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The map label for this gene is crtI [H]

Identifier: 17232615

GI number: 17232615

Start: 6119534

End: 6121045

Strand: Reverse

Name: crtI [H]

Synonym: all5123

Alternate gene names: 17232615

Gene position: 6121045-6119534 (Counterclockwise)

Preceding gene: 17232620

Following gene: 17232614

Centisome position: 95.44

GC content: 46.56

Gene sequence:

>1512_bases
ATGTCTAATATTGTTAAGCAAAATAAACCCCGTGTAGTCGTGATTGGTGCGGGAATAGGCGGACTAACGGCTGGTGCATT
ATTAGCCCATCGCGGTTACAGCGTCCTCATATTAGACCAAGCCCTTGTTCCTGGGGGTTGTGCTTCCACATTTAAACGCC
AAGGATTCACCTTTGATGTGGGTGCAACTCAGGTTGCAGGCTTAGAACCAGGGGGAATCCATCACCGCATCTTTTCGGAA
CTGGAAATAGATTTACCAGATGCAACACCTTGTGACCCTGCTTGTGCAGTTTATTTACCGGGGGAAAATACACCTATCAA
TGTTTGGCGCGACCCAAAAAAGTGGCAGGAAGAACGCCAAAGACAATTTCCTGGGAGTGAACCATTTTGGCAATTGATGG
CTACTTTATTTGATGCCAGTTGGGAGTTTCAAGGACGTGACCCAGTTTTACCGCCGCGTAATTTGTGGGATTTGTGGCAG
TTAACCCAGGCGGTACGTCCTAGTACCTTAGTTACTGTACCCTTCACACTATTTACCGTGGGTGACGCTTTAAGGTTGTG
TGGTTTGGGAAATGACCACCGACTGAGGACATTTTTAGATTTGCAACTCAAACTATATTCTCAAGTCAACGCTGAGGAGA
CGGCTTTACTTTATGCTGCAACGGCGTTGAGTGTGTCCCAACTACCACAGGGATTATTTCACCTAGAAGGTAGTATGCAG
GTATTAAGCGATCGCCTAGTCGAAGCGTTAGAAAGAGATGGCGGTAAATTATTGATGCGTCATACCGTTGAACAAATCAA
AGTGGAAAACGGTAAAGCATCTGCTGTCGTCATCAGAAACCAAAAAACAGGGGAAGTTTGGACAGAAGAAGCAGACCACA
TAGTTGCTAACGTGACTGTGCAGAACCTAGTGCAACTATTAGGCGACAAGGCTCCATCAGGTTATAAGCAGCGTGTCAAT
AAACTCCCCCAAGCATCAGGGGCGTTTGTTGTGTATTTGGGTGTAGATGCTAGTGCTATCCCGCCCGAATGTCCCCCCCA
TTTGCAGTTTTTATATGATGCTGATGGTGTGATTGGGGAGAATAATTCTTTGTTTGTGTCGGTGAGTCATGCTGGTGATG
GTCGCGCGCCAGAAGGAAAAGCTACAATTATTGCCTCATCTTTCGTAGACCCCGAACGGTGGTGGAGTACGGAAGATTAC
CCTGGTTTGAAACAGAAATTTACCCAAGAAGCGATCGCCAAATTAGCCCAATACTTTTATCTCAAACCAGAGACTATTAT
TTATCAAGAAGCTGCTACACCGCGTACCTTTGCCCATTACACAGCACGCGATCGCGGTATAGTCGGTGGTATTGGTCAAA
GAATCCCCACATTCGGCCCCTTTGGTTTTGCCAATCGTACACCCATTGACCATCTGTGGTTAGTCGGTGACTCTACCCAC
CCAGGTGAAGGGACAGCCGGCGTAAGCTACTCGGCTTTAACTGTAGTTAGGCAAATTAATCATAGTCATTAG

Upstream 100 bases:

>100_bases
CCTCAGTGCAATTGTTAGGTTTTTTCTTTAGCGATCGCCCCAACTTCACCGCAATTAGCTTGTAAAATTATGAGTAGTAA
TATTAATTTTTGTAAACTAA

Downstream 100 bases:

>100_bases
TAAGAAATATTCGACTTTTGACTCAATCAGCAATTTATGACACCTGTGTAACTCCTAACAGATAAGGATATATTTATCCT
AAACTTACACTTTAGATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MSNIVKQNKPRVVVIGAGIGGLTAGALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDVGATQVAGLEPGGIHHRIFSE
LEIDLPDATPCDPACAVYLPGENTPINVWRDPKKWQEERQRQFPGSEPFWQLMATLFDASWEFQGRDPVLPPRNLWDLWQ
LTQAVRPSTLVTVPFTLFTVGDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQ
VLSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEEADHIVANVTVQNLVQLLGDKAPSGYKQRVN
KLPQASGAFVVYLGVDASAIPPECPPHLQFLYDADGVIGENNSLFVSVSHAGDGRAPEGKATIIASSFVDPERWWSTEDY
PGLKQKFTQEAIAKLAQYFYLKPETIIYQEAATPRTFAHYTARDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTH
PGEGTAGVSYSALTVVRQINHSH

Sequences:

>Translated_503_residues
MSNIVKQNKPRVVVIGAGIGGLTAGALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDVGATQVAGLEPGGIHHRIFSE
LEIDLPDATPCDPACAVYLPGENTPINVWRDPKKWQEERQRQFPGSEPFWQLMATLFDASWEFQGRDPVLPPRNLWDLWQ
LTQAVRPSTLVTVPFTLFTVGDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQ
VLSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEEADHIVANVTVQNLVQLLGDKAPSGYKQRVN
KLPQASGAFVVYLGVDASAIPPECPPHLQFLYDADGVIGENNSLFVSVSHAGDGRAPEGKATIIASSFVDPERWWSTEDY
PGLKQKFTQEAIAKLAQYFYLKPETIIYQEAATPRTFAHYTARDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTH
PGEGTAGVSYSALTVVRQINHSH
>Mature_502_residues
SNIVKQNKPRVVVIGAGIGGLTAGALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDVGATQVAGLEPGGIHHRIFSEL
EIDLPDATPCDPACAVYLPGENTPINVWRDPKKWQEERQRQFPGSEPFWQLMATLFDASWEFQGRDPVLPPRNLWDLWQL
TQAVRPSTLVTVPFTLFTVGDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQV
LSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEEADHIVANVTVQNLVQLLGDKAPSGYKQRVNK
LPQASGAFVVYLGVDASAIPPECPPHLQFLYDADGVIGENNSLFVSVSHAGDGRAPEGKATIIASSFVDPERWWSTEDYP
GLKQKFTQEAIAKLAQYFYLKPETIIYQEAATPRTFAHYTARDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTHP
GEGTAGVSYSALTVVRQINHSH

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55183; Mature: 55052

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIVKQNKPRVVVIGAGIGGLTAGALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDV
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCEEEC
GATQVAGLEPGGIHHRIFSELEIDLPDATPCDPACAVYLPGENTPINVWRDPKKWQEERQ
CCCEECCCCCCCHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCEECCCCHHHHHHHHH
RQFPGSEPFWQLMATLFDASWEFQGRDPVLPPRNLWDLWQLTQAVRPSTLVTVPFTLFTV
HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHH
GDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQ
HHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHCCHHEECCCHHH
VLSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEEADHIVANVTV
HHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEEEEEEECCCCCCHHHCCCCCEEEEEEH
QNLVQLLGDKAPSGYKQRVNKLPQASGAFVVYLGVDASAIPPECPPHLQFLYDADGVIGE
HHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEECC
NNSLFVSVSHAGDGRAPEGKATIIASSFVDPERWWSTEDYPGLKQKFTQEAIAKLAQYFY
CCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
LKPETIIYQEAATPRTFAHYTARDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTH
CCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
PGEGTAGVSYSALTVVRQINHSH
CCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNIVKQNKPRVVVIGAGIGGLTAGALLAHRGYSVLILDQALVPGGCASTFKRQGFTFDV
CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCEEEC
GATQVAGLEPGGIHHRIFSELEIDLPDATPCDPACAVYLPGENTPINVWRDPKKWQEERQ
CCCEECCCCCCCHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCEECCCCHHHHHHHHH
RQFPGSEPFWQLMATLFDASWEFQGRDPVLPPRNLWDLWQLTQAVRPSTLVTVPFTLFTV
HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHH
GDALRLCGLGNDHRLRTFLDLQLKLYSQVNAEETALLYAATALSVSQLPQGLFHLEGSMQ
HHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHCCHHEECCCHHH
VLSDRLVEALERDGGKLLMRHTVEQIKVENGKASAVVIRNQKTGEVWTEEADHIVANVTV
HHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEEEEEEECCCCCCHHHCCCCCEEEEEEH
QNLVQLLGDKAPSGYKQRVNKLPQASGAFVVYLGVDASAIPPECPPHLQFLYDADGVIGE
HHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCEECC
NNSLFVSVSHAGDGRAPEGKATIIASSFVDPERWWSTEDYPGLKQKFTQEAIAKLAQYFY
CCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
LKPETIIYQEAATPRTFAHYTARDRGIVGGIGQRIPTFGPFGFANRTPIDHLWLVGDSTH
CCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
PGEGTAGVSYSALTVVRQINHSH
CCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8021167; 7721699; 10648776 [H]