Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17232512

Identifier: 17232512

GI number: 17232512

Start: 5992220

End: 5992771

Strand: Reverse

Name: 17232512

Synonym: all5020

Alternate gene names: NA

Gene position: 5992771-5992220 (Counterclockwise)

Preceding gene: 17232514

Following gene: 17232511

Centisome position: 93.44

GC content: 41.67

Gene sequence:

>552_bases
ATGACCGTAACTACCTATAAATGGACAATAGAACGCTATCACCGAGCAATAGAAGCAGGCATTTTTGACGACCAGCCTCT
GGAATTATTGCGCGGCGACCTGATTGTTATGCCTCCAGAACGAGAACCTCACGCCTACTACAACACAGAAGCCGCAGATT
ATCTCCGCACATTACTTGGTGAGCGAGTAAAAATCCGTGATGCTAAACCAATTACCTTACCTAACGATTCTGAACCTGCA
CCCGATGTTGCTATTGTCAAACCTTTAGGTGAGACTTACTTAAAACATCACCCTTACCCAGAAGATATTTTTTGGGTAAT
TGAATTTGCTAATGCCACCTTAACTAAAGACTTGGGTGATAAAAAAGAAATCTATGCTGAGGCTGGTATTACTGAATATT
GGGTTGTTAACTTAAAAAGTCCCCAGTTAAAAGTCTTTCGTGACCTCAACAATCAGCAATATACGACCGAACTAACCCTC
ACAACAGGAACTGTTTCACCCTTAGCCTTTCCTGATGTATCAATACGAGTTGAACGCCTTATAGGTGTATGA

Upstream 100 bases:

>100_bases
CGCCTGCCTCAGAATTATGATTATCGTACACTTGCCCCAAAGGTTAAAATCAAACTAAACTTCTTGTGTTTACGGTACAA
CCAAAGCTAAATCAAGTGTT

Downstream 100 bases:

>100_bases
AAAAAACACCAAAAAATATGACTGTTCCAGCAACCTTCATGATATGGGAACATATATAAGTTGTAGCTGACCACCCAGAT
AGAGGTTGAAAGTGGATACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTVTTYKWTIERYHRAIEAGIFDDQPLELLRGDLIVMPPEREPHAYYNTEAADYLRTLLGERVKIRDAKPITLPNDSEPA
PDVAIVKPLGETYLKHHPYPEDIFWVIEFANATLTKDLGDKKEIYAEAGITEYWVVNLKSPQLKVFRDLNNQQYTTELTL
TTGTVSPLAFPDVSIRVERLIGV

Sequences:

>Translated_183_residues
MTVTTYKWTIERYHRAIEAGIFDDQPLELLRGDLIVMPPEREPHAYYNTEAADYLRTLLGERVKIRDAKPITLPNDSEPA
PDVAIVKPLGETYLKHHPYPEDIFWVIEFANATLTKDLGDKKEIYAEAGITEYWVVNLKSPQLKVFRDLNNQQYTTELTL
TTGTVSPLAFPDVSIRVERLIGV
>Mature_182_residues
TVTTYKWTIERYHRAIEAGIFDDQPLELLRGDLIVMPPEREPHAYYNTEAADYLRTLLGERVKIRDAKPITLPNDSEPAP
DVAIVKPLGETYLKHHPYPEDIFWVIEFANATLTKDLGDKKEIYAEAGITEYWVVNLKSPQLKVFRDLNNQQYTTELTLT
TGTVSPLAFPDVSIRVERLIGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20960; Mature: 20829

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTTYKWTIERYHRAIEAGIFDDQPLELLRGDLIVMPPEREPHAYYNTEAADYLRTLLG
CCEEEEEHHHHHHHHHHHHCCCCCCCHHHHCCCEEEECCCCCCCCEECCCHHHHHHHHHC
ERVKIRDAKPITLPNDSEPAPDVAIVKPLGETYLKHHPYPEDIFWVIEFANATLTKDLGD
CCEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCEEEEEEECCCEECCCCCC
KKEIYAEAGITEYWVVNLKSPQLKVFRDLNNQQYTTELTLTTGTVSPLAFPDVSIRVERL
HHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCEEEEEEEEEECCCCCCCCCCHHEEHHHH
IGV
HCC
>Mature Secondary Structure 
TVTTYKWTIERYHRAIEAGIFDDQPLELLRGDLIVMPPEREPHAYYNTEAADYLRTLLG
CEEEEEHHHHHHHHHHHHCCCCCCCHHHHCCCEEEECCCCCCCCEECCCHHHHHHHHHC
ERVKIRDAKPITLPNDSEPAPDVAIVKPLGETYLKHHPYPEDIFWVIEFANATLTKDLGD
CCEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCEEEEEEECCCEECCCCCC
KKEIYAEAGITEYWVVNLKSPQLKVFRDLNNQQYTTELTLTTGTVSPLAFPDVSIRVERL
HHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCEEEEEEEEEECCCCCCCCCCHHEEHHHH
IGV
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA