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The map label for this gene is 17232271

Identifier: 17232271

GI number: 17232271

Start: 5694331

End: 5694879

Strand: Reverse

Name: 17232271

Synonym: all4779

Alternate gene names: NA

Gene position: 5694879-5694331 (Counterclockwise)

Preceding gene: 17232272

Following gene: 17232270

Centisome position: 88.79

GC content: 45.54

Gene sequence:

>549_bases
ATGAACAGCTGTGTTTTATTAGCAGAAATCATTCAAGAGCCACAACTGCGCTATACATCTGATAATTTAGCAGTCACAGA
AATGTTGGTGCAATTTCCCAATTCCCAAAAACCAGATGATCCACCAGCGACTTTAAAAGTTGTTGGCTGGGGGAATTTAG
CTACAGAAATCCAGCAAAACTATCATCAAGGCGATCGCGTCATCATTGCTGGACGTTTAGGGATGAATACCATCGACCGT
CCAGAAGGATTTAAAGAAAAACGGGCTGAATTAACAGTACAGCAGATTCAATCAATTAGTGGTAGTGGTAACTTCACCTC
ATCACCAGCAGTATCCAGAACACCAGCCGTTACCGAAACCCCCTCTCGTCCACCCTCCCCGGCTGTTACGACTCAACATG
ATCTTCCTAGCTACGAATCACCACGTCCAGCACCAACTCCAGCACCCAGTAAAGTGAGTGTTCCACCCCAGGTAAACAAC
TATGAACCTGCGCCTCAAACTACCTACTCACCTGTAGAAGTACCAGACCCAGACGATATTCCATTTTAG

Upstream 100 bases:

>100_bases
TTCAATGGTTGGAAGAAAGTTAAGTAAGGGAAAATCTCACAATCAAAAACAGAAATCTTTCTTCCCTAATCCCTATTTTC
CATACAGTCAGGAGGATTTA

Downstream 100 bases:

>100_bases
GTAATGGGTGTAAGGGTGTGAGGGTTTCAAAGATTTATACCCCTATACCCCTACATCCTTGATCTTTCGTTTTCATGTGT
AAGTCCTAATTCTTTCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Thylakoid-associated SSB [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNSCVLLAEIIQEPQLRYTSDNLAVTEMLVQFPNSQKPDDPPATLKVVGWGNLATEIQQNYHQGDRVIIAGRLGMNTIDR
PEGFKEKRAELTVQQIQSISGSGNFTSSPAVSRTPAVTETPSRPPSPAVTTQHDLPSYESPRPAPTPAPSKVSVPPQVNN
YEPAPQTTYSPVEVPDPDDIPF

Sequences:

>Translated_182_residues
MNSCVLLAEIIQEPQLRYTSDNLAVTEMLVQFPNSQKPDDPPATLKVVGWGNLATEIQQNYHQGDRVIIAGRLGMNTIDR
PEGFKEKRAELTVQQIQSISGSGNFTSSPAVSRTPAVTETPSRPPSPAVTTQHDLPSYESPRPAPTPAPSKVSVPPQVNN
YEPAPQTTYSPVEVPDPDDIPF
>Mature_182_residues
MNSCVLLAEIIQEPQLRYTSDNLAVTEMLVQFPNSQKPDDPPATLKVVGWGNLATEIQQNYHQGDRVIIAGRLGMNTIDR
PEGFKEKRAELTVQQIQSISGSGNFTSSPAVSRTPAVTETPSRPPSPAVTTQHDLPSYESPRPAPTPAPSKVSVPPQVNN
YEPAPQTTYSPVEVPDPDDIPF

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19800; Mature: 19800

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSCVLLAEIIQEPQLRYTSDNLAVTEMLVQFPNSQKPDDPPATLKVVGWGNLATEIQQN
CCCHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHH
YHQGDRVIIAGRLGMNTIDRPEGFKEKRAELTVQQIQSISGSGNFTSSPAVSRTPAVTET
HCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PSRPPSPAVTTQHDLPSYESPRPAPTPAPSKVSVPPQVNNYEPAPQTTYSPVEVPDPDDI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PF
CC
>Mature Secondary Structure
MNSCVLLAEIIQEPQLRYTSDNLAVTEMLVQFPNSQKPDDPPATLKVVGWGNLATEIQQN
CCCHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHH
YHQGDRVIIAGRLGMNTIDRPEGFKEKRAELTVQQIQSISGSGNFTSSPAVSRTPAVTET
HCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PSRPPSPAVTTQHDLPSYESPRPAPTPAPSKVSVPPQVNNYEPAPQTTYSPVEVPDPDDI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]