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The map label for this gene is dcyD [C]

Identifier: 17231939

GI number: 17231939

Start: 5332703

End: 5333650

Strand: Direct

Name: dcyD [C]

Synonym: alr4447

Alternate gene names: 17231939

Gene position: 5332703-5333650 (Clockwise)

Preceding gene: 17231931

Following gene: 17231940

Centisome position: 83.14

GC content: 42.19

Gene sequence:

>948_bases
ATGTCATTGACCTTTGTTCCTCCGCCAATACAAAAAATCAATAGTGAGATTGCTAATAATGCTGGTGTAGAAATTTATGT
ATTACGCCTTGATTTAATGCACCCGTGGGTAAACGGTAATAAGTGGTACAAGCTGAAATACAATCTCTTAGAAGCTAAGG
AGAAAAGTTACACAAAATTACTCACCTTTGGTGGTGCATATTCTAATCACATCTTCGCTACTGCCGCAGCAGGTAATCTT
TTAGGATTCCAGACTATTGGTATAATTCGTGGGGAAGAAACCTTACCCTTAAATCCCACACTAAGTTTTGCAACGCAACA
AGGTATGCAGCTTGTCTATGTGGACAGGGAAACCTATCGACAACGAAACAGCACCACATTACACACAGACCTAAGGAAAC
GCTTTGGTGAGGTATTTATCATTCCAGAAGGTGGTAGTAATTTGAATGGTGTGCGTGGTTGTCTAGAAATAATAAGTGCC
GCAACACAAGTATTTGATATTGTTTGTGTAGCTTGTGGTACAGCCACCACCCTAGCAGGTATCGCTCTGGCACTGGAACC
TCAGCAACGTGTGATTGGTTTTCCTGTCTTAAAAAATGGGGGTTTTTTAGCACAGGATATTGCTCAGTTAATGAAGAATT
ATGTCGCGGCGGGGTTGCCCATTTCATCTAGTTCTCCCGCCTCTTGGGAATTAGTTTGCGATTACCATTTTGGCGGTTAC
GCCAAGGTGAAAGATGATCTCATACTGTTCAGTCACCAGTTTACCCAAAGCTACGGCGTACCTCTTGATTACGTGTATAC
AGCGAAAATGTTTTACGGCGTAATGGACTTGTTAAAGCAAAGATATTTTACGAAAGGTGATGGTCTCCGACCGACCGTAG
GTCATCGTATCTTAATGATTCACACGGGTGGCTTACAGGGAAATATCGGGATGAGTGAACGATTGTAA

Upstream 100 bases:

>100_bases
CAAGTGCTGTTAACTGTGAACGATCAACAGTCAACAAACCTTACGATGGATTATGCAACTTAAAAGCACAATACCTTATC
ACTCTCCATAGAATTCATCG

Downstream 100 bases:

>100_bases
TGGTTTTGAGGAAATATATTTTCCCGGATTATTTAACATTTGTTTTTCTATATTTCATCAGTATAATTACTCTAAAAACT
TTAAAACTTTAATGTGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: ACC deaminase [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSLTFVPPPIQKINSEIANNAGVEIYVLRLDLMHPWVNGNKWYKLKYNLLEAKEKSYTKLLTFGGAYSNHIFATAAAGNL
LGFQTIGIIRGEETLPLNPTLSFATQQGMQLVYVDRETYRQRNSTTLHTDLRKRFGEVFIIPEGGSNLNGVRGCLEIISA
ATQVFDIVCVACGTATTLAGIALALEPQQRVIGFPVLKNGGFLAQDIAQLMKNYVAAGLPISSSSPASWELVCDYHFGGY
AKVKDDLILFSHQFTQSYGVPLDYVYTAKMFYGVMDLLKQRYFTKGDGLRPTVGHRILMIHTGGLQGNIGMSERL

Sequences:

>Translated_315_residues
MSLTFVPPPIQKINSEIANNAGVEIYVLRLDLMHPWVNGNKWYKLKYNLLEAKEKSYTKLLTFGGAYSNHIFATAAAGNL
LGFQTIGIIRGEETLPLNPTLSFATQQGMQLVYVDRETYRQRNSTTLHTDLRKRFGEVFIIPEGGSNLNGVRGCLEIISA
ATQVFDIVCVACGTATTLAGIALALEPQQRVIGFPVLKNGGFLAQDIAQLMKNYVAAGLPISSSSPASWELVCDYHFGGY
AKVKDDLILFSHQFTQSYGVPLDYVYTAKMFYGVMDLLKQRYFTKGDGLRPTVGHRILMIHTGGLQGNIGMSERL
>Mature_314_residues
SLTFVPPPIQKINSEIANNAGVEIYVLRLDLMHPWVNGNKWYKLKYNLLEAKEKSYTKLLTFGGAYSNHIFATAAAGNLL
GFQTIGIIRGEETLPLNPTLSFATQQGMQLVYVDRETYRQRNSTTLHTDLRKRFGEVFIIPEGGSNLNGVRGCLEIISAA
TQVFDIVCVACGTATTLAGIALALEPQQRVIGFPVLKNGGFLAQDIAQLMKNYVAAGLPISSSSPASWELVCDYHFGGYA
KVKDDLILFSHQFTQSYGVPLDYVYTAKMFYGVMDLLKQRYFTKGDGLRPTVGHRILMIHTGGLQGNIGMSERL

Specific function: Catalyzes The Alpha,Beta-Elimination Reaction Of D-Cysteine And Of Several D-Cysteine Derivatives. It Could Be A Defense Mechanism Against D-Cysteine. Can Also Catalyze The Degradation Of 3-Chloro-D-Alanine. [C]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=316, Percent_Identity=27.8481012658228, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =3.5.99.7 [H]

Molecular weight: Translated: 34801; Mature: 34669

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTFVPPPIQKINSEIANNAGVEIYVLRLDLMHPWVNGNKWYKLKYNLLEAKEKSYTKL
CCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEHHHHHHHHHEE
LTFGGAYSNHIFATAAAGNLLGFQTIGIIRGEETLPLNPTLSFATQQGMQLVYVDRETYR
EEECCCCCCCEEEEECCCCEECEEEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEHHHHH
QRNSTTLHTDLRKRFGEVFIIPEGGSNLNGVRGCLEIISAATQVFDIVCVACGTATTLAG
CCCCCEEHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IALALEPQQRVIGFPVLKNGGFLAQDIAQLMKNYVAAGLPISSSSPASWELVCDYHFGGY
EEEEECCCHHEEECEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCE
AKVKDDLILFSHQFTQSYGVPLDYVYTAKMFYGVMDLLKQRYFTKGDGLRPTVGHRILMI
EEECCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
HTGGLQGNIGMSERL
EECCCCCCCCHHCCC
>Mature Secondary Structure 
SLTFVPPPIQKINSEIANNAGVEIYVLRLDLMHPWVNGNKWYKLKYNLLEAKEKSYTKL
CCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEHHHHHHHHHEE
LTFGGAYSNHIFATAAAGNLLGFQTIGIIRGEETLPLNPTLSFATQQGMQLVYVDRETYR
EEECCCCCCCEEEEECCCCEECEEEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEHHHHH
QRNSTTLHTDLRKRFGEVFIIPEGGSNLNGVRGCLEIISAATQVFDIVCVACGTATTLAG
CCCCCEEHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IALALEPQQRVIGFPVLKNGGFLAQDIAQLMKNYVAAGLPISSSSPASWELVCDYHFGGY
EEEEECCCHHEEECEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCE
AKVKDDLILFSHQFTQSYGVPLDYVYTAKMFYGVMDLLKQRYFTKGDGLRPTVGHRILMI
EEECCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
HTGGLQGNIGMSERL
EECCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]