| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232645
Identifier: 17232645
GI number: 17232645
Start: 6149409
End: 6150908
Strand: Reverse
Name: 17232645
Synonym: all5153
Alternate gene names: NA
Gene position: 6150908-6149409 (Counterclockwise)
Preceding gene: 17232655
Following gene: 161353734
Centisome position: 95.9
GC content: 45.2
Gene sequence:
>1500_bases ATGAACCCTTGGCACAAAAGGCCTTTCAGGAAAGTTCTTCTGGGAAGTTCGACTATTTTGAGGTGGCTGATCACACTAGT ACTAGTCTTAGGTTTGGCTAGTTGTAGTGAGAAAGCTGTTAGTCAACAGGTATCCATTAGTGCAAGAGACAAACCTCAGC AGATTTCTCAGCAATTTTCCGAAGTCTCACCACCAGATGTGATTCAAGAATTACGTTCTAATTTAGAAATTTATCAACCA CAGGTGACAATAGTTAACCCTCAACCAGAGGAAGTGATTAGTGACAATACTGTCTCGGTGAGGTTCCAAGTTAAGGATCT GCCAATTTTTAAGCATCCTCAATGGCAGTTAGGCCCTTATCTACACGTAATTGTGGATAATCAACCTTATATGCCCGTTT ATGACTTAAGTCAGCCTTTGGTGTTGTCTGACTTGTCTCCAGGTACTCATACTCTGCGCGTCTTTGCTTCCCGTCCTTGG CATGAAAGTTTTAAAAATGAGGGTGCTTACGCCCAGACGACATTTCACGTTTTTACGAAAAGCGACGACAATAATCCAGA CTCCAGACTACCTCTATTGACTTACAGCAGTCCTCAAGGCAGTTATGGGGCAGAACCAATCTTGTTAGATTTTTACCTGG CTAACGCCCCTTTACATCTAGCTGCGAAAGAGCAATCCAATGACCAATTTAGTGATTGGCGTATTCGCTGCACTATAAAT GGTGAGAGCTTTGTATTTGATCGCTGGCAAGCAGTTTACCTCAAAGGCTTTAAGCCTGGAAAAAATTGGGTGAAGCTGGA ATTCCTGGATAATCAAGGAAATCCAGTCAAGAATGCTTTTAATACTACAGTCAGACTTTTTGACTACCAACCCAATAGTA AAGATACTTTGTCCAGAATTGTTAGGGGAGAATTGAACGCTGAGGAAGTACGTGGCATTGTAGACCCGATTTATGTGGCT AAACCATCGGTTGCAGAACCAACACCTGTGGCAACTCCTAGCCCAGAACCAGAAAAGTCAGCGTTACCGGAAGTTACGGA AATAGTCCCTACCCCTGAAGCTACTGAACCACCACAAACAACAACTCTTGAACCAGAAAAACCTAAAGGCGGTGGATTCT TTAGCCGCCCTCGTCCTCAACCATCTCCTAGTCTGACTCCGACATTACCAGAGGTAACTGAGTCGCCTCTACCACAACCA GAGGTGACACCCATACCATCACCCACAATTACCCCGGAACCGCAACCAGAGGTAACACCCACAGCATCACCGACAGTTAC CCCAGAACCACAGCCAGAGGTAACACCCACAGCATCACCGACAATTACCCCAGAACCACAGCCAGAGGTAACACCTACAT CACCAGCTGAATTAGAAAAACCAGTGACTCAACGGAAGAAAGTCAACTTGGGCGATTACTTCAAACGTCGTCCCCGCCCT ACAGTAACGCCAACACCTACAGTCACAGAACAGCCGACAGAATCATCAGAATCTAGTTGA
Upstream 100 bases:
>100_bases TGGTATGTGATGAAGATTTCAGCTTGTAGGTGATAGTAGGCGATCGCTCAATTCAGCCACAATAATTGCAGTTGTTCAAG ACTATAACTAGGTATAAGGT
Downstream 100 bases:
>100_bases GTGAATTTCATCGGTACGGTGTGTTGTCGCCTAGCGCAACGCACCATCCGAGATTTTTGGTGCGTTCCCCACTAGATTCA CTCCTAAGGCTATTGGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFSEVSPPDVIQELRSNLEIYQP QVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPYLHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPW HESFKNEGAYAQTTFHVFTKSDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRIVRGELNAEEVRGIVDPIYVA KPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQTTTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQP EVTPIPSPTITPEPQPEVTPTASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP TVTPTPTVTEQPTESSESS
Sequences:
>Translated_499_residues MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFSEVSPPDVIQELRSNLEIYQP QVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPYLHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPW HESFKNEGAYAQTTFHVFTKSDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRIVRGELNAEEVRGIVDPIYVA KPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQTTTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQP EVTPIPSPTITPEPQPEVTPTASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP TVTPTPTVTEQPTESSESS >Mature_499_residues MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFSEVSPPDVIQELRSNLEIYQP QVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPYLHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPW HESFKNEGAYAQTTFHVFTKSDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRIVRGELNAEEVRGIVDPIYVA KPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQTTTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQP EVTPIPSPTITPEPQPEVTPTASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP TVTPTPTVTEQPTESSESS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55557; Mature: 55557
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFS CCCHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH EVSPPDVIQELRSNLEIYQPQVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPY HCCCHHHHHHHHCCCEEECCEEEEECCCHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCE LHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPWHESFKNEGAYAQTTFHVFTK EEEEECCCCCCCHHCCCCCEEEECCCCCCEEEEEEECCCHHHHHHCCCCEEEEEEEEEEC SDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEC GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRI CCEEEECCEEEEEEECCCCCCCEEEEEEECCCCCHHHHCCCCEEEEEEECCCCHHHHHHH VRGELNAEEVRGIVDPIYVAKPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQT HHCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCC TTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQPEVTPIPSPTITPEPQPEVTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC TASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCC TVTPTPTVTEQPTESSESS CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFS CCCHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH EVSPPDVIQELRSNLEIYQPQVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPY HCCCHHHHHHHHCCCEEECCEEEEECCCHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCE LHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPWHESFKNEGAYAQTTFHVFTK EEEEECCCCCCCHHCCCCCEEEECCCCCCEEEEEEECCCHHHHHHCCCCEEEEEEEEEEC SDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEC GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRI CCEEEECCEEEEEEECCCCCCCEEEEEEECCCCCHHHHCCCCEEEEEEECCCCHHHHHHH VRGELNAEEVRGIVDPIYVAKPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQT HHCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCC TTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQPEVTPIPSPTITPEPQPEVTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC TASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCC TVTPTPTVTEQPTESSESS CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA