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The map label for this gene is hxuB [H]

Identifier: 17232608

GI number: 17232608

Start: 6111322

End: 6113088

Strand: Reverse

Name: hxuB [H]

Synonym: all5116

Alternate gene names: 17232608

Gene position: 6113088-6111322 (Counterclockwise)

Preceding gene: 17232610

Following gene: 17232607

Centisome position: 95.31

GC content: 44.43

Gene sequence:

>1767_bases
ATGAATGTAAATTCAGAATTATTAGTTTCATATACAGAAAATTCCATTACTAAACTCAAACTTCTCAAATATGCTTTTGT
GGTAGCAGCAGTATTATGCGACTATCATCCAGCGATCGCCCAAACACCTGACCCTGGCTCCTTGCCAAAGGATCGTTTAG
AAGATATTCCTACGAGGACTTTACCGTCGGAAGTATTGCAAAAACCATCAGATCAAGAGCAATTACCTGCTCCTACGGAT
CTACTAGAGCAGCAAAATCCAGTAGAAAATGATACTAATGCCAAATTTCGAGTTGATCGTATTGAAGTTGTTGGTAGTCA
AGTTTTCCCACCAGAAAAATTTACCCCTATTACAGATCCCTTCGTGGGACGAGAAGTATCATTTGCAGAACTGTTGCAAG
TTAGAGACGCTATCACCAAACTCTACACTGATAACGGCTATGTAACGACAGGGGCTGTAATTACACCGCAGACAGTAGAA
GCTGGAGTAATTACTATTCAGATAGTAGAAGGCAGTTTGCAGGACATTAAAATAGTTGGTAATCGGCGACTGCGTAGTCA
ATACATTCGCGATCGCATTCAATTGGGTGCTGGTAAGCCACTCAACGTACCGCGCTTAATAGAAAAGCTACAACTACTGC
GCCTCGATCCGCGTATTCAAAATTTGTCAGCCGAGTTGCAAATGGGTGTAGAACCTGGAACTAACATCTTGCAAGTTGAG
GTACAAGAAGCCGATACCTTCTCACTGACAGCAACTTTAGATAATGGGCGATCGCCTAGTGTGGGTAGTTTTCGCCGGGG
GGTAAATCTGCAAGAGGCAAATTTACTAGGTTTAGGCGACACTCTCAGCGTAGGGTACAACAACACAGATGGCAGTAATG
CCATTAATTTAAATTACCAACTGCCCATTAATGCCCGCAATGGTACCGTATCCTTCGGTTTTAACCAGGGGTGGAACCGT
GTAATTGAAGACCCATTCAGCGTCCTAGATATTCAATCCAACACGACCTCTTATGAATTTGGCTATCGACAGCCACTCAT
TCAAAAGCCAACCCAAGAATTAGCGGTGGGGCTATCCTTCTCGCGCCAAGAAAGCCAGACTGAGTTAGGGCTGGATAATA
TTGGTGGGTTTCCTTTATCACCTGGTGCAGATGCAGAAGGAAGAACTAAGATTTCTGCCTTCCGCTTTACCCAGGAGTAT
ACCCAACGCAGCAATGAGCAAGTTTTTGCAGCGCGATCGCAATTTAGCTTGGGAGTAAATTGGTTCGATGCTAATGTGAA
TCAGGATGAACCAGATAGTCGCTTTTTCGCCTGGCGGGGACAGGCGCAATGGGTAAGACAGTTAGCACCAGACACCCTAT
TTTTAGCCAGAGGCGATATTCAACTAGCCTCAACTTCCCTAGTACCCTTGGAACAATTTGGTCTTGGTGGTCAGCAAAGT
GTCCGGGGTTATCGCCAAGATACATTACTTACAGATAATGGTTTATTGTTGTCTGGAGAATTGAGGTTACCGATTGTCCG
TGCTGATAACTTGGGAGGCGTGCTACAACTAACACCATTTATCGACATAGGCACAGGCTGGAATACCCAAGGTAGTAACC
CGTCACCAAGTACCTTTGTGGGTACTGGGTTGGGGCTGCTATGGAAACAAGGGGATAGTTTCTCAGTTAGGCTAGATTGG
GGTATTCCTCTAACATCCGTAGATGGTGAAAAGCGATCGCTCCAAGAAAATGGTTTGTACTTCTCATTACAATATTCTCC
GTTTTAA

Upstream 100 bases:

>100_bases
TGAGGAAAAACCGTATTTATGCTGATGATTACTGTAAAAAATATAGAGATCATGTGTAATTAAACATACCCGTTAAACCA
AAGTATCGGGATTTAAATAT

Downstream 100 bases:

>100_bases
TACCTGTTTTGCCCCTGAGGCCTTCTTGTAGTTTATTTGTGCCTAAGATACGGATATTTATACATTGGGCGGATCGCTTA
CACGCCCTAACCTCTAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MNVNSELLVSYTENSITKLKLLKYAFVVAAVLCDYHPAIAQTPDPGSLPKDRLEDIPTRTLPSEVLQKPSDQEQLPAPTD
LLEQQNPVENDTNAKFRVDRIEVVGSQVFPPEKFTPITDPFVGREVSFAELLQVRDAITKLYTDNGYVTTGAVITPQTVE
AGVITIQIVEGSLQDIKIVGNRRLRSQYIRDRIQLGAGKPLNVPRLIEKLQLLRLDPRIQNLSAELQMGVEPGTNILQVE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYNNTDGSNAINLNYQLPINARNGTVSFGFNQGWNR
VIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSFSRQESQTELGLDNIGGFPLSPGADAEGRTKISAFRFTQEY
TQRSNEQVFAARSQFSLGVNWFDANVNQDEPDSRFFAWRGQAQWVRQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQQS
VRGYRQDTLLTDNGLLLSGELRLPIVRADNLGGVLQLTPFIDIGTGWNTQGSNPSPSTFVGTGLGLLWKQGDSFSVRLDW
GIPLTSVDGEKRSLQENGLYFSLQYSPF

Sequences:

>Translated_588_residues
MNVNSELLVSYTENSITKLKLLKYAFVVAAVLCDYHPAIAQTPDPGSLPKDRLEDIPTRTLPSEVLQKPSDQEQLPAPTD
LLEQQNPVENDTNAKFRVDRIEVVGSQVFPPEKFTPITDPFVGREVSFAELLQVRDAITKLYTDNGYVTTGAVITPQTVE
AGVITIQIVEGSLQDIKIVGNRRLRSQYIRDRIQLGAGKPLNVPRLIEKLQLLRLDPRIQNLSAELQMGVEPGTNILQVE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYNNTDGSNAINLNYQLPINARNGTVSFGFNQGWNR
VIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSFSRQESQTELGLDNIGGFPLSPGADAEGRTKISAFRFTQEY
TQRSNEQVFAARSQFSLGVNWFDANVNQDEPDSRFFAWRGQAQWVRQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQQS
VRGYRQDTLLTDNGLLLSGELRLPIVRADNLGGVLQLTPFIDIGTGWNTQGSNPSPSTFVGTGLGLLWKQGDSFSVRLDW
GIPLTSVDGEKRSLQENGLYFSLQYSPF
>Mature_588_residues
MNVNSELLVSYTENSITKLKLLKYAFVVAAVLCDYHPAIAQTPDPGSLPKDRLEDIPTRTLPSEVLQKPSDQEQLPAPTD
LLEQQNPVENDTNAKFRVDRIEVVGSQVFPPEKFTPITDPFVGREVSFAELLQVRDAITKLYTDNGYVTTGAVITPQTVE
AGVITIQIVEGSLQDIKIVGNRRLRSQYIRDRIQLGAGKPLNVPRLIEKLQLLRLDPRIQNLSAELQMGVEPGTNILQVE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYNNTDGSNAINLNYQLPINARNGTVSFGFNQGWNR
VIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSFSRQESQTELGLDNIGGFPLSPGADAEGRTKISAFRFTQEY
TQRSNEQVFAARSQFSLGVNWFDANVNQDEPDSRFFAWRGQAQWVRQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQQS
VRGYRQDTLLTDNGLLLSGELRLPIVRADNLGGVLQLTPFIDIGTGWNTQGSNPSPSTFVGTGLGLLWKQGDSFSVRLDW
GIPLTSVDGEKRSLQENGLYFSLQYSPF

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2 [H]

EC number: NA

Molecular weight: Translated: 64920; Mature: 64920

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNSELLVSYTENSITKLKLLKYAFVVAAVLCDYHPAIAQTPDPGSLPKDRLEDIPTRT
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCC
LPSEVLQKPSDQEQLPAPTDLLEQQNPVENDTNAKFRVDRIEVVGSQVFPPEKFTPITDP
CCHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC
FVGREVSFAELLQVRDAITKLYTDNGYVTTGAVITPQTVEAGVITIQIVEGSLQDIKIVG
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECEEECCCCCCCCEEEEEEECCCCCEEEEEC
NRRLRSQYIRDRIQLGAGKPLNVPRLIEKLQLLRLDPRIQNLSAELQMGVEPGTNILQVE
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCEEEEE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYNNTDGSNAINLNYQ
EECCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEE
LPINARNGTVSFGFNQGWNRVIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSF
EEEECCCCEEEECCCCCCHHHHCCCCEEEEECCCCCEEECCCCCCHHHCCHHHHHCCCCC
SRQESQTELGLDNIGGFPLSPGADAEGRTKISAFRFTQEYTQRSNEQVFAARSQFSLGVN
CCCCCHHHCCHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCEEECEE
WFDANVNQDEPDSRFFAWRGQAQWVRQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQQS
EEECCCCCCCCCCCEEEECCHHHHHHHCCCCEEEEEECCEEEECCCCCCHHHHCCCCHHH
VRGYRQDTLLTDNGLLLSGELRLPIVRADNLGGVLQLTPFIDIGTGWNTQGSNPSPSTFV
HCCCCCCEEEECCCEEEECCEEEEEEEECCCCCEEEEECEEEECCCCCCCCCCCCCCCEE
GTGLGLLWKQGDSFSVRLDWGIPLTSVDGEKRSLQENGLYFSLQYSPF
ECCCEEEEECCCCEEEEEECCCEEECCCCHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MNVNSELLVSYTENSITKLKLLKYAFVVAAVLCDYHPAIAQTPDPGSLPKDRLEDIPTRT
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCC
LPSEVLQKPSDQEQLPAPTDLLEQQNPVENDTNAKFRVDRIEVVGSQVFPPEKFTPITDP
CCHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC
FVGREVSFAELLQVRDAITKLYTDNGYVTTGAVITPQTVEAGVITIQIVEGSLQDIKIVG
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECEEECCCCCCCCEEEEEEECCCCCEEEEEC
NRRLRSQYIRDRIQLGAGKPLNVPRLIEKLQLLRLDPRIQNLSAELQMGVEPGTNILQVE
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCEEEEE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYNNTDGSNAINLNYQ
EECCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEE
LPINARNGTVSFGFNQGWNRVIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSF
EEEECCCCEEEECCCCCCHHHHCCCCEEEEECCCCCEEECCCCCCHHHCCHHHHHCCCCC
SRQESQTELGLDNIGGFPLSPGADAEGRTKISAFRFTQEYTQRSNEQVFAARSQFSLGVN
CCCCCHHHCCHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCEEECEE
WFDANVNQDEPDSRFFAWRGQAQWVRQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQQS
EEECCCCCCCCCCCEEEECCHHHHHHHCCCCEEEEEECCEEEECCCCCCHHHHCCCCHHH
VRGYRQDTLLTDNGLLLSGELRLPIVRADNLGGVLQLTPFIDIGTGWNTQGSNPSPSTFV
HCCCCCCEEEECCCEEEECCEEEEEEEECCCCCEEEEECEEEECCCCCCCCCCCCCCCEE
GTGLGLLWKQGDSFSVRLDWGIPLTSVDGEKRSLQENGLYFSLQYSPF
ECCCEEEEECCCCEEEEEECCCEEECCCCHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]