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The map label for this gene is slmA [H]

Identifier: 17544750

GI number: 17544750

Start: 37200

End: 37856

Strand: Reverse

Name: slmA [H]

Synonym: RSc0031

Alternate gene names: 17544750

Gene position: 37856-37200 (Counterclockwise)

Preceding gene: 17544751

Following gene: 17544748

Centisome position: 1.02

GC content: 70.02

Gene sequence:

>657_bases
ATGAGCAACGCGCAGACAGGCTTTCCGCCGGCCGAGCTACAGCCGCAGCCGGCCGCCGAAGCACCCGCAACGCCCGCCCG
CAAGCGCCCGCGCCCTGGCGAGCGCCGCGTGCAGATCCTGCAGACGCTGGCCAGCATGCTGGAGCAGCCGCGTGGCGAAA
AAATCACCACGGCCGGTCTGGCCGCCAGGCTGGATGTCTCCGAAGCCGCGCTCTACCGGCACTTCGCCAGCAAGGCGCAG
ATGTTCGAGGGGCTGATCGAATTCATCGAGCAAACCGTGTTCGGCCTGATCAACCAGATCACGCTGCGCGAAGAGCACGG
CCTGCGCCAGGCCCACGCCATCGCCCACATGCTGCTGTCGTTCGCCGACAGGAACCCGGGCATGACGCGCGTGCTGGTGG
GCGACGCGCTGGTCGGCGAGGACGAACGCCTGCCCGAGCGCATGGCGCAGTGCATGGACCGCATCGAGGCCTCGCTCAAG
CAGAGCCTGCGCGTGGCGGTCACGCAGGGCGCCTGGCCGGCCGACGCCGACATCGCATCGCGCGCCAACCTGATCGTCTG
CGTGGTGCTGGGGCGCTGGCACCGCTACGCCAAGAGCGGCTTCCGCAGGTCGCCGGTGGAAGGGGCGGAGGCGCAGTTGC
GGGTGCTGCTGGGCTGA

Upstream 100 bases:

>100_bases
GCGTGAAAGTAAAATCGGTGCTTCAACTACAACGAAGGCTTGTCCGCCACGGTCGTGGTTAGCGACAAGCCGCGCGGACG
GGAGAGGGGCCCGACAACTC

Downstream 100 bases:

>100_bases
CCCGGCCGCCCGAAGGAACGCCCCGCCATGCGGGAAATGCCGTTCAGTTAAGCATGACTTGGCAGGCTCGCGGCAACGAG
AGCTGAGTCAACAACAGGGA

Product: nucleoid occlusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSNAQTGFPPAELQPQPAAEAPATPARKRPRPGERRVQILQTLASMLEQPRGEKITTAGLAARLDVSEAALYRHFASKAQ
MFEGLIEFIEQTVFGLINQITLREEHGLRQAHAIAHMLLSFADRNPGMTRVLVGDALVGEDERLPERMAQCMDRIEASLK
QSLRVAVTQGAWPADADIASRANLIVCVVLGRWHRYAKSGFRRSPVEGAEAQLRVLLG

Sequences:

>Translated_218_residues
MSNAQTGFPPAELQPQPAAEAPATPARKRPRPGERRVQILQTLASMLEQPRGEKITTAGLAARLDVSEAALYRHFASKAQ
MFEGLIEFIEQTVFGLINQITLREEHGLRQAHAIAHMLLSFADRNPGMTRVLVGDALVGEDERLPERMAQCMDRIEASLK
QSLRVAVTQGAWPADADIASRANLIVCVVLGRWHRYAKSGFRRSPVEGAEAQLRVLLG
>Mature_217_residues
SNAQTGFPPAELQPQPAAEAPATPARKRPRPGERRVQILQTLASMLEQPRGEKITTAGLAARLDVSEAALYRHFASKAQM
FEGLIEFIEQTVFGLINQITLREEHGLRQAHAIAHMLLSFADRNPGMTRVLVGDALVGEDERLPERMAQCMDRIEASLKQ
SLRVAVTQGAWPADADIASRANLIVCVVLGRWHRYAKSGFRRSPVEGAEAQLRVLLG

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082302, Length=188, Percent_Identity=42.5531914893617, Blast_Score=126, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24011; Mature: 23880

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAQTGFPPAELQPQPAAEAPATPARKRPRPGERRVQILQTLASMLEQPRGEKITTAGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHH
AARLDVSEAALYRHFASKAQMFEGLIEFIEQTVFGLINQITLREEHGLRQAHAIAHMLLS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
FADRNPGMTRVLVGDALVGEDERLPERMAQCMDRIEASLKQSLRVAVTQGAWPADADIAS
HHCCCCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RANLIVCVVLGRWHRYAKSGFRRSPVEGAEAQLRVLLG
CCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHEECC
>Mature Secondary Structure 
SNAQTGFPPAELQPQPAAEAPATPARKRPRPGERRVQILQTLASMLEQPRGEKITTAGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHH
AARLDVSEAALYRHFASKAQMFEGLIEFIEQTVFGLINQITLREEHGLRQAHAIAHMLLS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
FADRNPGMTRVLVGDALVGEDERLPERMAQCMDRIEASLKQSLRVAVTQGAWPADADIAS
HHCCCCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RANLIVCVVLGRWHRYAKSGFRRSPVEGAEAQLRVLLG
CCCEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA