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The map label for this gene is yjiA [H]

Identifier: 17544766

GI number: 17544766

Start: 51498

End: 52586

Strand: Reverse

Name: yjiA [H]

Synonym: RSc0047

Alternate gene names: 17544766

Gene position: 52586-51498 (Counterclockwise)

Preceding gene: 17544767

Following gene: 17544765

Centisome position: 1.41

GC content: 65.11

Gene sequence:

>1089_bases
ATGTCCAAACTGATCCCGGTCACCATCCTGACGGGCTTTCTCGGCAGCGGGAAGACCACACTGCTCAAGCGCATCCTGAC
CGAACAGCACGGCATGAAGATCGCCGTGATCGAGAACGAGTTCGGCGAGGAGAACATCGACAACGACATCCTCGTGCAGG
ACGGCAACGAGCAGATCGTGCAGATGAGCAACGGCTGCATCTGCTGCACCATCCGCGGCGACCTGGTGGCCGCGCTGTCC
GACCTGCTCACGCGCCGCGACAAGGGCGAGCTGCAGTTCGACCGCGTGGTCATCGAGACCACCGGCGTGGCCAACCCGGG
CCCGGTCGCGCAGACCTTCTTCATGGACGACGAGATCGCCGCCCGCTACCTGCTGGACGCCGTCATCACGCTGGTCGACG
CCAAGCACGGCAACCAGCAGCTCGACAGGCAGGAGGAAGCGCAGCGCCAGGTGGGCTTCGCCGACGCGATCTTCATCACC
AAGGGCGACCTGGTCTCCGACGACGACGTCGAGGCGCTGCGCCACCGCCTGCTGCACATGAACCCGCGCGCGCCGATCCG
CACCGCCAACTTCGGCGAGGCGCCGATCGACACCATCTTCGACCTGCGCGGCTTCAACCTGAACGCCAAGCTGGAGATCG
ACCCCGACTTCCTGCGCGAGGACGACCACGATCACGACCACGGTCATGAGCACAACCACGCCTGCTCGCCCGACTGCGAT
CACGATCACGAGCATGGCCACGATCACCATCACGGGCACGGCCATCACCACCATCACGGCCACGCGCACCATACCGACCG
CATCGCCTCGTTCGTCTTCCGCAGCGAACGGCCGTTCAACTACACCAAGCTGGAGGAATTCCTCTCCGGCGTGCTCAACG
TCTACGGCGAGAAGCTGCTGCGCTACAAGGGCGTGCTGTACATGGAGGGCGTCGACCGCAAGGTAGTGTTCCAGGGCGTG
CACCAGCTGATGGGCAGCGACGTGGGCGGCAAGTGGGACGGCGAGACGCCGGGCAACCGCATGGTCTTCATCGGCGTGGA
CCTGCCGCGCGACACCATCCTGAAGGGCCTGGAGAACTGCCTGGCCTGA

Upstream 100 bases:

>100_bases
CGCCCGCCCTGCCTGCCGGCTTCGCCGCCGACCACGCCGAACTCACCATCAAGGGCTGCTGCGCCGACTGCGCCGCCCGC
CACCAGACAGGAAACGCACC

Downstream 100 bases:

>100_bases
CGCGGCCGCCGCCCCCCTCGTTTGCGGCGCGCGGCCCGGGATGTCCGGGCCGCATTTCATGTCCGTGTTTCTCCGATAGT
TCGGGTAAGATCGTTCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSKLIPVTILTGFLGSGKTTLLKRILTEQHGMKIAVIENEFGEENIDNDILVQDGNEQIVQMSNGCICCTIRGDLVAALS
DLLTRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAARYLLDAVITLVDAKHGNQQLDRQEEAQRQVGFADAIFIT
KGDLVSDDDVEALRHRLLHMNPRAPIRTANFGEAPIDTIFDLRGFNLNAKLEIDPDFLREDDHDHDHGHEHNHACSPDCD
HDHEHGHDHHHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNVYGEKLLRYKGVLYMEGVDRKVVFQGV
HQLMGSDVGGKWDGETPGNRMVFIGVDLPRDTILKGLENCLA

Sequences:

>Translated_362_residues
MSKLIPVTILTGFLGSGKTTLLKRILTEQHGMKIAVIENEFGEENIDNDILVQDGNEQIVQMSNGCICCTIRGDLVAALS
DLLTRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAARYLLDAVITLVDAKHGNQQLDRQEEAQRQVGFADAIFIT
KGDLVSDDDVEALRHRLLHMNPRAPIRTANFGEAPIDTIFDLRGFNLNAKLEIDPDFLREDDHDHDHGHEHNHACSPDCD
HDHEHGHDHHHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNVYGEKLLRYKGVLYMEGVDRKVVFQGV
HQLMGSDVGGKWDGETPGNRMVFIGVDLPRDTILKGLENCLA
>Mature_361_residues
SKLIPVTILTGFLGSGKTTLLKRILTEQHGMKIAVIENEFGEENIDNDILVQDGNEQIVQMSNGCICCTIRGDLVAALSD
LLTRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIAARYLLDAVITLVDAKHGNQQLDRQEEAQRQVGFADAIFITK
GDLVSDDDVEALRHRLLHMNPRAPIRTANFGEAPIDTIFDLRGFNLNAKLEIDPDFLREDDHDHDHGHEHNHACSPDCDH
DHEHGHDHHHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNVYGEKLLRYKGVLYMEGVDRKVVFQGVH
QLMGSDVGGKWDGETPGNRMVFIGVDLPRDTILKGLENCLA

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=376, Percent_Identity=32.1808510638298, Blast_Score=172, Evalue=3e-43,
Organism=Homo sapiens, GI126722884, Length=376, Percent_Identity=32.1808510638298, Blast_Score=172, Evalue=3e-43,
Organism=Homo sapiens, GI148727351, Length=376, Percent_Identity=31.9148936170213, Blast_Score=168, Evalue=6e-42,
Organism=Homo sapiens, GI146231952, Length=374, Percent_Identity=31.5508021390374, Blast_Score=168, Evalue=9e-42,
Organism=Homo sapiens, GI223941779, Length=377, Percent_Identity=32.3607427055703, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI223941776, Length=366, Percent_Identity=30.8743169398907, Blast_Score=154, Evalue=8e-38,
Organism=Homo sapiens, GI119120938, Length=218, Percent_Identity=34.8623853211009, Blast_Score=125, Evalue=4e-29,
Organism=Escherichia coli, GI87082430, Length=349, Percent_Identity=40.974212034384, Blast_Score=237, Evalue=8e-64,
Organism=Escherichia coli, GI1788499, Length=176, Percent_Identity=31.8181818181818, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324356, Length=405, Percent_Identity=26.6666666666667, Blast_Score=127, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 40649; Mature: 40518

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLIPVTILTGFLGSGKTTLLKRILTEQHGMKIAVIENEFGEENIDNDILVQDGNEQIV
CCCCEEHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCHHEE
QMSNGCICCTIRGDLVAALSDLLTRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIA
EECCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCEEEECCHHHH
ARYLLDAVITLVDAKHGNQQLDRQEEAQRQVGFADAIFITKGDLVSDDDVEALRHRLLHM
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCC
NPRAPIRTANFGEAPIDTIFDLRGFNLNAKLEIDPDFLREDDHDHDHGHEHNHACSPDCD
CCCCCCEECCCCCCCHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCC
HDHEHGHDHHHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNVYGEKLL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWDGETPGNRMVFIGVDLPRDTILKGLENC
HHCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
LA
CC
>Mature Secondary Structure 
SKLIPVTILTGFLGSGKTTLLKRILTEQHGMKIAVIENEFGEENIDNDILVQDGNEQIV
CCCEEHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCHHEE
QMSNGCICCTIRGDLVAALSDLLTRRDKGELQFDRVVIETTGVANPGPVAQTFFMDDEIA
EECCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCEEEECCHHHH
ARYLLDAVITLVDAKHGNQQLDRQEEAQRQVGFADAIFITKGDLVSDDDVEALRHRLLHM
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCC
NPRAPIRTANFGEAPIDTIFDLRGFNLNAKLEIDPDFLREDDHDHDHGHEHNHACSPDCD
CCCCCCEECCCCCCCHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCC
HDHEHGHDHHHGHGHHHHHGHAHHTDRIASFVFRSERPFNYTKLEEFLSGVLNVYGEKLL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RYKGVLYMEGVDRKVVFQGVHQLMGSDVGGKWDGETPGNRMVFIGVDLPRDTILKGLENC
HHCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHH
LA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]