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The map label for this gene is yibD [H]

Identifier: 17232285

GI number: 17232285

Start: 5710639

End: 5711580

Strand: Reverse

Name: yibD [H]

Synonym: all4793

Alternate gene names: 17232285

Gene position: 5711580-5710639 (Counterclockwise)

Preceding gene: 17232288

Following gene: 17232284

Centisome position: 89.05

GC content: 43.42

Gene sequence:

>942_bases
GTGTTTATTAGTGTTGTGATACCGACTTACGATCGCCAGCCGATTTTAGAAAAATGCCTCCGCGCCCTAGAGGCGCAACA
ACTCAGCGCATCAACTGTAATTAACGAATATGAAATTGTTTTAGTCGATGATGGTTCGACAGATGGCACATTAGACTGGT
TAGCAACACACAAAGAAGAGTTTCCCCATGTGCGCTGGTTCGAGCAAGACCATGCAGGCCCGGCGGCAGCGCGGAATTTA
GGCGTAGAAAAGGCGCGGGGTGATATAATTATCTTTATAGATAGCGATTTAGTTGTGCTGGACAATTTCCTGCAAGCTCA
TGCAGATGCGTTATTGCAAGGACAAGAGAAATTGGGGAGCGATCGCTTCTTTACATACGGTGCAGTAATTAATACTTGTA
ATTTCGATAATCCTACTGCTGAACCTTATAAAATCACCGATTTTTCCGCCGCTTTTTTCGCTACAGGCAATGTCGCCATC
CCTAAGCATTGGCTAGAACAAGCTGGACTATTTGACACTGGCTTTCAACTCTACGGTTGGGAAGATTTAGAATTAGGTGT
CAGACTCAAAAACCTCGGACTACAACTCATCAAATGTCCGGCGGCTGTCGGCTATCATTGGCATCCACCATTTAATTTAG
AACAAGTACCTAACTTAATCGAGAAGGAAATTCAACGCGGACGTATGGGTGTTTTGTTCTACAAAAAACATCCCACATGG
GAAGTGCGAATGATGATTCAAATGACATGGTTACATCGTTTACTTTGGGGGATTCTTTCGCTTAATGGTGCATTGAATGA
AAACACAATGGCTCCTCTATTGCAATGGTTAATTAAGTCGGGGAAACCCCAGTTAGCTTTGGAAATCGCGCGAATTTTCC
TCAACTGGTACAACGTTAAGGGTGTCTATCAAGCTTATTCCCAAATGCAGAAAGTATCGTAA

Upstream 100 bases:

>100_bases
TATGAGGCAAGTATCTCCGTAATCAGAGTTAGATAAGGAACAGTCGGAAGTACCACACTGTCCTATTCTGGAGATGGGTA
GTAATGTTGTGGGTGAGACT

Downstream 100 bases:

>100_bases
AAAATTAGGTTGACATAAGAGGATAACCTGTGTGTTACCCTAGTATGGCTAACCAAATTCCGCACATCTGGGAATTCGGG
TGTTTCCTGGTGAGGAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MFISVVIPTYDRQPILEKCLRALEAQQLSASTVINEYEIVLVDDGSTDGTLDWLATHKEEFPHVRWFEQDHAGPAAARNL
GVEKARGDIIIFIDSDLVVLDNFLQAHADALLQGQEKLGSDRFFTYGAVINTCNFDNPTAEPYKITDFSAAFFATGNVAI
PKHWLEQAGLFDTGFQLYGWEDLELGVRLKNLGLQLIKCPAAVGYHWHPPFNLEQVPNLIEKEIQRGRMGVLFYKKHPTW
EVRMMIQMTWLHRLLWGILSLNGALNENTMAPLLQWLIKSGKPQLALEIARIFLNWYNVKGVYQAYSQMQKVS

Sequences:

>Translated_313_residues
MFISVVIPTYDRQPILEKCLRALEAQQLSASTVINEYEIVLVDDGSTDGTLDWLATHKEEFPHVRWFEQDHAGPAAARNL
GVEKARGDIIIFIDSDLVVLDNFLQAHADALLQGQEKLGSDRFFTYGAVINTCNFDNPTAEPYKITDFSAAFFATGNVAI
PKHWLEQAGLFDTGFQLYGWEDLELGVRLKNLGLQLIKCPAAVGYHWHPPFNLEQVPNLIEKEIQRGRMGVLFYKKHPTW
EVRMMIQMTWLHRLLWGILSLNGALNENTMAPLLQWLIKSGKPQLALEIARIFLNWYNVKGVYQAYSQMQKVS
>Mature_313_residues
MFISVVIPTYDRQPILEKCLRALEAQQLSASTVINEYEIVLVDDGSTDGTLDWLATHKEEFPHVRWFEQDHAGPAAARNL
GVEKARGDIIIFIDSDLVVLDNFLQAHADALLQGQEKLGSDRFFTYGAVINTCNFDNPTAEPYKITDFSAAFFATGNVAI
PKHWLEQAGLFDTGFQLYGWEDLELGVRLKNLGLQLIKCPAAVGYHWHPPFNLEQVPNLIEKEIQRGRMGVLFYKKHPTW
EVRMMIQMTWLHRLLWGILSLNGALNENTMAPLLQWLIKSGKPQLALEIARIFLNWYNVKGVYQAYSQMQKVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=94, Percent_Identity=36.1702127659575, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35664; Mature: 35664

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISVVIPTYDRQPILEKCLRALEAQQLSASTVINEYEIVLVDDGSTDGTLDWLATHKEE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCCCHHHHHHHHHH
FPHVRWFEQDHAGPAAARNLGVEKARGDIIIFIDSDLVVLDNFLQAHADALLQGQEKLGS
CCCCEEECCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCHHHCCC
DRFFTYGAVINTCNFDNPTAEPYKITDFSAAFFATGNVAIPKHWLEQAGLFDTGFQLYGW
CCEEEECCEEEECCCCCCCCCCEEEECCCEEEEECCCEECCHHHHHHCCCCCCCCEEECC
EDLELGVRLKNLGLQLIKCPAAVGYHWHPPFNLEQVPNLIEKEIQRGRMGVLFYKKHPTW
CCHHHCEEEHHCCEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCE
EVRMMIQMTWLHRLLWGILSLNGALNENTMAPLLQWLIKSGKPQLALEIARIFLNWYNVK
EEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GVYQAYSQMQKVS
HHHHHHHHHHHCC
>Mature Secondary Structure
MFISVVIPTYDRQPILEKCLRALEAQQLSASTVINEYEIVLVDDGSTDGTLDWLATHKEE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCCCHHHHHHHHHH
FPHVRWFEQDHAGPAAARNLGVEKARGDIIIFIDSDLVVLDNFLQAHADALLQGQEKLGS
CCCCEEECCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCHHHCCC
DRFFTYGAVINTCNFDNPTAEPYKITDFSAAFFATGNVAIPKHWLEQAGLFDTGFQLYGW
CCEEEECCEEEECCCCCCCCCCEEEECCCEEEEECCCEECCHHHHHHCCCCCCCCEEECC
EDLELGVRLKNLGLQLIKCPAAVGYHWHPPFNLEQVPNLIEKEIQRGRMGVLFYKKHPTW
CCHHHCEEEHHCCEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCE
EVRMMIQMTWLHRLLWGILSLNGALNENTMAPLLQWLIKSGKPQLALEIARIFLNWYNVK
EEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GVYQAYSQMQKVS
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]