Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17232440

Identifier: 17232440

GI number: 17232440

Start: 5902652

End: 5902837

Strand: Reverse

Name: 17232440

Synonym: asl4948

Alternate gene names: NA

Gene position: 5902837-5902652 (Counterclockwise)

Preceding gene: 17232442

Following gene: 17232439

Centisome position: 92.03

GC content: 42.47

Gene sequence:

>186_bases
GTGATATTTTGTGTCTCTAGTCGTTTAGGGAACATGAGCAAGGAAATTATCTTATATTCAGGGTTTGGTAGTGGTGTGTT
AGCCACAGCGCAACGCACCTCCCCCCTCAACACTTCAGAGATAACCACCAATGAAACTGATTTCCGAACCGTCGATTCCT
GTAAAAATTCAAAAGATGAAGGATAG

Upstream 100 bases:

>100_bases
TTTGTGAAAGTTAACTACCCTTGTTAACCTAAGATAACGGGGGTGTGGTGATATATAGTCAAGTATATTCTAGTTACCAA
TTATAGGTATTTGTAGGGGT

Downstream 100 bases:

>100_bases
GGTGCGGTGGAAGCATCCTAGTATTGTGCAACGGGGAATCGACCAAACGAGTATGGTAATAGACGATGGTCGGGATGATA
ACCCGGAATTTTCGTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MIFCVSSRLGNMSKEIILYSGFGSGVLATAQRTSPLNTSEITTNETDFRTVDSCKNSKDEG

Sequences:

>Translated_61_residues
MIFCVSSRLGNMSKEIILYSGFGSGVLATAQRTSPLNTSEITTNETDFRTVDSCKNSKDEG
>Mature_61_residues
MIFCVSSRLGNMSKEIILYSGFGSGVLATAQRTSPLNTSEITTNETDFRTVDSCKNSKDEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6609; Mature: 6609

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFCVSSRLGNMSKEIILYSGFGSGVLATAQRTSPLNTSEITTNETDFRTVDSCKNSKDE
CEEEECCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCEECCCCCCEECCCCCCCCCC
G
C
>Mature Secondary Structure
MIFCVSSRLGNMSKEIILYSGFGSGVLATAQRTSPLNTSEITTNETDFRTVDSCKNSKDE
CEEEECCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCEECCCCCCEECCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA