| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232107
Identifier: 17232107
GI number: 17232107
Start: 5517663
End: 5518235
Strand: Reverse
Name: 17232107
Synonym: all4615
Alternate gene names: NA
Gene position: 5518235-5517663 (Counterclockwise)
Preceding gene: 17232109
Following gene: 17232106
Centisome position: 86.04
GC content: 42.76
Gene sequence:
>573_bases ATGAGCATTATTATTTGCCCTGGAATCCATGACTCAGATTTAACTGAAAGCTTTGTGTCAGGGTGCTTGGGTGCATTCTC TGGTAACTCAATTAGTCAAAAGCCCGTAGAGATACTTGTTGTTCCAGTGGCAGGGGTTTTGACTTTATCATCACTTCATA TTTTGCAGTTTCTGCACGATCGCTTGGGGAATAAGCTAAAATCGCCAGTTATATTCATCAGCTTCAGTGCTGGCGTAGTC GGAGCGATCGCTGCTGCTTGGCAATGGCAAAATTGGGGGGGTCATGTCAAAGCATTTATTGCCATAGATGGATGGGGCGT ACCACTGTGGGGAAATTTTCCCATTCATCGGCTCAGTCATGATTATTTCACTCATTGGAGTTCATTGTTACTAGGAAGTG GGCAAACTAATTTTTACGCAGAACCACCCGTTGAACATTTAACCATGTGGCGATCGCCCCAAACCGTACAAGGCTGGCAA GTTGATATGTATGTCAAAAATACTACTTCAAATACCCGTTTAACTGCGGCTGAGTTTTTACATTTATTGTTAAGACACTA TGAAGCAAAATAG
Upstream 100 bases:
>100_bases AGGGAAAAATATTTAACACTATATGCTTTGAGGAAGAAATGTTAACTGTTGACCAATGACAACTGACAAATGACAAATGA CAACTGACTATAATTTATAA
Downstream 100 bases:
>100_bases TCCGGAAAACCGTCACAGTTACCAGGAGTGAAATATTGAGTGATGAGACAATCAGTAGGGATATGGAAAATGAAGATGAA AAACTCCAGATTCCATTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSIIICPGIHDSDLTESFVSGCLGAFSGNSISQKPVEILVVPVAGVLTLSSLHILQFLHDRLGNKLKSPVIFISFSAGVV GAIAAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSHDYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWQ VDMYVKNTTSNTRLTAAEFLHLLLRHYEAK
Sequences:
>Translated_190_residues MSIIICPGIHDSDLTESFVSGCLGAFSGNSISQKPVEILVVPVAGVLTLSSLHILQFLHDRLGNKLKSPVIFISFSAGVV GAIAAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSHDYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWQ VDMYVKNTTSNTRLTAAEFLHLLLRHYEAK >Mature_189_residues SIIICPGIHDSDLTESFVSGCLGAFSGNSISQKPVEILVVPVAGVLTLSSLHILQFLHDRLGNKLKSPVIFISFSAGVVG AIAAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSHDYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWQV DMYVKNTTSNTRLTAAEFLHLLLRHYEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21066; Mature: 20935
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIICPGIHDSDLTESFVSGCLGAFSGNSISQKPVEILVVPVAGVLTLSSLHILQFLHD CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH RLGNKLKSPVIFISFSAGVVGAIAAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSH HHCHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHCH DYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWQVDMYVKNTTSNTRLTAAEFL HHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCEECHHHHH HLLLRHYEAK HHHHHHHCCC >Mature Secondary Structure SIIICPGIHDSDLTESFVSGCLGAFSGNSISQKPVEILVVPVAGVLTLSSLHILQFLHD EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH RLGNKLKSPVIFISFSAGVVGAIAAAWQWQNWGGHVKAFIAIDGWGVPLWGNFPIHRLSH HHCHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHCH DYFTHWSSLLLGSGQTNFYAEPPVEHLTMWRSPQTVQGWQVDMYVKNTTSNTRLTAAEFL HHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCEECHHHHH HLLLRHYEAK HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA