Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17232645

Identifier: 17232645

GI number: 17232645

Start: 6149409

End: 6150908

Strand: Reverse

Name: 17232645

Synonym: all5153

Alternate gene names: NA

Gene position: 6150908-6149409 (Counterclockwise)

Preceding gene: 17232655

Following gene: 161353734

Centisome position: 95.9

GC content: 45.2

Gene sequence:

>1500_bases
ATGAACCCTTGGCACAAAAGGCCTTTCAGGAAAGTTCTTCTGGGAAGTTCGACTATTTTGAGGTGGCTGATCACACTAGT
ACTAGTCTTAGGTTTGGCTAGTTGTAGTGAGAAAGCTGTTAGTCAACAGGTATCCATTAGTGCAAGAGACAAACCTCAGC
AGATTTCTCAGCAATTTTCCGAAGTCTCACCACCAGATGTGATTCAAGAATTACGTTCTAATTTAGAAATTTATCAACCA
CAGGTGACAATAGTTAACCCTCAACCAGAGGAAGTGATTAGTGACAATACTGTCTCGGTGAGGTTCCAAGTTAAGGATCT
GCCAATTTTTAAGCATCCTCAATGGCAGTTAGGCCCTTATCTACACGTAATTGTGGATAATCAACCTTATATGCCCGTTT
ATGACTTAAGTCAGCCTTTGGTGTTGTCTGACTTGTCTCCAGGTACTCATACTCTGCGCGTCTTTGCTTCCCGTCCTTGG
CATGAAAGTTTTAAAAATGAGGGTGCTTACGCCCAGACGACATTTCACGTTTTTACGAAAAGCGACGACAATAATCCAGA
CTCCAGACTACCTCTATTGACTTACAGCAGTCCTCAAGGCAGTTATGGGGCAGAACCAATCTTGTTAGATTTTTACCTGG
CTAACGCCCCTTTACATCTAGCTGCGAAAGAGCAATCCAATGACCAATTTAGTGATTGGCGTATTCGCTGCACTATAAAT
GGTGAGAGCTTTGTATTTGATCGCTGGCAAGCAGTTTACCTCAAAGGCTTTAAGCCTGGAAAAAATTGGGTGAAGCTGGA
ATTCCTGGATAATCAAGGAAATCCAGTCAAGAATGCTTTTAATACTACAGTCAGACTTTTTGACTACCAACCCAATAGTA
AAGATACTTTGTCCAGAATTGTTAGGGGAGAATTGAACGCTGAGGAAGTACGTGGCATTGTAGACCCGATTTATGTGGCT
AAACCATCGGTTGCAGAACCAACACCTGTGGCAACTCCTAGCCCAGAACCAGAAAAGTCAGCGTTACCGGAAGTTACGGA
AATAGTCCCTACCCCTGAAGCTACTGAACCACCACAAACAACAACTCTTGAACCAGAAAAACCTAAAGGCGGTGGATTCT
TTAGCCGCCCTCGTCCTCAACCATCTCCTAGTCTGACTCCGACATTACCAGAGGTAACTGAGTCGCCTCTACCACAACCA
GAGGTGACACCCATACCATCACCCACAATTACCCCGGAACCGCAACCAGAGGTAACACCCACAGCATCACCGACAGTTAC
CCCAGAACCACAGCCAGAGGTAACACCCACAGCATCACCGACAATTACCCCAGAACCACAGCCAGAGGTAACACCTACAT
CACCAGCTGAATTAGAAAAACCAGTGACTCAACGGAAGAAAGTCAACTTGGGCGATTACTTCAAACGTCGTCCCCGCCCT
ACAGTAACGCCAACACCTACAGTCACAGAACAGCCGACAGAATCATCAGAATCTAGTTGA

Upstream 100 bases:

>100_bases
TGGTATGTGATGAAGATTTCAGCTTGTAGGTGATAGTAGGCGATCGCTCAATTCAGCCACAATAATTGCAGTTGTTCAAG
ACTATAACTAGGTATAAGGT

Downstream 100 bases:

>100_bases
GTGAATTTCATCGGTACGGTGTGTTGTCGCCTAGCGCAACGCACCATCCGAGATTTTTGGTGCGTTCCCCACTAGATTCA
CTCCTAAGGCTATTGGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFSEVSPPDVIQELRSNLEIYQP
QVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPYLHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPW
HESFKNEGAYAQTTFHVFTKSDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN
GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRIVRGELNAEEVRGIVDPIYVA
KPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQTTTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQP
EVTPIPSPTITPEPQPEVTPTASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP
TVTPTPTVTEQPTESSESS

Sequences:

>Translated_499_residues
MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFSEVSPPDVIQELRSNLEIYQP
QVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPYLHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPW
HESFKNEGAYAQTTFHVFTKSDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN
GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRIVRGELNAEEVRGIVDPIYVA
KPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQTTTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQP
EVTPIPSPTITPEPQPEVTPTASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP
TVTPTPTVTEQPTESSESS
>Mature_499_residues
MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFSEVSPPDVIQELRSNLEIYQP
QVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPYLHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPW
HESFKNEGAYAQTTFHVFTKSDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN
GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRIVRGELNAEEVRGIVDPIYVA
KPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQTTTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQP
EVTPIPSPTITPEPQPEVTPTASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP
TVTPTPTVTEQPTESSESS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55557; Mature: 55557

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFS
CCCHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
EVSPPDVIQELRSNLEIYQPQVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPY
HCCCHHHHHHHHCCCEEECCEEEEECCCHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCE
LHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPWHESFKNEGAYAQTTFHVFTK
EEEEECCCCCCCHHCCCCCEEEECCCCCCEEEEEEECCCHHHHHHCCCCEEEEEEEEEEC
SDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN
CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEC
GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRI
CCEEEECCEEEEEEECCCCCCCEEEEEEECCCCCHHHHCCCCEEEEEEECCCCHHHHHHH
VRGELNAEEVRGIVDPIYVAKPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQT
HHCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCC
TTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQPEVTPIPSPTITPEPQPEVTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCC
TVTPTPTVTEQPTESSESS
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNPWHKRPFRKVLLGSSTILRWLITLVLVLGLASCSEKAVSQQVSISARDKPQQISQQFS
CCCHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
EVSPPDVIQELRSNLEIYQPQVTIVNPQPEEVISDNTVSVRFQVKDLPIFKHPQWQLGPY
HCCCHHHHHHHHCCCEEECCEEEEECCCHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCE
LHVIVDNQPYMPVYDLSQPLVLSDLSPGTHTLRVFASRPWHESFKNEGAYAQTTFHVFTK
EEEEECCCCCCCHHCCCCCEEEECCCCCCEEEEEEECCCHHHHHHCCCCEEEEEEEEEEC
SDDNNPDSRLPLLTYSSPQGSYGAEPILLDFYLANAPLHLAAKEQSNDQFSDWRIRCTIN
CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEEEC
GESFVFDRWQAVYLKGFKPGKNWVKLEFLDNQGNPVKNAFNTTVRLFDYQPNSKDTLSRI
CCEEEECCEEEEEEECCCCCCCEEEEEEECCCCCHHHHCCCCEEEEEEECCCCHHHHHHH
VRGELNAEEVRGIVDPIYVAKPSVAEPTPVATPSPEPEKSALPEVTEIVPTPEATEPPQT
HHCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCC
TTLEPEKPKGGGFFSRPRPQPSPSLTPTLPEVTESPLPQPEVTPIPSPTITPEPQPEVTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TASPTVTPEPQPEVTPTASPTITPEPQPEVTPTSPAELEKPVTQRKKVNLGDYFKRRPRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCC
TVTPTPTVTEQPTESSESS
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA