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The map label for this gene is xylB [H]

Identifier: 17232148

GI number: 17232148

Start: 5557488

End: 5558738

Strand: Reverse

Name: xylB [H]

Synonym: all4656

Alternate gene names: 17232148

Gene position: 5558738-5557488 (Counterclockwise)

Preceding gene: 17232151

Following gene: 17232146

Centisome position: 86.67

GC content: 45.48

Gene sequence:

>1251_bases
ATGGATTTTTATTTGGGGATAGACTTTGGTACGTCTGGTGCTAGGGCTGTGGTAATTGATGAATCAGCCCATATCCAGGT
GCAGGTGCGTTATCCTTGGCTAGAGGTAGATTCCTTAGTATCTAGCTGGCAAAAGGCTTTGTTGACGCTGCTAGGACAAA
TTCCTGAACAGTTGCGGCGAGAAATCAGAGCGATCGCTATCAACGGAACTTCCTCTACAGTCTTATTATGCGATGTAAAT
GGCAACCCTGTAGATACTCCTTTACTTTACAACGATGGGCGGGGATCACTGGTGTTGGAAGAGTTGAGAGATATCGCACC
AGCAAATCATACTGTTTTAAGTGCTACTTCCAGCTTGGCTAAATTGCGCTGGATGATGCAGTTACCCTCTTTTGGTGAAG
CGCGATATTTTCTGCACCAAGCCGACTGGTTAGGGTTTCTCCTGCATGGACAATTGGGAATCAGCGACTACCATAATGCT
TTAAAGCTGGGGTATGACGTGGAAAAGTTGAAGTACCCAGAATGGTTAGAAAGTTTGCAAACACCAATTCAGCTACCCAA
AGTTTTACCGCCTGGGACTCCCATTGGTGAAGTGCGTCCCGAAATTTCCCAACAGTTTTTATTCCCTGATGATTGCGTGG
TATGTGCGGGGACAACAGATAGCATTGCGGCATTTTTGGCGAGTGGTGCAAAATCACCAGGGGAAGCGGTGACTTCCCTG
GGTTCAACATTAGTACTCAAACTTTTAAGTCATACCCGCGTAGAAGATGCACGATATGGAATTTATAGCCATCGCCTTGG
AGATTTGTGGCTAACTGGTGGCGCGTCGAATACGGGGGGTGCAGTTTTACGCGAATTTTTTACTGATGCTGAGTTAGAAA
ACTTGAGTCGTGAAATTAATGCCACAAAAGCCAGCCAATTAGATTATTATCCCTTGTTGAAAGTAGGGGAACGTTTCCCC
ATCAATGATTCCAATTTACCCCCACGCCTCACACCACGCCCAGACAATCCAGCCGAATTTTTACATGGCTTATTAGAAAG
TATCGCCCGCATAGAAGCCCAAGGATATGAACTATTACAAAAATTGGGTGCAGATAGCTTAAATCAAGTTTATACAGCCG
GTGGCGGCGCAAAAAACCCCACCTGGGCTGCAATTCGGCAAAGAAATTTAAAAGTCCCCGTCATTTCCTCACTTAATACA
GAAGCCGCCTATGGAACAGCATTGCTGGCGATGCAGAGAATAAGAGAATAA

Upstream 100 bases:

>100_bases
TGTTTTGCTGGAAATATGGAATATCTTGTTACAAGATGCAACAAAAGCACTTGTTAGTCAGTAGTCTTAGTTATCTTTCA
TTAAAAAAATTTATAAAAAT

Downstream 100 bases:

>100_bases
ATCTCCCTTCTCTCTGCACCTCTGCGTACACAAATCACGCCAACGTTCCCTTCCCAAATATTCAGTATGATTTGTTCATA
AATATCGTTTAAATCCGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRREIRAIAINGTSSTVLLCDVN
GNPVDTPLLYNDGRGSLVLEELRDIAPANHTVLSATSSLAKLRWMMQLPSFGEARYFLHQADWLGFLLHGQLGISDYHNA
LKLGYDVEKLKYPEWLESLQTPIQLPKVLPPGTPIGEVRPEISQQFLFPDDCVVCAGTTDSIAAFLASGAKSPGEAVTSL
GSTLVLKLLSHTRVEDARYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREINATKASQLDYYPLLKVGERFP
INDSNLPPRLTPRPDNPAEFLHGLLESIARIEAQGYELLQKLGADSLNQVYTAGGGAKNPTWAAIRQRNLKVPVISSLNT
EAAYGTALLAMQRIRE

Sequences:

>Translated_416_residues
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRREIRAIAINGTSSTVLLCDVN
GNPVDTPLLYNDGRGSLVLEELRDIAPANHTVLSATSSLAKLRWMMQLPSFGEARYFLHQADWLGFLLHGQLGISDYHNA
LKLGYDVEKLKYPEWLESLQTPIQLPKVLPPGTPIGEVRPEISQQFLFPDDCVVCAGTTDSIAAFLASGAKSPGEAVTSL
GSTLVLKLLSHTRVEDARYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREINATKASQLDYYPLLKVGERFP
INDSNLPPRLTPRPDNPAEFLHGLLESIARIEAQGYELLQKLGADSLNQVYTAGGGAKNPTWAAIRQRNLKVPVISSLNT
EAAYGTALLAMQRIRE
>Mature_416_residues
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRREIRAIAINGTSSTVLLCDVN
GNPVDTPLLYNDGRGSLVLEELRDIAPANHTVLSATSSLAKLRWMMQLPSFGEARYFLHQADWLGFLLHGQLGISDYHNA
LKLGYDVEKLKYPEWLESLQTPIQLPKVLPPGTPIGEVRPEISQQFLFPDDCVVCAGTTDSIAAFLASGAKSPGEAVTSL
GSTLVLKLLSHTRVEDARYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREINATKASQLDYYPLLKVGERFP
INDSNLPPRLTPRPDNPAEFLHGLLESIARIEAQGYELLQKLGADSLNQVYTAGGGAKNPTWAAIRQRNLKVPVISSLNT
EAAYGTALLAMQRIRE

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 45666; Mature: 45666

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRR
CCEEEEEEECCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIRAIAINGTSSTVLLCDVNGNPVDTPLLYNDGRGSLVLEELRDIAPANHTVLSATSSLA
HHHEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHH
KLRWMMQLPSFGEARYFLHQADWLGFLLHGQLGISDYHNALKLGYDVEKLKYPEWLESLQ
HHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCHHHCCCHHHHHHHC
TPIQLPKVLPPGTPIGEVRPEISQQFLFPDDCVVCAGTTDSIAAFLASGAKSPGEAVTSL
CCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHH
GSTLVLKLLSHTRVEDARYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREIN
HHHHHHHHHHHCCHHHHHHCHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
ATKASQLDYYPLLKVGERFPINDSNLPPRLTPRPDNPAEFLHGLLESIARIEAQGYELLQ
CHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLGADSLNQVYTAGGGAKNPTWAAIRQRNLKVPVISSLNTEAAYGTALLAMQRIRE
HHCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFYLGIDFGTSGARAVVIDESAHIQVQVRYPWLEVDSLVSSWQKALLTLLGQIPEQLRR
CCEEEEEEECCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIRAIAINGTSSTVLLCDVNGNPVDTPLLYNDGRGSLVLEELRDIAPANHTVLSATSSLA
HHHEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHH
KLRWMMQLPSFGEARYFLHQADWLGFLLHGQLGISDYHNALKLGYDVEKLKYPEWLESLQ
HHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCHHHCCCHHHHHHHC
TPIQLPKVLPPGTPIGEVRPEISQQFLFPDDCVVCAGTTDSIAAFLASGAKSPGEAVTSL
CCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHH
GSTLVLKLLSHTRVEDARYGIYSHRLGDLWLTGGASNTGGAVLREFFTDAELENLSREIN
HHHHHHHHHHHCCHHHHHHCHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
ATKASQLDYYPLLKVGERFPINDSNLPPRLTPRPDNPAEFLHGLLESIARIEAQGYELLQ
CHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KLGADSLNQVYTAGGGAKNPTWAAIRQRNLKVPVISSLNTEAAYGTALLAMQRIRE
HHCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 2994009 [H]