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The map label for this gene is ygfA [C]

Identifier: 17232317

GI number: 17232317

Start: 5744777

End: 5745358

Strand: Reverse

Name: ygfA [C]

Synonym: all4825

Alternate gene names: 17232317

Gene position: 5745358-5744777 (Counterclockwise)

Preceding gene: 17232318

Following gene: 17232316

Centisome position: 89.58

GC content: 42.27

Gene sequence:

>582_bases
ATGAGCGCAGTGAATGACCATCAAGTATTAACTAAATCTCAATTACGTCGGAGTTTAATCAAAACTCGACAGTCTATGTC
TATTGGAGAATGGCGAGAAAAGAGCGATCGCATCTCTTGTCTATTACAATCTTCCACTCTTTTTACTCAATCCACAACTA
TACTGGCCTATTTCAGCTTTCGTCAAGAACCTGATCTTAGCTCCTTATTTGCCCATACTCACCACCGTTGGGGATTTCCT
CGCTGCGTTGATCAATCCCTGCGGTGGCATAGTTGGATACCTAAAGATTCCTTAAATATCAACGCTTACGGTATCAAAGA
GCCTGATCCACAAGCGCCAACCATAGACCCTGAGGAAGTTGATTTAATTCTCGTTCCCAGCGTTGCTTGTAACTATCAAG
GATACCGTTTAGGCTACGGAGGAGGTTACTACGATCGCCTACTGAGTTCTCCGGAATGGTCAACCAAGCCAAGCATTGGC
ATTGTCTTTGATTTTGCTTATTTGCCTCAATTACCCATAGAAAATTGGGATCAGCCTTTACAAGCAGTCTTGACAGAAAC
ATCTTTTCATGTTAATAGTTAA

Upstream 100 bases:

>100_bases
TTAGGTAATGGGTAATGGGTAATGGGTAATGGGATGAATAATATTTTTGTAACCTCTTCCCAATCCTCAGTACCCTATTT
CCTATACCCCATCTTTGAAT

Downstream 100 bases:

>100_bases
CGGCTAACTGTCAACCGTCAACTGTTAACGAACAGAATGAATTGGAAAACGCAAAATTCACCCTGGCGAACGCTGGTAAT
GTATGGTTTATTAGGTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSAVNDHQVLTKSQLRRSLIKTRQSMSIGEWREKSDRISCLLQSSTLFTQSTTILAYFSFRQEPDLSSLFAHTHHRWGFP
RCVDQSLRWHSWIPKDSLNINAYGIKEPDPQAPTIDPEEVDLILVPSVACNYQGYRLGYGGGYYDRLLSSPEWSTKPSIG
IVFDFAYLPQLPIENWDQPLQAVLTETSFHVNS

Sequences:

>Translated_193_residues
MSAVNDHQVLTKSQLRRSLIKTRQSMSIGEWREKSDRISCLLQSSTLFTQSTTILAYFSFRQEPDLSSLFAHTHHRWGFP
RCVDQSLRWHSWIPKDSLNINAYGIKEPDPQAPTIDPEEVDLILVPSVACNYQGYRLGYGGGYYDRLLSSPEWSTKPSIG
IVFDFAYLPQLPIENWDQPLQAVLTETSFHVNS
>Mature_192_residues
SAVNDHQVLTKSQLRRSLIKTRQSMSIGEWREKSDRISCLLQSSTLFTQSTTILAYFSFRQEPDLSSLFAHTHHRWGFPR
CVDQSLRWHSWIPKDSLNINAYGIKEPDPQAPTIDPEEVDLILVPSVACNYQGYRLGYGGGYYDRLLSSPEWSTKPSIGI
VFDFAYLPQLPIENWDQPLQAVLTETSFHVNS

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=176, Percent_Identity=26.7045454545455, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 22123; Mature: 21992

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVNDHQVLTKSQLRRSLIKTRQSMSIGEWREKSDRISCLLQSSTLFTQSTTILAYFSF
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCEEEECCCEEEEEEEC
RQEPDLSSLFAHTHHRWGFPRCVDQSLRWHSWIPKDSLNINAYGIKEPDPQAPTIDPEEV
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCE
DLILVPSVACNYQGYRLGYGGGYYDRLLSSPEWSTKPSIGIVFDFAYLPQLPIENWDQPL
EEEEECCHHCCCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCCCCHHHH
QAVLTETSFHVNS
HHHHHHCCEECCC
>Mature Secondary Structure 
SAVNDHQVLTKSQLRRSLIKTRQSMSIGEWREKSDRISCLLQSSTLFTQSTTILAYFSF
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCEEEECCCEEEEEEEC
RQEPDLSSLFAHTHHRWGFPRCVDQSLRWHSWIPKDSLNINAYGIKEPDPQAPTIDPEEV
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCE
DLILVPSVACNYQGYRLGYGGGYYDRLLSSPEWSTKPSIGIVFDFAYLPQLPIENWDQPL
EEEEECCHHCCCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCCCCHHHH
QAVLTETSFHVNS
HHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]