Click here to switch to the map view.

The map label for this gene is 17232442

Identifier: 17232442

GI number: 17232442

Start: 5904398

End: 5905189

Strand: Reverse

Name: 17232442

Synonym: all4950

Alternate gene names: NA

Gene position: 5905189-5904398 (Counterclockwise)

Preceding gene: 17232447

Following gene: 17232440

Centisome position: 92.07

GC content: 40.28

Gene sequence:

>792_bases
ATGTCCCGACAAATAAGACAATTTCAACCAGGATATTCTTACCACATCACCATTCGGTGTAATAACCGTGAGTTCCGTTT
AACAAGGTGGGAATGTCGTCAAGTTTTACTTTATGCCATCAAAAAGGCTATAGATAAATACCAGTTTAAATTGTACGGTT
TGTGCATCATGTGCATCATGAGTAATCATATTCATTATCTCATCGAACCGCGCGAACCTCAAGATGTACCCAAAATTATG
CACTGGTTAAATTGGTATACTGCCATGTGTTTTAACCAAATGCTCAACCGTACAGGACATTTTTGGGAAAAGCGTTATCA
CAGTACGGAGTTTGAGAATACAGATAAAAAAAGGGCTTTAAATACTTTGCGTTATATCCATGCTAACCCGAAGGCGGCGG
GGGTACAGCAAGGATTTTTTTATGACTTTAGTAATTATGGTGTCCATGATCGCTTAGGTGATGATGGTATCACTACTTGG
CATCCGGCGTTTTTGTCTCTGGGGAAGACTTTGGATGAATGTGCGGCGAAATATCGAGGGTTTTGTAAAAAATACCGTCC
CCAACCTAAACCGGAAAAGCGACATCGTTGGGGAAATCGGTTATTGGCAGGGATGAAACCTAAAGGTAAAGGTAAAAAGT
GTTCACCGGGACAGTTGAAGTTACTTTGGGATGACTGGGAAATGGATAATGAGGAAATTGAACGGGTAGCGTCTAAGTTT
GTTAAAGCGAATTGTTATAACCCTAACCCTATAGCTAAGGATAATGTACTACAAAAAGAAGAGCCAGAATGA

Upstream 100 bases:

>100_bases
GTTTTTTGTTGTCATAATCTCTCATATTTCACCATGTTACTTCTTCTGCTCAGAGTTACTCATCAGCCTGTTTTAAGACA
GTCGCTACATTTAGTTTTAT

Downstream 100 bases:

>100_bases
AAAAACGCAGTGCCAGGTATCGAAAACCCAGAACCCGCAAGGCTTCGTAAGAAATCGCCTATTCATAAAAGTTAATAATT
CTCTGTAACCTTTATATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSRQIRQFQPGYSYHITIRCNNREFRLTRWECRQVLLYAIKKAIDKYQFKLYGLCIMCIMSNHIHYLIEPREPQDVPKIM
HWLNWYTAMCFNQMLNRTGHFWEKRYHSTEFENTDKKRALNTLRYIHANPKAAGVQQGFFYDFSNYGVHDRLGDDGITTW
HPAFLSLGKTLDECAAKYRGFCKKYRPQPKPEKRHRWGNRLLAGMKPKGKGKKCSPGQLKLLWDDWEMDNEEIERVASKF
VKANCYNPNPIAKDNVLQKEEPE

Sequences:

>Translated_263_residues
MSRQIRQFQPGYSYHITIRCNNREFRLTRWECRQVLLYAIKKAIDKYQFKLYGLCIMCIMSNHIHYLIEPREPQDVPKIM
HWLNWYTAMCFNQMLNRTGHFWEKRYHSTEFENTDKKRALNTLRYIHANPKAAGVQQGFFYDFSNYGVHDRLGDDGITTW
HPAFLSLGKTLDECAAKYRGFCKKYRPQPKPEKRHRWGNRLLAGMKPKGKGKKCSPGQLKLLWDDWEMDNEEIERVASKF
VKANCYNPNPIAKDNVLQKEEPE
>Mature_262_residues
SRQIRQFQPGYSYHITIRCNNREFRLTRWECRQVLLYAIKKAIDKYQFKLYGLCIMCIMSNHIHYLIEPREPQDVPKIMH
WLNWYTAMCFNQMLNRTGHFWEKRYHSTEFENTDKKRALNTLRYIHANPKAAGVQQGFFYDFSNYGVHDRLGDDGITTWH
PAFLSLGKTLDECAAKYRGFCKKYRPQPKPEKRHRWGNRLLAGMKPKGKGKKCSPGQLKLLWDDWEMDNEEIERVASKFV
KANCYNPNPIAKDNVLQKEEPE

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31349; Mature: 31218

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQIRQFQPGYSYHITIRCNNREFRLTRWECRQVLLYAIKKAIDKYQFKLYGLCIMCIM
CCCCCCCCCCCCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNHIHYLIEPREPQDVPKIMHWLNWYTAMCFNQMLNRTGHFWEKRYHSTEFENTDKKRAL
HCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
NTLRYIHANPKAAGVQQGFFYDFSNYGVHDRLGDDGITTWHPAFLSLGKTLDECAAKYRG
HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FCKKYRPQPKPEKRHRWGNRLLAGMKPKGKGKKCSPGQLKLLWDDWEMDNEEIERVASKF
HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
VKANCYNPNPIAKDNVLQKEEPE
HHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRQIRQFQPGYSYHITIRCNNREFRLTRWECRQVLLYAIKKAIDKYQFKLYGLCIMCIM
CCCCCCCCCCCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNHIHYLIEPREPQDVPKIMHWLNWYTAMCFNQMLNRTGHFWEKRYHSTEFENTDKKRAL
HCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
NTLRYIHANPKAAGVQQGFFYDFSNYGVHDRLGDDGITTWHPAFLSLGKTLDECAAKYRG
HHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FCKKYRPQPKPEKRHRWGNRLLAGMKPKGKGKKCSPGQLKLLWDDWEMDNEEIERVASKF
HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
VKANCYNPNPIAKDNVLQKEEPE
HHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA