| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is wcaJ [C]
Identifier: 17232321
GI number: 17232321
Start: 5748039
End: 5748797
Strand: Reverse
Name: wcaJ [C]
Synonym: all4829
Alternate gene names: 17232321
Gene position: 5748797-5748039 (Counterclockwise)
Preceding gene: 17232322
Following gene: 17232320
Centisome position: 89.63
GC content: 40.32
Gene sequence:
>759_bases ATGACTGCCCAGAGTTCACTCCTCTCCGGCAAACGACGCTTACGGCAAGATGCTAGCTCGTCTATGCGTTCTACAGTCAA GCGTGGTCAAAAAACAAAGACACCTAAAATCAAACCCAAAGGTTTGTCTTTGCAAGGTATCAACGGAGAGTTTGCGAAAA GACTTTTCGATATTGTGTTTTCTTTATTGGTGTTGATCCTATTCTCACCAGTCTATTTAATCTTGGCATCGCTGATTGCT TTAAGCTCAGAAGGCCCAATTTTTTATGTCCAAGAAAGAATCGGCCAAAACTACAAACCCTTTAATTGTATTAAATTCCG GACAATGGTCAGCAACGCTGATGAAGTCCTCATGCAAATGATGGAAACATCACCACAGTTGCGGCAGGAATTTGAAAGTA GTTTTAAGCTCAAAAAAGACCCCAGAATTACTAAGATTGGTCAATTTTTACGAATTACCAGCCTGGATGAATTTCCCCAA TTCTGGAATGTTTTAAAAGGGGATATGAGTGTTGTTGGCCCACGCCCTTTAGTAGCAGAAGAATTACCAAAATATGGTGA TCACATCGAACAAGTTCTAACAATTCGACCAGGGATTACTGGATTATGGCAAGTTTCAGGAAGGAATGACATTCCCTATC CCCGACGAGTGCAAATCGATTTGCATTATGTGAAATCTAGGACTCTCTGGTTGGACTTATGGATTATATTGAAAACAATT GATGTGGTAATCATGCCTAAAAATAACGGAGCATACTGA
Upstream 100 bases:
>100_bases TTGTAATTCTTTTGTATGCTTTTGGCAATTTAACCCCAGAAGCACATCCTTTTGGCTTTAAGATTGGGACTATGTGTGGT GTGGATTATTAAGGAGTATG
Downstream 100 bases:
>100_bases CGAAAAAGAATTTTTTTGCTAGGGGGCATTATTTCCCCCTTCACACAAAGAATATTATGTTCTTCTGGACAATATATTTC AGGTAGTTGGTAATCAGAAA
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTAQSSLLSGKRRLRQDASSSMRSTVKRGQKTKTPKIKPKGLSLQGINGEFAKRLFDIVFSLLVLILFSPVYLILASLIA LSSEGPIFYVQERIGQNYKPFNCIKFRTMVSNADEVLMQMMETSPQLRQEFESSFKLKKDPRITKIGQFLRITSLDEFPQ FWNVLKGDMSVVGPRPLVAEELPKYGDHIEQVLTIRPGITGLWQVSGRNDIPYPRRVQIDLHYVKSRTLWLDLWIILKTI DVVIMPKNNGAY
Sequences:
>Translated_252_residues MTAQSSLLSGKRRLRQDASSSMRSTVKRGQKTKTPKIKPKGLSLQGINGEFAKRLFDIVFSLLVLILFSPVYLILASLIA LSSEGPIFYVQERIGQNYKPFNCIKFRTMVSNADEVLMQMMETSPQLRQEFESSFKLKKDPRITKIGQFLRITSLDEFPQ FWNVLKGDMSVVGPRPLVAEELPKYGDHIEQVLTIRPGITGLWQVSGRNDIPYPRRVQIDLHYVKSRTLWLDLWIILKTI DVVIMPKNNGAY >Mature_251_residues TAQSSLLSGKRRLRQDASSSMRSTVKRGQKTKTPKIKPKGLSLQGINGEFAKRLFDIVFSLLVLILFSPVYLILASLIAL SSEGPIFYVQERIGQNYKPFNCIKFRTMVSNADEVLMQMMETSPQLRQEFESSFKLKKDPRITKIGQFLRITSLDEFPQF WNVLKGDMSVVGPRPLVAEELPKYGDHIEQVLTIRPGITGLWQVSGRNDIPYPRRVQIDLHYVKSRTLWLDLWIILKTID VVIMPKNNGAY
Specific function: May function as a sugar transferase [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=206, Percent_Identity=39.3203883495146, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 28848; Mature: 28717
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQSSLLSGKRRLRQDASSSMRSTVKRGQKTKTPKIKPKGLSLQGINGEFAKRLFDIVF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH SLLVLILFSPVYLILASLIALSSEGPIFYVQERIGQNYKPFNCIKFRTMVSNADEVLMQM HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCHHHHHHHHHCCHHHHHHHH METSPQLRQEFESSFKLKKDPRITKIGQFLRITSLDEFPQFWNVLKGDMSVVGPRPLVAE HHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCHHHH ELPKYGDHIEQVLTIRPGITGLWQVSGRNDIPYPRRVQIDLHYVKSRTLWLDLWIILKTI HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHH DVVIMPKNNGAY CEEEEECCCCCC >Mature Secondary Structure TAQSSLLSGKRRLRQDASSSMRSTVKRGQKTKTPKIKPKGLSLQGINGEFAKRLFDIVF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH SLLVLILFSPVYLILASLIALSSEGPIFYVQERIGQNYKPFNCIKFRTMVSNADEVLMQM HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCHHHHHHHHHCCHHHHHHHH METSPQLRQEFESSFKLKKDPRITKIGQFLRITSLDEFPQFWNVLKGDMSVVGPRPLVAE HHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCHHHH ELPKYGDHIEQVLTIRPGITGLWQVSGRNDIPYPRRVQIDLHYVKSRTLWLDLWIILKTI HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHH DVVIMPKNNGAY CEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]