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The map label for this gene is ybeQ [H]

Identifier: 17544743

GI number: 17544743

Start: 28773

End: 29531

Strand: Reverse

Name: ybeQ [H]

Synonym: RSc0024

Alternate gene names: 17544743

Gene position: 29531-28773 (Counterclockwise)

Preceding gene: 17544744

Following gene: 17544740

Centisome position: 0.79

GC content: 72.2

Gene sequence:

>759_bases
ATGGGCAGGCGAACGCAGCAGCACGGCACCCCGCGCACCACCAGGATGACGCTGGCCGCGATCATGCTGGCGGCCGCCGG
ATGGACCGCGCCGGCCCGTGCCGCCACCTCGCCGGCGGACGCCCAGGGCGATGCCGCCGCCCTCACGCAGATCGCCATCG
CGCACTACGAGCACAATGAGTTCGGCCGCGCCATCGACGAGTTCGCCGAAGCCGCTCAGCGCGGCAACCGCCTCGCCCAG
TTCAACTACGCGATGATGCTGATGCGCGGCGAAGGCACCGTCGCGCAGCCCGAGGCGGCCGTCAAATGGCTGCGCCGCGC
CGCCGACAACCAGATGACGCACGCGCAGTTCGCCTACGGCGAGCTGTTCGAGCGCGGCGAGCTGGTGCCGCGCTCCCTGC
CGGAAGCCAACAAGTGGTACGAGCGCGCCGCCGCCGGCGGGCACATCGAGGCGCAGCGCGCGCTGGCGACCAACTACTTC
ACCGGCCGCGGCGTGCCGCGCGACTACGGCCGCGCCTTCACCTGGTACAAGAAAGCGGCGGAAGCCGGCGATGGGCCGTC
GCAATACATCGTCGGCAGCTACTACGAGCGCGGCGAGCCCGGCGTGGTGGCACAGGACATCGAACAGGCCAAGCTCTGGT
ACGGCCGCGCCGCGGCACAGGGCGACCCCGGGGCGCTGGCCAAGCTGCGCGAGCTGGTGGAGAAGACCTACCGCGCCAAG
CACGGCGATCCGCCCGCGGCCGCACGCCCCGCCATGTAG

Upstream 100 bases:

>100_bases
GCGCCGGATCGCCCGCGCCGGCAGGTGACCCGGCCACCGCGCCGACGCAGACCGGCGGGGCGCGCTACACTGGGCCCATC
TTCGCGAAGAGGAGTGGGCG

Downstream 100 bases:

>100_bases
CGCACCCGCCAAGAAAAAACCGCCGGGCATGTCGCCATGCCGCGGCGGTCGTCCTGCTCTCTGGGTCTACCCGACACGTT
CGTCGTCAACAACACCGTCC

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MGRRTQQHGTPRTTRMTLAAIMLAAAGWTAPARAATSPADAQGDAAALTQIAIAHYEHNEFGRAIDEFAEAAQRGNRLAQ
FNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYF
TGRGVPRDYGRAFTWYKKAAEAGDGPSQYIVGSYYERGEPGVVAQDIEQAKLWYGRAAAQGDPGALAKLRELVEKTYRAK
HGDPPAAARPAM

Sequences:

>Translated_252_residues
MGRRTQQHGTPRTTRMTLAAIMLAAAGWTAPARAATSPADAQGDAAALTQIAIAHYEHNEFGRAIDEFAEAAQRGNRLAQ
FNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYF
TGRGVPRDYGRAFTWYKKAAEAGDGPSQYIVGSYYERGEPGVVAQDIEQAKLWYGRAAAQGDPGALAKLRELVEKTYRAK
HGDPPAAARPAM
>Mature_251_residues
GRRTQQHGTPRTTRMTLAAIMLAAAGWTAPARAATSPADAQGDAAALTQIAIAHYEHNEFGRAIDEFAEAAQRGNRLAQF
NYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYFT
GRGVPRDYGRAFTWYKKAAEAGDGPSQYIVGSYYERGEPGVVAQDIEQAKLWYGRAAAQGDPGALAKLRELVEKTYRAKH
GDPPAAARPAM

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=188, Percent_Identity=35.1063829787234, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 27527; Mature: 27396

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRTQQHGTPRTTRMTLAAIMLAAAGWTAPARAATSPADAQGDAAALTQIAIAHYEHNE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FGRAIDEFAEAAQRGNRLAQFNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFAYG
HHHHHHHHHHHHHHCCCEEEEHEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYFTGRGVPRDYGRAFTWYKKAA
HHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
EAGDGPSQYIVGSYYERGEPGVVAQDIEQAKLWYGRAAAQGDPGALAKLRELVEKTYRAK
HCCCCCCCCEECHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
HGDPPAAARPAM
CCCCCCCCCCCC
>Mature Secondary Structure 
GRRTQQHGTPRTTRMTLAAIMLAAAGWTAPARAATSPADAQGDAAALTQIAIAHYEHNE
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FGRAIDEFAEAAQRGNRLAQFNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHAQFAYG
HHHHHHHHHHHHHHCCCEEEEHEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYFTGRGVPRDYGRAFTWYKKAA
HHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
EAGDGPSQYIVGSYYERGEPGVVAQDIEQAKLWYGRAAAQGDPGALAKLRELVEKTYRAK
HCCCCCCCCEECHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
HGDPPAAARPAM
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]