Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17231968

Identifier: 17231968

GI number: 17231968

Start: 5361274

End: 5361720

Strand: Reverse

Name: 17231968

Synonym: all4476

Alternate gene names: NA

Gene position: 5361720-5361274 (Counterclockwise)

Preceding gene: 17231969

Following gene: 17231967

Centisome position: 83.6

GC content: 44.74

Gene sequence:

>447_bases
ATGATGCAAATGAATTGTCCTGTATGTAGTTACCAAGATATTACAGGCGATACTTGCCCCAATTGTGATGCTGATTTACG
TGTAATTCGGATGCTGCAAGCGTTACCGCAAGTCCCCACTCAATCGCCGTGGCCATTAAGAATCGCCCTGTTGCTGCTAA
TTATTGCCATAGGTCTGGGAGTGGCGACGAATTTTATATTTTCTCGACCGCAGTTAAATACAGTAGTTATTACTCAACCA
AGCCCTGTTACACCCCAAAAACCACCAGAACCAACCACCTACACAGTTCAAGCGGGAGATAATCTCAGTGCGATCGCTCA
GAAATTGTGTGGTCAGGGAGTTTCTTTGCAAACAATGGTGCAAGCCAACCCCCAACTCATAGGAAGAGAAAACTATCTAG
AGGTGGGTCAGGTGTTGAAAATTCCTCATTGCCAGGAGGATATTTAA

Upstream 100 bases:

>100_bases
GACAAGAAAGCGATCGCTTGTGGCAAGAATTACAACCAGATGTGAAACTTTGGCTCAATCAGGAATTACCGAGCAATATG
ATTGCTACAGGAATCAGCCG

Downstream 100 bases:

>100_bases
TGAACCTGCTGGAAAGCTTAAATAAATTAACTAAGAATCATTTAGGAATAGGAATTGTTGATGCTTGGCTGAAAGCACCA
CAAACGAAGGAAGCGAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLGVATNFIFSRPQLNTVVITQP
SPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMVQANPQLIGRENYLEVGQVLKIPHCQEDI

Sequences:

>Translated_148_residues
MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLGVATNFIFSRPQLNTVVITQP
SPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMVQANPQLIGRENYLEVGQVLKIPHCQEDI
>Mature_148_residues
MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLGVATNFIFSRPQLNTVVITQP
SPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMVQANPQLIGRENYLEVGQVLKIPHCQEDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16167; Mature: 16167

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VATNFIFSRPQLNTVVITQPSPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMV
HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEHHH
QANPQLIGRENYLEVGQVLKIPHCQEDI
HCCCCEECCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMQMNCPVCSYQDITGDTCPNCDADLRVIRMLQALPQVPTQSPWPLRIALLLLIIAIGLG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VATNFIFSRPQLNTVVITQPSPVTPQKPPEPTTYTVQAGDNLSAIAQKLCGQGVSLQTMV
HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEHHH
QANPQLIGRENYLEVGQVLKIPHCQEDI
HCCCCEECCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA