| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232235
Identifier: 17232235
GI number: 17232235
Start: 5656392
End: 5656583
Strand: Reverse
Name: 17232235
Synonym: asl4743
Alternate gene names: NA
Gene position: 5656583-5656392 (Counterclockwise)
Preceding gene: 17232236
Following gene: 17232229
Centisome position: 88.19
GC content: 40.1
Gene sequence:
>192_bases ATGGCTACTGCTACATCTACTGTTTCTGAATGTGAATGCCAAGCTGCTTGGACACGTCATTTAAATAAGTCTTACTACCA AGACGACCAGCAAGTTAAACTGATGAACTTACAAGCAGAGGTGGACTCTCTGCTGGAACAATTACAAAATCTCAAAGAAC AACGTTTAGCAGCTACTACCAAAGAAGATTGA
Upstream 100 bases:
>100_bases ACTATGTGATTAAAAAGATACATTTATTTAACAAAGCTTAAAGTTGCTTTATTATATTATTTACCAAGAGGTGTGAGTTG AGTTTTGGAATTTAAAAAAG
Downstream 100 bases:
>100_bases CACTCCCCTGACTATTTTATGGAGTGTCTTTATCATCTGTTTTTGGGAACGCGCAACTTTAAATCATGAATCTTCACTTT CAAGTTTAGCGATCGCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MATATSTVSECECQAAWTRHLNKSYYQDDQQVKLMNLQAEVDSLLEQLQNLKEQRLAATTKED
Sequences:
>Translated_63_residues MATATSTVSECECQAAWTRHLNKSYYQDDQQVKLMNLQAEVDSLLEQLQNLKEQRLAATTKED >Mature_62_residues ATATSTVSECECQAAWTRHLNKSYYQDDQQVKLMNLQAEVDSLLEQLQNLKEQRLAATTKED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7219; Mature: 7088
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATATSTVSECECQAAWTRHLNKSYYQDDQQVKLMNLQAEVDSLLEQLQNLKEQRLAATT CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KED CCC >Mature Secondary Structure ATATSTVSECECQAAWTRHLNKSYYQDDQQVKLMNLQAEVDSLLEQLQNLKEQRLAATT CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KED CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA