| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231968
Identifier: 17231968
GI number: 17231968
Start: 5361274
End: 5361720
Strand: Reverse
Name: 17231968
Synonym: all4476
Alternate gene names: NA
Gene position: 5361720-5361274 (Counterclockwise)
Preceding gene: 17231969
Following gene: 17231967
Centisome position: 83.6
GC content: 44.74
Gene sequence:
>447_bases ATGATGCAAATGAATTGTCCTGTATGTAGTTACCAAGATATTACAGGCGATACTTGCCCCAATTGTGATGCTGATTTACG TGTAATTCGGATGCTGCAAGCGTTACCGCAAGTCCCCACTCAATCGCCGTGGCCATTAAGAATCGCCCTGTTGCTGCTAA TTATTGCCATAGGTCTGGGAGTGGCGACGAATTTTATATTTTCTCGACCGCAGTTAAATACAGTAGTTATTACTCAACCA AGCCCTGTTACACCCCAAAAACCACCAGAACCAACCACCTACACAGTTCAAGCGGGAGATAATCTCAGTGCGATCGCTCA GAAATTGTGTGGTCAGGGAGTTTCTTTGCAAACAATGGTGCAAGCCAACCCCCAACTCATAGGAAGAGAAAACTATCTAG AGGTGGGTCAGGTGTTGAAAATTCCTCATTGCCAGGAGGATATTTAA
Upstream 100 bases:
>100_bases GACAAGAAAGCGATCGCTTGTGGCAAGAATTACAACCAGATGTGAAACTTTGGCTCAATCAGGAATTACCGAGCAATATG ATTGCTACAGGAATCAGCCG
Downstream 100 bases:
>100_bases TGAACCTGCTGGAAAGCTTAAATAAATTAACTAAGAATCATTTAGGAATAGGAATTGTTGATGCTTGGCTGAAAGCACCA CAAACGAAGGAAGCGAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLGVATNFIFSRPQLNTVVITQP SPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMVQANPQLIGRENYLEVGQVLKIPHCQEDI
Sequences:
>Translated_148_residues MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLGVATNFIFSRPQLNTVVITQP SPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMVQANPQLIGRENYLEVGQVLKIPHCQEDI >Mature_148_residues MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLGVATNFIFSRPQLNTVVITQP SPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMVQANPQLIGRENYLEVGQVLKIPHCQEDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16167; Mature: 16167
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VATNFIFSRPQLNTVVITQPSPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMV HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEHHH QANPQLIGRENYLEVGQVLKIPHCQEDI HCCCCEECCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VATNFIFSRPQLNTVVITQPSPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMV HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEHHH QANPQLIGRENYLEVGQVLKIPHCQEDI HCCCCEECCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA