGCCACTACG
AAGACGTGCTGATCACGCGGGTGCACGGCGACATCGATGCTGCCGAATGCAAGCGCCGCTATGAGCACATCAGGGCCTTC
GAGCGGATGCTCGAGGAGACCGGCACGACCATCGTCAAATGCTTTCTGCACCTCTCCAGGGACGAGCAGCGCGCGCGCCT
GCAGGAGCGCATCGACGATCCGCACAAGCACTGGAAATTCGATCCCGCCGACATCGAAGAGCGCCGATACTGGGACGACT
ACATGGTGGCCTACGAAGACGCCATCAACGCCACCGCGACGCCCGAGGCGCCCTGGCATGTCGTGCCGGCGGATTCCAAG
TCGCACCGCAACCTGATGGTGGCGGAGATCATGCTGCACGTCCTGGAGCGGATGAAGCCGGAGTATCCGGAGGGGAATCC
GGCTTTTGAGGTGGTGAAGATCGAATGA

Upstream 100 bases:

>100_bases
AGGCACGCTGGACCTGGACGCACTGAAGCAGACCGCCGCGCACTGAGCGCGGCAGGCCGCGGCGCCGGCCGCTGCGTCAG
AACGACAACAAGGAGGCTCG

Downstream 100 bases:

>100_bases
TCTTCTTGGGGGGGCTTGGCGTTCGTCCCGGCCCTGGCGGGGGACGAAATCGGGGGAGCCGCCAAGCTCCACCCCCAAAG
CAAGCGCCAAAAGCACTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MGSNGKTPLDDWRFDGSGRFKIAKADPAAKPCTTGTKAGDIARLAELSVRLDTLQDILYAEHHRKLLVVLQGMDTSGKDG
TVRGVFRAFDPLGLRVAGFKAPTPQELARDFLWRVHAQVPARGEIVIFNRSHYEDVLITRVHGDIDAAECKRRYEHIRAF
ERMLEETGTTIVKCFLHLSRDEQRARLQERIDDPHKHWKFDPADIEERRYWDDYMVAYEDAINATATPEAPWHVVPADSK
SHRNLMVAEIMLHVLERMKPEYPEGNPAFEVVKIE

Sequences:

>Translated_275_residues
MGSNGKTPLDDWRFDGSGRFKIAKADPAAKPCTTGTKAGDIARLAELSVRLDTLQDILYAEHHRKLLVVLQGMDTSGKDG
TVRGVFRAFDPLGLRVAGFKAPTPQELARDFLWRVHAQVPARGEIVIFNRSHYEDVLITRVHGDIDAAECKRRYEHIRAF
ERMLEETGTTIVKCFLHLSRDEQRARLQERIDDPHKHWKFDPADIEERRYWDDYMVAYEDAINATATPEAPWHVVPADSK
SHRNLMVAEIMLHVLERMKPEYPEGNPAFEVVKIE
>Mature_274_residues
GSNGKTPLDDWRFDGSGRFKIAKADPAAKPCTTGTKAGDIARLAELSVRLDTLQDILYAEHHRKLLVVLQGMDTSGKDGT
VRGVFRAFDPLGLRVAGFKAPTPQELARDFLWRVHAQVPARGEIVIFNRSHYEDVLITRVHGDIDAAECKRRYEHIRAFE
RMLEETGTTIVKCFLHLSRDEQRARLQERIDDPHKHWKFDPADIEERRYWDDYMVAYEDAINATATPEAPWHVVPADSKS
HRNLMVAEIMLHVLERMKPEYPEGNPAFEVVKIE

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 31483; Mature: 31352

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNGKTPLDDWRFDGSGRFKIAKADPAAKPCTTGTKAGDIARLAELSVRLDTLQDILYA
CCCCCCCCCHHCEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EHHRKLLVVLQGMDTSGKDGTVRGVFRAFDPLGLRVAGFKAPTPQELARDFLWRVHAQVP
HHCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
ARGEIVIFNRSHYEDVLITRVHGDIDAAECKRRYEHIRAFERMLEETGTTIVKCFLHLSR
CCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
DEQRARLQERIDDPHKHWKFDPADIEERRYWDDYMVAYEDAINATATPEAPWHVVPADSK
CHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
SHRNLMVAEIMLHVLERMKPEYPEGNPAFEVVKIE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
GSNGKTPLDDWRFDGSGRFKIAKADPAAKPCTTGTKAGDIARLAELSVRLDTLQDILYA
CCCCCCCCHHCEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EHHRKLLVVLQGMDTSGKDGTVRGVFRAFDPLGLRVAGFKAPTPQELARDFLWRVHAQVP
HHCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
ARGEIVIFNRSHYEDVLITRVHGDIDAAECKRRYEHIRAFERMLEETGTTIVKCFLHLSR
CCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
DEQRARLQERIDDPHKHWKFDPADIEERRYWDDYMVAYEDAINATATPEAPWHVVPADSK
CHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
SHRNLMVAEIMLHVLERMKPEYPEGNPAFEVVKIE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]