| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is era [C]
Identifier: 17231876
GI number: 17231876
Start: 5255695
End: 5257170
Strand: Reverse
Name: era [C]
Synonym: all4384
Alternate gene names: 17231876
Gene position: 5257170-5255695 (Counterclockwise)
Preceding gene: 17231879
Following gene: 17231874
Centisome position: 81.97
GC content: 45.12
Gene sequence:
>1476_bases ATGACCTCAATATTACCCTTGCCTGATCCTCAACCAAGCGATGCAACCAATACTGATACAAGTTCTCTCAACTGGGAGGA AGAACTTGATAGTGCCATTTTTAGCTTTGAAGATATTCAAGCAGAACTCAACTATAAACAAGCGCAATCGGCGCTGCGGA ACTTAGTAGACAATATTGACCTCAGTTCTCAGGAAAAGGCTGGCTTAGAGTCAGAAATAGCTGATTTAGAAACCATGTTG GGGAAGTTAGACAGCATGGTGGTACAAATCGCTGCTTTTGGCATGGTGGGACGAGGTAAGTCTTCTTTGCTCAATGCGTT GGTGGGGGAATCTGTATTTGAAACGGGGCCTTTGCATGGTGTTACCCGTGCGGCTCAACGGGTCAATTGGCGGATTAGTG AAGAGGCGATTGGGGAAACAGAACGGGCTTTGCGTGTCACTTTACCATCGGTTGGGCGATCGCAGGTAGAGTTAATTGAT ACCCCTGGGTTAGATGAAATTGATGGAGAAACCCGCACTGCTTTGGCGGAACAGATAGCGAAGCAAGCAGATTTAATTTT GTTTGTGATTTCTGGCGACATGACCAAAATTGAGCATGAAGCCCTTTCTCAATTACGAGAAGCAGGTAAACCCATAATTC TGGTATTTAACAAGGTAGACCAATATCCAGAAGCCGATAGGACAGCAATTTACCAGAAGATTCGGGATGAACGGGTGCGG GAGTTACTGACACCACTAGAGATTGTCATGGCAGCTGCATCACCACTGGTAAAAACTGCCGTGCGTCGTCCTGATGGCAG TAGGGGGGTGCAGGTGCGTACAGGTAACGCTCAAGTGGCAGAACTCCAGGTGAAGATTTTGGAGATTTTACAACGGGAGG GCAAGGCTTTAGTTGCATTAAATACGATGCTGTTTGCCGATAATGTAAATGAGCAATTGGTGCAGCGTAAATTGATGATT CGGGAGCAGAACGCGAATCAGTTGATTTGGAAAGCCGTCATGACTAAAGCGGTGGCGATCGCTCTCAATCCTGTTACTGT AGTAGATATACTGAGCAGTATAGTAATTGATATTTCTCTTATCTTGGGCTTATCTAAACTCTATGGTATTCCCATGACTG AAGCAGGTGCTGTGCAATTGCTGCAAAAAATTGCCTTGAGTATGGGTGGTATCGGTGTTAGTGAACTCCTGGCAAATTTG GGTTTAAGTGGTTTAAAAACTTTACTTGGTATCTCTGCAACTGCTACAGCTGGTATTTCCTTGGGGCCTTATATCTCAGT TGCTATTACCCAGGCTGGTGTAGCTGGCGTGTCTTCCTATGGTATTGGGCAAGTGACTAAAGTCTATTTAGCCAATGGGG CAACATGGGGGCCAGATGGGCCGAAAGCCGTAATTAACCGAATTTTGGCAACCCTTGATGAAAATTCTATTCTCAATCGC ATCAAAGATGAATTACAGGTAAAACTTCATCGGTAA
Upstream 100 bases:
>100_bases TGTTCTCTAGCTTGCTTATTTGCCCAATATCCTGCGAAAAATTACTAGGATGGAAAATAAAGCTAGTTTAAAAATTAAAA TTTAAAATATAGAACTGAAT
Downstream 100 bases:
>100_bases AATTAATAAAACGGTTATTAGTTCCAGGTTAAGAATAGCTAAATTCCAATTTGCTCTCTTACCCACTTTCTAAATGCCCT CTGATTCTTAATCTATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: GTPase SAR1 And Related Small G Proteins; Membrane Associated GTPase; GTPase SAR1 And Related Small G Protein; GTPase SAR1-Like Protein; Dynamin Family Protein
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MTSILPLPDPQPSDATNTDTSSLNWEEELDSAIFSFEDIQAELNYKQAQSALRNLVDNIDLSSQEKAGLESEIADLETML GKLDSMVVQIAAFGMVGRGKSSLLNALVGESVFETGPLHGVTRAAQRVNWRISEEAIGETERALRVTLPSVGRSQVELID TPGLDEIDGETRTALAEQIAKQADLILFVISGDMTKIEHEALSQLREAGKPIILVFNKVDQYPEADRTAIYQKIRDERVR ELLTPLEIVMAAASPLVKTAVRRPDGSRGVQVRTGNAQVAELQVKILEILQREGKALVALNTMLFADNVNEQLVQRKLMI REQNANQLIWKAVMTKAVAIALNPVTVVDILSSIVIDISLILGLSKLYGIPMTEAGAVQLLQKIALSMGGIGVSELLANL GLSGLKTLLGISATATAGISLGPYISVAITQAGVAGVSSYGIGQVTKVYLANGATWGPDGPKAVINRILATLDENSILNR IKDELQVKLHR
Sequences:
>Translated_491_residues MTSILPLPDPQPSDATNTDTSSLNWEEELDSAIFSFEDIQAELNYKQAQSALRNLVDNIDLSSQEKAGLESEIADLETML GKLDSMVVQIAAFGMVGRGKSSLLNALVGESVFETGPLHGVTRAAQRVNWRISEEAIGETERALRVTLPSVGRSQVELID TPGLDEIDGETRTALAEQIAKQADLILFVISGDMTKIEHEALSQLREAGKPIILVFNKVDQYPEADRTAIYQKIRDERVR ELLTPLEIVMAAASPLVKTAVRRPDGSRGVQVRTGNAQVAELQVKILEILQREGKALVALNTMLFADNVNEQLVQRKLMI REQNANQLIWKAVMTKAVAIALNPVTVVDILSSIVIDISLILGLSKLYGIPMTEAGAVQLLQKIALSMGGIGVSELLANL GLSGLKTLLGISATATAGISLGPYISVAITQAGVAGVSSYGIGQVTKVYLANGATWGPDGPKAVINRILATLDENSILNR IKDELQVKLHR >Mature_490_residues TSILPLPDPQPSDATNTDTSSLNWEEELDSAIFSFEDIQAELNYKQAQSALRNLVDNIDLSSQEKAGLESEIADLETMLG KLDSMVVQIAAFGMVGRGKSSLLNALVGESVFETGPLHGVTRAAQRVNWRISEEAIGETERALRVTLPSVGRSQVELIDT PGLDEIDGETRTALAEQIAKQADLILFVISGDMTKIEHEALSQLREAGKPIILVFNKVDQYPEADRTAIYQKIRDERVRE LLTPLEIVMAAASPLVKTAVRRPDGSRGVQVRTGNAQVAELQVKILEILQREGKALVALNTMLFADNVNEQLVQRKLMIR EQNANQLIWKAVMTKAVAIALNPVTVVDILSSIVIDISLILGLSKLYGIPMTEAGAVQLLQKIALSMGGIGVSELLANLG LSGLKTLLGISATATAGISLGPYISVAITQAGVAGVSSYGIGQVTKVYLANGATWGPDGPKAVINRILATLDENSILNRI KDELQVKLHR
Specific function: Binds Both GDP And GTP, Has An Intrinsic GTPase Activity And Is Essential For Cell Growth. [C]
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Membrane-Bound [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52925; Mature: 52794
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSILPLPDPQPSDATNTDTSSLNWEEELDSAIFSFEDIQAELNYKQAQSALRNLVDNID CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC LSSQEKAGLESEIADLETMLGKLDSMVVQIAAFGMVGRGKSSLLNALVGESVFETGPLHG CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH VTRAAQRVNWRISEEAIGETERALRVTLPSVGRSQVELIDTPGLDEIDGETRTALAEQIA HHHHHHHHCCEECHHHHCCHHHHEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH KQADLILFVISGDMTKIEHEALSQLREAGKPIILVFNKVDQYPEADRTAIYQKIRDERVR HHCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH ELLTPLEIVMAAASPLVKTAVRRPDGSRGVQVRTGNAQVAELQVKILEILQREGKALVAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEE NTMLFADNVNEQLVQRKLMIREQNANQLIWKAVMTKAVAIALNPVTVVDILSSIVIDISL HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ILGLSKLYGIPMTEAGAVQLLQKIALSMGGIGVSELLANLGLSGLKTLLGISATATAGIS HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCHHHHCCCC LGPYISVAITQAGVAGVSSYGIGQVTKVYLANGATWGPDGPKAVINRILATLDENSILNR CCCHHEEEEHHHHHHHHCCCCCCHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHH IKDELQVKLHR HHHHHHHHCCC >Mature Secondary Structure TSILPLPDPQPSDATNTDTSSLNWEEELDSAIFSFEDIQAELNYKQAQSALRNLVDNID CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC LSSQEKAGLESEIADLETMLGKLDSMVVQIAAFGMVGRGKSSLLNALVGESVFETGPLHG CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH VTRAAQRVNWRISEEAIGETERALRVTLPSVGRSQVELIDTPGLDEIDGETRTALAEQIA HHHHHHHHCCEECHHHHCCHHHHEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH KQADLILFVISGDMTKIEHEALSQLREAGKPIILVFNKVDQYPEADRTAIYQKIRDERVR HHCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH ELLTPLEIVMAAASPLVKTAVRRPDGSRGVQVRTGNAQVAELQVKILEILQREGKALVAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEE NTMLFADNVNEQLVQRKLMIREQNANQLIWKAVMTKAVAIALNPVTVVDILSSIVIDISL HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ILGLSKLYGIPMTEAGAVQLLQKIALSMGGIGVSELLANLGLSGLKTLLGISATATAGIS HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCHHHHCCCC LGPYISVAITQAGVAGVSSYGIGQVTKVYLANGATWGPDGPKAVINRILATLDENSILNR CCCHHEEEEHHHHHHHHCCCCCCHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHH IKDELQVKLHR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA