| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232288
Identifier: 17232288
GI number: 17232288
Start: 5714994
End: 5715605
Strand: Reverse
Name: 17232288
Synonym: all4796
Alternate gene names: NA
Gene position: 5715605-5714994 (Counterclockwise)
Preceding gene: 17232289
Following gene: 17232285
Centisome position: 89.11
GC content: 38.56
Gene sequence:
>612_bases GTGATCATTGGAAGGCTTATTAAGTGTAATTGCGTAACTATTCTTCACTTTTTAAGCTTGGAGCATTTTTTCATGAAATT AGCTAAAGGTTTAGGTATTGCAACTATTGCGGCAATTTCTGTTGCTGCTGTTGGTGTTCAACCAACACAAGCGGCGATCG TTAATTACAATTTCATCGTTGATGCTACATCTGGCAGCAATCCCGGTCAGTATTTCGGTTCTCTTAAATATGATGACTCA TTCTTAACTGGTTTAGGGCTGGAGACATTGGGAGTTGAGAATGGGTTAGAAGTTAAATTCAACTACTTAGGTAATACCTA TACAGAAGAAGATGATGAATTTTATGATTTATACCCGATAGTTAGCTTTAACGACGGTAAACTTTTGGGACTCAGCTATT TTGTTGCAGACAAGTTTTTCATCGGCAATGAAAATAATCTCGATGTAGGCGGAAATATATTTTATGAAATTGATGGATCA GTATTTGCCACAGAAGTGGGTACTGTCCGCTACAGTCAAGTACCAGAACCCTTTGCAGTTAGTGGTATAGCGATCGCTGC TACCGTAGGACTATTCATGAAGCGTAAGAAAAAAGCCACATTAGTAGGCTAG
Upstream 100 bases:
>100_bases CTTATCTCATAACTCAGTAATCAGCACTTTGCCATATTTCCGTAATTTCACGGTTATGCTGTTTGTATTTAACCCTGGGT TGGGCATTCCTTAACCTCTT
Downstream 100 bases:
>100_bases AAACAATGTTTTAAATATTGTTAGCTAGGCAGGTTTTGTACCTGTCTTTTTTTATTGTCATGTCTCTGTAATTTGAGGTG ATTAGTTCATGCAATAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MIIGRLIKCNCVTILHFLSLEHFFMKLAKGLGIATIAAISVAAVGVQPTQAAIVNYNFIVDATSGSNPGQYFGSLKYDDS FLTGLGLETLGVENGLEVKFNYLGNTYTEEDDEFYDLYPIVSFNDGKLLGLSYFVADKFFIGNENNLDVGGNIFYEIDGS VFATEVGTVRYSQVPEPFAVSGIAIAATVGLFMKRKKKATLVG
Sequences:
>Translated_203_residues MIIGRLIKCNCVTILHFLSLEHFFMKLAKGLGIATIAAISVAAVGVQPTQAAIVNYNFIVDATSGSNPGQYFGSLKYDDS FLTGLGLETLGVENGLEVKFNYLGNTYTEEDDEFYDLYPIVSFNDGKLLGLSYFVADKFFIGNENNLDVGGNIFYEIDGS VFATEVGTVRYSQVPEPFAVSGIAIAATVGLFMKRKKKATLVG >Mature_203_residues MIIGRLIKCNCVTILHFLSLEHFFMKLAKGLGIATIAAISVAAVGVQPTQAAIVNYNFIVDATSGSNPGQYFGSLKYDDS FLTGLGLETLGVENGLEVKFNYLGNTYTEEDDEFYDLYPIVSFNDGKLLGLSYFVADKFFIGNENNLDVGGNIFYEIDGS VFATEVGTVRYSQVPEPFAVSGIAIAATVGLFMKRKKKATLVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22004; Mature: 22004
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGRLIKCNCVTILHFLSLEHFFMKLAKGLGIATIAAISVAAVGVQPTQAAIVNYNFIV CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEE DATSGSNPGQYFGSLKYDDSFLTGLGLETLGVENGLEVKFNYLGNTYTEEDDEFYDLYPI ECCCCCCCHHHCEEEEECCCHHHCCCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEEEE VSFNDGKLLGLSYFVADKFFIGNENNLDVGGNIFYEIDGSVFATEVGTVRYSQVPEPFAV EEECCCCEEEEEEEEEEEEEECCCCCEEECCEEEEEECCCEEEEEECEEEECCCCCCHHC SGIAIAATVGLFMKRKKKATLVG CCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIIGRLIKCNCVTILHFLSLEHFFMKLAKGLGIATIAAISVAAVGVQPTQAAIVNYNFIV CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEE DATSGSNPGQYFGSLKYDDSFLTGLGLETLGVENGLEVKFNYLGNTYTEEDDEFYDLYPI ECCCCCCCHHHCEEEEECCCHHHCCCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEEEE VSFNDGKLLGLSYFVADKFFIGNENNLDVGGNIFYEIDGSVFATEVGTVRYSQVPEPFAV EEECCCCEEEEEEEEEEEEEECCCCCEEECCEEEEEECCCEEEEEECEEEECCCCCCHHC SGIAIAATVGLFMKRKKKATLVG CCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA