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The map label for this gene is 17232236

Identifier: 17232236

GI number: 17232236

Start: 5656758

End: 5658599

Strand: Reverse

Name: 17232236

Synonym: all4744

Alternate gene names: NA

Gene position: 5658599-5656758 (Counterclockwise)

Preceding gene: 17232240

Following gene: 17232235

Centisome position: 88.23

GC content: 43.21

Gene sequence:

>1842_bases
ATGAGCGGAAAGCCTAAGCTTGATCTAATATTTATCTACGCACAGGTTTTTGCAGGCGATCGCTCGATGTCTCTACCCCA
AATCAGTGAATTTACAGTCCGTCGCTACGCTAACGCCAAATCTTTCCAACGTGGGGAGGCTTATTTTGAAGCGGGTGCTG
TCACCACAATTACTCAGCGTGGTCAGCAATTGCAGGCAGAAGTAGAAGGCAATGAACGATTACCTTATCGTGTATCTCTA
AATTTTGATGACAAGAATATCACTTCGGCCAAGTGTACTTGTGCTTACAATTTGGATGGTTGGTGTAAACACATTGTGGC
GACGATGCTTGTATCTACAAGACAGCCAGAAATTATTGAGCAGCGTCCTACGTTAGAACAATTACTAGATCGTCTAGATC
ATGTCCAGACTCAAAGGCTTGTACAGGAATTAGTTGCCGAACAACCCCAACTAATAGATGTGATTGATCAGCACGTTAGT
TGGATGAATAGTCCTGTAGCTAAACCTATATCTACTCAACCAGGACGAGAAATAAGTGTAAATTTGGCAGCCTTTCGCGG
ACAAGTCAAGCAGATTTTGCGGGAAGCAGTCCGCTACTTTGAAGAAGGGTATGAGGAAGACCCGATTACCGAAGATTTGT
TTAGTTTGGTGCAGACTGCTTTAGAATTTTCTCAGCAAGGTGAGAGTAATAATGCGATCGCTATTCTTGAAGCCATTACA
TCTACCTGTGCGGAAAATTGGGATGAGGTGTCAGAATACGGGGCTGACAATGATGAAATTGCCTGGGAATTAAATCTGGC
TTGGTGTGAAGTGATTCTCTCGTCCGAACTGACATCAGCAGAAAAAGTTGATGTGCAAGTGAGTTTGGAAGCTTGGCAAG
ATGAATGGAATGCCGATTTCAGCATGAGTTTAGATGCGTTGCGCCAAGGTTGGGATGATTCACATTTGCTGCGAGTTCTC
CAAGGCGATATCGCCGAAATGGGTGTATGGGAACGGGAAGTTCCTAATTACGCTGATGATTTGGCACAAATTCGCCTCAA
AATTCTCGAACGTCAGGAACGCTACCAAGAATATTTGTATTTAGCCCAAGTAGAGGGACAAACCCAAGAATATTTAACGA
TGTTGGGGCGTTTAGGCAGGGTAGAGGAAGCATTAGCGGCGGCGGAAATGCAGATGAGTTCCACGGAAGAGGCTTTTGCT
TTAGCTAAAACCTTAGCTGAACAAGGTTCATTACCGGAAGCATTAGACATAGCCCAAGTTGGTTTTAAGTTACCTGGTAA
TTGTCGGTATGAATTAGGTATTTGGACAAGCGATTTAGCCGAAGCTGTGGGCAATCCAGAGATTTCTTTACTCGCACTCA
AGGAAGCTTTTCAAGTTAAACCCTGCTTTGTTGATTATCAAAAAATGGCAGAATTAGCGGGTGAAAGCTGGGAAAATGTC
AAAACAGATTTATTAAGGATTATTCAGAGTTGTAAGACTTGGGGAATAGAATCAGCCAAGGTGGATGTATTTTTATATGA
AGGACTGATTGAGGATGCGATCGCTACTGTCAGTGAACTCAGTTCCTATCATTCAGCTTTAATCCACCGAGTCATGGAAG
CGGCTATATCACATAAGCCTGATTGGGTGATAACTAATGCCCGTCGCCGTGCTGAAAAAATTATGGATGAGGGTAAGGCA
GAATACTATAGCGAAGCAGTGGAGTGGCTAAAAAAAGTACGTGCTGCTTATATACAATCTGGTAGACAAGCAGATTGGTC
AAAATATCGAGAAAAGTTAATAGAAATCCACGCCCGTAAACGGAAATTGATGGGAATGTTCAAGGAACGGGGGATGGAAT
GA

Upstream 100 bases:

>100_bases
CATCTATTGATGTCCTAACACTACTGGCGACGGCTATAATTTTGAATTTTGAATTTTGAATTGGAGCAAAGTGACTTGAC
CAATCTCCTAATTGCAATCA

Downstream 100 bases:

>100_bases
GAAAGCAGGGAAGTATAGCATCACGGAAGGGGGAATCATCGCCGTCACTTATAGCACAAACAGCGACTCATTAGACTATG
TGATTAAAAAGATACATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: SWIM Zinc Finger Domain-Containing Protein; Zinc Finger SWIM Domain Protein

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MSGKPKLDLIFIYAQVFAGDRSMSLPQISEFTVRRYANAKSFQRGEAYFEAGAVTTITQRGQQLQAEVEGNERLPYRVSL
NFDDKNITSAKCTCAYNLDGWCKHIVATMLVSTRQPEIIEQRPTLEQLLDRLDHVQTQRLVQELVAEQPQLIDVIDQHVS
WMNSPVAKPISTQPGREISVNLAAFRGQVKQILREAVRYFEEGYEEDPITEDLFSLVQTALEFSQQGESNNAIAILEAIT
STCAENWDEVSEYGADNDEIAWELNLAWCEVILSSELTSAEKVDVQVSLEAWQDEWNADFSMSLDALRQGWDDSHLLRVL
QGDIAEMGVWEREVPNYADDLAQIRLKILERQERYQEYLYLAQVEGQTQEYLTMLGRLGRVEEALAAAEMQMSSTEEAFA
LAKTLAEQGSLPEALDIAQVGFKLPGNCRYELGIWTSDLAEAVGNPEISLLALKEAFQVKPCFVDYQKMAELAGESWENV
KTDLLRIIQSCKTWGIESAKVDVFLYEGLIEDAIATVSELSSYHSALIHRVMEAAISHKPDWVITNARRRAEKIMDEGKA
EYYSEAVEWLKKVRAAYIQSGRQADWSKYREKLIEIHARKRKLMGMFKERGME

Sequences:

>Translated_613_residues
MSGKPKLDLIFIYAQVFAGDRSMSLPQISEFTVRRYANAKSFQRGEAYFEAGAVTTITQRGQQLQAEVEGNERLPYRVSL
NFDDKNITSAKCTCAYNLDGWCKHIVATMLVSTRQPEIIEQRPTLEQLLDRLDHVQTQRLVQELVAEQPQLIDVIDQHVS
WMNSPVAKPISTQPGREISVNLAAFRGQVKQILREAVRYFEEGYEEDPITEDLFSLVQTALEFSQQGESNNAIAILEAIT
STCAENWDEVSEYGADNDEIAWELNLAWCEVILSSELTSAEKVDVQVSLEAWQDEWNADFSMSLDALRQGWDDSHLLRVL
QGDIAEMGVWEREVPNYADDLAQIRLKILERQERYQEYLYLAQVEGQTQEYLTMLGRLGRVEEALAAAEMQMSSTEEAFA
LAKTLAEQGSLPEALDIAQVGFKLPGNCRYELGIWTSDLAEAVGNPEISLLALKEAFQVKPCFVDYQKMAELAGESWENV
KTDLLRIIQSCKTWGIESAKVDVFLYEGLIEDAIATVSELSSYHSALIHRVMEAAISHKPDWVITNARRRAEKIMDEGKA
EYYSEAVEWLKKVRAAYIQSGRQADWSKYREKLIEIHARKRKLMGMFKERGME
>Mature_612_residues
SGKPKLDLIFIYAQVFAGDRSMSLPQISEFTVRRYANAKSFQRGEAYFEAGAVTTITQRGQQLQAEVEGNERLPYRVSLN
FDDKNITSAKCTCAYNLDGWCKHIVATMLVSTRQPEIIEQRPTLEQLLDRLDHVQTQRLVQELVAEQPQLIDVIDQHVSW
MNSPVAKPISTQPGREISVNLAAFRGQVKQILREAVRYFEEGYEEDPITEDLFSLVQTALEFSQQGESNNAIAILEAITS
TCAENWDEVSEYGADNDEIAWELNLAWCEVILSSELTSAEKVDVQVSLEAWQDEWNADFSMSLDALRQGWDDSHLLRVLQ
GDIAEMGVWEREVPNYADDLAQIRLKILERQERYQEYLYLAQVEGQTQEYLTMLGRLGRVEEALAAAEMQMSSTEEAFAL
AKTLAEQGSLPEALDIAQVGFKLPGNCRYELGIWTSDLAEAVGNPEISLLALKEAFQVKPCFVDYQKMAELAGESWENVK
TDLLRIIQSCKTWGIESAKVDVFLYEGLIEDAIATVSELSSYHSALIHRVMEAAISHKPDWVITNARRRAEKIMDEGKAE
YYSEAVEWLKKVRAAYIQSGRQADWSKYREKLIEIHARKRKLMGMFKERGME

Specific function: Unknown

COG id: COG4715

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69725; Mature: 69593

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKPKLDLIFIYAQVFAGDRSMSLPQISEFTVRRYANAKSFQRGEAYFEAGAVTTITQR
CCCCCCEEHEEHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHC
GQQLQAEVEGNERLPYRVSLNFDDKNITSAKCTCAYNLDGWCKHIVATMLVSTRQPEIIE
CHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHH
QRPTLEQLLDRLDHVQTQRLVQELVAEQPQLIDVIDQHVSWMNSPVAKPISTQPGREISV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
NLAAFRGQVKQILREAVRYFEEGYEEDPITEDLFSLVQTALEFSQQGESNNAIAILEAIT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
STCAENWDEVSEYGADNDEIAWELNLAWCEVILSSELTSAEKVDVQVSLEAWQDEWNADF
HHHHHCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHEEEEEEHHHHHHHHCCCH
SMSLDALRQGWDDSHLLRVLQGDIAEMGVWEREVPNYADDLAQIRLKILERQERYQEYLY
HEEHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAQVEGQTQEYLTMLGRLGRVEEALAAAEMQMSSTEEAFALAKTLAEQGSLPEALDIAQV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHH
GFKLPGNCRYELGIWTSDLAEAVGNPEISLLALKEAFQVKPCFVDYQKMAELAGESWENV
CCCCCCCCEEEECCCHHHHHHHHCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHCCCHHHH
KTDLLRIIQSCKTWGIESAKVDVFLYEGLIEDAIATVSELSSYHSALIHRVMEAAISHKP
HHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DWVITNARRRAEKIMDEGKAEYYSEAVEWLKKVRAAYIQSGRQADWSKYREKLIEIHARK
CEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RKLMGMFKERGME
HHHHHHHHHCCCC
>Mature Secondary Structure 
SGKPKLDLIFIYAQVFAGDRSMSLPQISEFTVRRYANAKSFQRGEAYFEAGAVTTITQR
CCCCCEEHEEHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHC
GQQLQAEVEGNERLPYRVSLNFDDKNITSAKCTCAYNLDGWCKHIVATMLVSTRQPEIIE
CHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHH
QRPTLEQLLDRLDHVQTQRLVQELVAEQPQLIDVIDQHVSWMNSPVAKPISTQPGREISV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
NLAAFRGQVKQILREAVRYFEEGYEEDPITEDLFSLVQTALEFSQQGESNNAIAILEAIT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
STCAENWDEVSEYGADNDEIAWELNLAWCEVILSSELTSAEKVDVQVSLEAWQDEWNADF
HHHHHCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHEEEEEEHHHHHHHHCCCH
SMSLDALRQGWDDSHLLRVLQGDIAEMGVWEREVPNYADDLAQIRLKILERQERYQEYLY
HEEHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAQVEGQTQEYLTMLGRLGRVEEALAAAEMQMSSTEEAFALAKTLAEQGSLPEALDIAQV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHH
GFKLPGNCRYELGIWTSDLAEAVGNPEISLLALKEAFQVKPCFVDYQKMAELAGESWENV
CCCCCCCCEEEECCCHHHHHHHHCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHCCCHHHH
KTDLLRIIQSCKTWGIESAKVDVFLYEGLIEDAIATVSELSSYHSALIHRVMEAAISHKP
HHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DWVITNARRRAEKIMDEGKAEYYSEAVEWLKKVRAAYIQSGRQADWSKYREKLIEIHARK
CEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RKLMGMFKERGME
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA