| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232216
Identifier: 17232216
GI number: 17232216
Start: 5631210
End: 5632442
Strand: Reverse
Name: 17232216
Synonym: all4724
Alternate gene names: NA
Gene position: 5632442-5631210 (Counterclockwise)
Preceding gene: 17232217
Following gene: 17232215
Centisome position: 87.82
GC content: 45.66
Gene sequence:
>1233_bases ATGACCAAAAAAACCGACTTAGCTATTGTTGGCGCAGGGCCTCATGCTCTAACTTTGACTACCCATCTACTGCAAAAACG GCAGTCTCTGAGGGGGAAATTTCTGGTATTTGACCCCAGTGGTAGATGGATGAGTGGCTGGAATCAGCAATTTGCAGCTT TGGAAATTCCCCATTTGCGATCGCCCGCAGTTCATCATCCAGACCCCAACCCCTTTGCTTTACGGAAATTCGCTGAATCT CGTCCTCATGAGTTATTTCCCCCCTATGATTTACCAGGGACACAATTATTCGAGGATTTTTGCCAAGATGTGGTTCGAGT TTGGCAGTTACAAGAGCGAGTCATTCCTTTAGCCGTTACCAAAATTGAACCCATTCCTCATCATCTGCGTCCCCAATTTT GCCTTAGTTTACAAGATGGGCAGAAGGTAACAGCAAGACGGGTAGTGTTGGCTACTGGTAGCGCTCAACGTCAAATCCCG ACTTGGGTAAACGAGATTCAGACACCATACCCACAAGAGAGAATTTGCCACTCACAAACCATTGATTTACGAAAATTGTC GTTAATGGGGAAGAGAATTTTGATTGTGGGTGGTGGGTTAACTAGCGGACATTTGGCTGTGGGTGCGATTTCTCACGGTG CGAAGGTTCAGTTAATGATGCGGCGACAGTTAACAGAAAAGTTATTCGATGCAGAACCAGGATGGTTGGGGCCAAAGTAT CTCAAAGACTTTTTTGCTCAATCTGATTGGGAACAACGCTGGACGACGATTCAGCAAGCTAGAAATGGTGGTTCCATGAC TCCGGCGATCGCTACCCAAATAAGACGACAAGTCCGTAGTGGTAACATCAAAATTGACGAAAACTGTCAAATACTCAAAG CCCAATGGCTCGGCAAAAATTGGCAAGTCGAATGTAGTGATGGTAGTCACCATGAATGCGATTATATTTGGCTTTCCACA GGTACTAAATTCGATGTCACCCATGAACCCTTATTAAAAGATGTTCTCGTCGCTTACCCTATTCCCATAGTTAAAGGTTT ACCAGTTTTAGATACTTGTCTACGTTGGCCTGGCTGCGAATTATTTATCATGGGCGGTTTGGCAGCTTTACAAGTAGGGC CAACAGCACGCAACTTATCAGGCGCAAGAATGGCCTGTGAAAAAATCGTCCCTGCCATAGCTAAACCAAGCATAGCTTTT TCCCCCAGCATCACCGGAGTACAAGCCAGCTGA
Upstream 100 bases:
>100_bases TCACCTACTTTGCCAAAGAAGTAGCACTGATGTTGCTTTAGACGTGGAGGGCAGAGGGGCAAGGGGGGCAAATAACAACT GACAACTGACAACTAACAAA
Downstream 100 bases:
>100_bases AAGTTGAGGGGGTGTAGGGGTCAAAGAAATCATAACTTTGACGTTTTTATAGTCATTCCCAATCCGCCCCTTTTTGCGCT AACATGATAACGATTCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTKKTDLAIVGAGPHALTLTTHLLQKRQSLRGKFLVFDPSGRWMSGWNQQFAALEIPHLRSPAVHHPDPNPFALRKFAES RPHELFPPYDLPGTQLFEDFCQDVVRVWQLQERVIPLAVTKIEPIPHHLRPQFCLSLQDGQKVTARRVVLATGSAQRQIP TWVNEIQTPYPQERICHSQTIDLRKLSLMGKRILIVGGGLTSGHLAVGAISHGAKVQLMMRRQLTEKLFDAEPGWLGPKY LKDFFAQSDWEQRWTTIQQARNGGSMTPAIATQIRRQVRSGNIKIDENCQILKAQWLGKNWQVECSDGSHHECDYIWLST GTKFDVTHEPLLKDVLVAYPIPIVKGLPVLDTCLRWPGCELFIMGGLAALQVGPTARNLSGARMACEKIVPAIAKPSIAF SPSITGVQAS
Sequences:
>Translated_410_residues MTKKTDLAIVGAGPHALTLTTHLLQKRQSLRGKFLVFDPSGRWMSGWNQQFAALEIPHLRSPAVHHPDPNPFALRKFAES RPHELFPPYDLPGTQLFEDFCQDVVRVWQLQERVIPLAVTKIEPIPHHLRPQFCLSLQDGQKVTARRVVLATGSAQRQIP TWVNEIQTPYPQERICHSQTIDLRKLSLMGKRILIVGGGLTSGHLAVGAISHGAKVQLMMRRQLTEKLFDAEPGWLGPKY LKDFFAQSDWEQRWTTIQQARNGGSMTPAIATQIRRQVRSGNIKIDENCQILKAQWLGKNWQVECSDGSHHECDYIWLST GTKFDVTHEPLLKDVLVAYPIPIVKGLPVLDTCLRWPGCELFIMGGLAALQVGPTARNLSGARMACEKIVPAIAKPSIAF SPSITGVQAS >Mature_409_residues TKKTDLAIVGAGPHALTLTTHLLQKRQSLRGKFLVFDPSGRWMSGWNQQFAALEIPHLRSPAVHHPDPNPFALRKFAESR PHELFPPYDLPGTQLFEDFCQDVVRVWQLQERVIPLAVTKIEPIPHHLRPQFCLSLQDGQKVTARRVVLATGSAQRQIPT WVNEIQTPYPQERICHSQTIDLRKLSLMGKRILIVGGGLTSGHLAVGAISHGAKVQLMMRRQLTEKLFDAEPGWLGPKYL KDFFAQSDWEQRWTTIQQARNGGSMTPAIATQIRRQVRSGNIKIDENCQILKAQWLGKNWQVECSDGSHHECDYIWLSTG TKFDVTHEPLLKDVLVAYPIPIVKGLPVLDTCLRWPGCELFIMGGLAALQVGPTARNLSGARMACEKIVPAIAKPSIAFS PSITGVQAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45822; Mature: 45691
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKTDLAIVGAGPHALTLTTHLLQKRQSLRGKFLVFDPSGRWMSGWNQQFAALEIPHLR CCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCCC SPAVHHPDPNPFALRKFAESRPHELFPPYDLPGTQLFEDFCQDVVRVWQLQERVIPLAVT CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEE KIEPIPHHLRPQFCLSLQDGQKVTARRVVLATGSAQRQIPTWVNEIQTPYPQERICHSQT ECCCCCCCCCHHEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHCCCC IDLRKLSLMGKRILIVGGGLTSGHLAVGAISHGAKVQLMMRRQLTEKLFDAEPGWLGPKY CCHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCHHH LKDFFAQSDWEQRWTTIQQARNGGSMTPAIATQIRRQVRSGNIKIDENCQILKAQWLGKN HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEHHHCCCC WQVECSDGSHHECDYIWLSTGTKFDVTHEPLLKDVLVAYPIPIVKGLPVLDTCLRWPGCE CEEEECCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHCCHHHHCCCCHHHHHHCCCCCE LFIMGGLAALQVGPTARNLSGARMACEKIVPAIAKPSIAFSPSITGVQAS EEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCC >Mature Secondary Structure TKKTDLAIVGAGPHALTLTTHLLQKRQSLRGKFLVFDPSGRWMSGWNQQFAALEIPHLR CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCCC SPAVHHPDPNPFALRKFAESRPHELFPPYDLPGTQLFEDFCQDVVRVWQLQERVIPLAVT CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEE KIEPIPHHLRPQFCLSLQDGQKVTARRVVLATGSAQRQIPTWVNEIQTPYPQERICHSQT ECCCCCCCCCHHEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHCCCC IDLRKLSLMGKRILIVGGGLTSGHLAVGAISHGAKVQLMMRRQLTEKLFDAEPGWLGPKY CCHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCHHH LKDFFAQSDWEQRWTTIQQARNGGSMTPAIATQIRRQVRSGNIKIDENCQILKAQWLGKN HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEHHHCCCC WQVECSDGSHHECDYIWLSTGTKFDVTHEPLLKDVLVAYPIPIVKGLPVLDTCLRWPGCE CEEEECCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHCCHHHHCCCCHHHHHHCCCCCE LFIMGGLAALQVGPTARNLSGARMACEKIVPAIAKPSIAFSPSITGVQAS EEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA