| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232661
Identifier: 17232661
GI number: 17232661
Start: 6166966
End: 6167439
Strand: Reverse
Name: 17232661
Synonym: all5169
Alternate gene names: NA
Gene position: 6167439-6166966 (Counterclockwise)
Preceding gene: 17232662
Following gene: 17232659
Centisome position: 96.16
GC content: 41.77
Gene sequence:
>474_bases ATGACAATTACGATCGCACTCAATACAGACACTGTTAATAATCTTGATTTATCACCTGCACATCAGGTAATCAACCAACT GCTGCAAGAGGGAAATATTGCTTCCCACGAACAGCAGTTAAGTTTTGCTATTGAATACACTCTAGAGCCTGGCGATCCCC GCGAATTGTCAGAAATCCCCGAATTAAGGCTGTGGTTTGTGCGTCTGGATGCCAAGTATCCCTGGTTGCCATTTTTACTA GATTGGAAAGCTGGTGAACTGGGGCGTTACACCGCTATGCTTGTACCACACCAATTCAGTGCAAAAGAAGGCATCCAGTA CAATCCCGAAGCTTTAGAAATCTTTTTGATGCACAAGATTTTTGTTTTAAGTGACTGGTTAAAAGAACAAAAAATACCCT CGCAATCGCGTCTTAAGTCTATGGCGCAAATGCTGGGTTACGAATTAGAAGATGGGTTTTTTGAAATGTTTTAG
Upstream 100 bases:
>100_bases CAGGTTCCGCAGTCACAAAATATAGCGCCGATACCAGAAAGCTGGTACTGTGGATTCTCAAGCATACTGACTGAGCTTAA AAAAAGTAGCTGATGAGTCC
Downstream 100 bases:
>100_bases TTGGGGACAAAAAAGTAAAAAGTAAAAAGATAAAAGATTTTTTCTTTTGACTTTTACCTTTTTACTTTTGCCTTGGACTG GGGATTGGGCGAAAATCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTITIALNTDTVNNLDLSPAHQVINQLLQEGNIASHEQQLSFAIEYTLEPGDPRELSEIPELRLWFVRLDAKYPWLPFLL DWKAGELGRYTAMLVPHQFSAKEGIQYNPEALEIFLMHKIFVLSDWLKEQKIPSQSRLKSMAQMLGYELEDGFFEMF
Sequences:
>Translated_157_residues MTITIALNTDTVNNLDLSPAHQVINQLLQEGNIASHEQQLSFAIEYTLEPGDPRELSEIPELRLWFVRLDAKYPWLPFLL DWKAGELGRYTAMLVPHQFSAKEGIQYNPEALEIFLMHKIFVLSDWLKEQKIPSQSRLKSMAQMLGYELEDGFFEMF >Mature_156_residues TITIALNTDTVNNLDLSPAHQVINQLLQEGNIASHEQQLSFAIEYTLEPGDPRELSEIPELRLWFVRLDAKYPWLPFLLD WKAGELGRYTAMLVPHQFSAKEGIQYNPEALEIFLMHKIFVLSDWLKEQKIPSQSRLKSMAQMLGYELEDGFFEMF
Specific function: Unknown
COG id: COG5474
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18230; Mature: 18099
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITIALNTDTVNNLDLSPAHQVINQLLQEGNIASHEQQLSFAIEYTLEPGDPRELSEIP CEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECCCCCHHHHHCC ELRLWFVRLDAKYPWLPFLLDWKAGELGRYTAMLVPHQFSAKEGIQYNPEALEIFLMHKI CCEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH FVLSDWLKEQKIPSQSRLKSMAQMLGYELEDGFFEMF HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEECC >Mature Secondary Structure TITIALNTDTVNNLDLSPAHQVINQLLQEGNIASHEQQLSFAIEYTLEPGDPRELSEIP EEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECCCCCHHHHHCC ELRLWFVRLDAKYPWLPFLLDWKAGELGRYTAMLVPHQFSAKEGIQYNPEALEIFLMHKI CCEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH FVLSDWLKEQKIPSQSRLKSMAQMLGYELEDGFFEMF HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA