| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is yqiA [C]
Identifier: 17232459
GI number: 17232459
Start: 5929366
End: 5930019
Strand: Reverse
Name: yqiA [C]
Synonym: all4967
Alternate gene names: 17232459
Gene position: 5930019-5929366 (Counterclockwise)
Preceding gene: 17232460
Following gene: 17232458
Centisome position: 92.46
GC content: 44.04
Gene sequence:
>654_bases ATGACCAAATACATCTACCTCCACGGTTTTGCTTCCAGCCCCCTATCTGCGAAAGCACAAGATATTAGCAAGCGTTTCGC CCAAATTCACATACAGCTAACAATCCCTGATCTCAATGCTGGTGAATTTTCTCAGTTAACAATCACGCGCCAAATTCAAC AAGTTGCCGCAATTTTCCCTGATAATTCTGAACCAATAACGCTGATAGGTTCTAGTTTAGGCGGTTTAACTGCTGCTTAT CTAGGACAGCGATATTTACAAGTACAACGCTTAGTTTTATTAGCGCCAGCATTTGGTTTTTTATCCCATTGGTTGCCCAA AATGGGTGAAGAAGCTGTACAAAGTTGGCAACAAAACGGATATTACCCGGTTTACCATTATGGCGAAGGGAAGTCGCTTC CCCTAAGTTACAATTTCGTCACAGATGCGGCTCAATACCAAGAAGACCAAATACAACGCCCCGTCCCCACCTTGATTTTG CATGGCAAACAAGATGAAGTCATCCCCATCACAGCCAGCCGCGATTTTGCTCATTTCCGTCCTTGGGTGGAACTAATAGA ACTCGACAGCGACCACGCCTTAGGTAATGTCATGGAAGAAATATGGCAAGCAATTAGCCTATTTTGTCAGTTACCCGAAA GCGGTAGAATATGA
Upstream 100 bases:
>100_bases CCGAGGAATTTGTCACTATGCGATGAAGTAAGTAGGAAGCAGGGAGCAGGGGAAAGAAAATTGACAACTGTACAGACGCG ATTAATCGCGTCTCTGAGCA
Downstream 100 bases:
>100_bases ACTCTCCTGATAAATGTTTTGTGTCAGTTGTTAGTTGTAATTTGCTATTGACCACTGACAACTGACCACTGACAACTGAT TAATTATGCTTCCTTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTKYIYLHGFASSPLSAKAQDISKRFAQIHIQLTIPDLNAGEFSQLTITRQIQQVAAIFPDNSEPITLIGSSLGGLTAAY LGQRYLQVQRLVLLAPAFGFLSHWLPKMGEEAVQSWQQNGYYPVYHYGEGKSLPLSYNFVTDAAQYQEDQIQRPVPTLIL HGKQDEVIPITASRDFAHFRPWVELIELDSDHALGNVMEEIWQAISLFCQLPESGRI
Sequences:
>Translated_217_residues MTKYIYLHGFASSPLSAKAQDISKRFAQIHIQLTIPDLNAGEFSQLTITRQIQQVAAIFPDNSEPITLIGSSLGGLTAAY LGQRYLQVQRLVLLAPAFGFLSHWLPKMGEEAVQSWQQNGYYPVYHYGEGKSLPLSYNFVTDAAQYQEDQIQRPVPTLIL HGKQDEVIPITASRDFAHFRPWVELIELDSDHALGNVMEEIWQAISLFCQLPESGRI >Mature_216_residues TKYIYLHGFASSPLSAKAQDISKRFAQIHIQLTIPDLNAGEFSQLTITRQIQQVAAIFPDNSEPITLIGSSLGGLTAAYL GQRYLQVQRLVLLAPAFGFLSHWLPKMGEEAVQSWQQNGYYPVYHYGEGKSLPLSYNFVTDAAQYQEDQIQRPVPTLILH GKQDEVIPITASRDFAHFRPWVELIELDSDHALGNVMEEIWQAISLFCQLPESGRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24448; Mature: 24317
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYIYLHGFASSPLSAKAQDISKRFAQIHIQLTIPDLNAGEFSQLTITRQIQQVAAIFP CCEEEEEEECCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC DNSEPITLIGSSLGGLTAAYLGQRYLQVQRLVLLAPAFGFLSHWLPKMGEEAVQSWQQNG CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC YYPVYHYGEGKSLPLSYNFVTDAAQYQEDQIQRPVPTLILHGKQDEVIPITASRDFAHFR CEEEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCHHHHH PWVELIELDSDHALGNVMEEIWQAISLFCQLPESGRI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKYIYLHGFASSPLSAKAQDISKRFAQIHIQLTIPDLNAGEFSQLTITRQIQQVAAIFP CEEEEEEECCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC DNSEPITLIGSSLGGLTAAYLGQRYLQVQRLVLLAPAFGFLSHWLPKMGEEAVQSWQQNG CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC YYPVYHYGEGKSLPLSYNFVTDAAQYQEDQIQRPVPTLILHGKQDEVIPITASRDFAHFR CEEEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCHHHHH PWVELIELDSDHALGNVMEEIWQAISLFCQLPESGRI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA