| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is fus [C]
Identifier: 17231875
GI number: 17231875
Start: 5253354
End: 5255438
Strand: Direct
Name: fus [C]
Synonym: alr4383
Alternate gene names: 17231875
Gene position: 5253354-5255438 (Clockwise)
Preceding gene: 17231872
Following gene: 17231877
Centisome position: 81.91
GC content: 47.77
Gene sequence:
>2085_bases ATGAGCGAAAAAGTCAGATTAGGTTCGCGGAATGTTGCCATTGTCGGCCCTTATTTAAGTGGAAAAACAACTTTACTAGA AAGCTTATTATTTGTCACAGGAGCGATTTCTCGCAAAGGCAGCGTTAAGGATACTAACACAGTTGGGGATAGTGCGAATG AATCACGCGATCGCCACATGAGCGTAGAAATCAGCACTGCCTGCGCTGAGTATAACGACATTCGTTTTACCTTTATAGAC TGTCCGGGTAGCGTTGAATTTACCCAAGAAACATATAACGCGCTCATGGGCGTTGATGCGGCAATTGTAGTCTGCGAACC AATACGTGAAAGAGTCCTCACCCTTGCTCCTCTATTTAAATTCCTAGACGATTGGGAAATTCCCCATCTTGTCTTTGTGA ATAAAATGGATCGAGCAAACATTCATGTCCTCGAAACATTACACGCCCTCAAAGCAGTTTCCAGTCGTCCCTTAGTAGCT CACCAATACCCCATCATGCAGAGAGAAGTTGGAGCGGCGGCTTCCGCCGATCCAAACTTCGGGGGGGAACAACTCACCGG CTTTATCGACATGGTGAGTGAACAAGCCTATCAATATCATCCCGGCGCACCAGCTGACCCCATTCCCTTCCCTGAACATC TCAAACAAGAAGAACATACCGCACGGGCAGAAATGCTCGAAGCCTTAGCAAATTTTGATGACCATTTATTGGAAGAGCTT TTAGAAGATATTGAACCACCAGCAGAAGAAATCCTCAAAGATTTAAAAATGGAATTAGGGGCAGATTTAGTAGTTCCCGT CTTCTTTGGTGTCGCGGAACAAGATTATGGTGTCAGACCTTTATTAGAAGCTTTACTCAGGGAAGCCCCCGAACCAGAAA CCACCGCCGCCCGTCGCCTCAAAGGAAAAGTTAGTCATACACCCATAGCCCAAGTCTTAAAAACCTATTACACTCCCCAA GGTGGCAAACTTTCCCTCGTGCGAGTATGGCAAGGCAAACTCACCGATGGTATCATCCTCAACGGCGTGCGCGCTGGTGG GATTTATCGCCTCATGGGACAACAACAGCAATCGGTGAACGAAGTCGGTGCAGGTGAAATTGTCGCCCTCAGCCGTTTAG AAGGAATTAAAACCGGGGATACCATCTCCACAGAACAGCCGACGCAATTACCCAAAGCCCAACAGTTAGAGCCAGTTTAC GCCCTCGCCATCACCCCAGAAAAGCGCAACGATGAAGTTAAACTCAGCAACGCTATCACCAAACTCTTAGAAGAAGACCC CTCTTTAGCTTGGGAACAACACGGCGACACCCACGAAGTGATTTTGTGGGGACAAGGCGAGATTCATTTGCAAGTCGCCC TGGATAGACTGCGCCGCAAATATAACTTGCCCATGTCTACCCATTTGCCACAAGTGCCTTATAAAGAAACCATCCGTAAA CCAGTCACCTCAGTACATGGACGCTACAAACACCAAAGCGGTGGTCATGGACAGTTCGGTGATGTGTTCCTGGATATCAA ACCCCTACCACGGGGTGAAGGCTTCAACTTTAAAGAAAGCATTGTTGGTGGTGTAGTACCTAGACAGTATATTCCTGGGG TAGAAATGGGTGTGCGGGAATTTCTTGTACATGGGCCTTTAGGCTTCCCAGTGGTTGATGTGGCGGTGACATTAACAAAT GGTTCCTATCACACCGTTGATAGTTCCGAACAAGCCTTCAAGCAAGCCGCCCGTTTAGCCATGCAAACAGGCATACCCCA AGCCCAACCCACCTTATTAGAGCCGATTTTGCGGGTGGAAGTGACAACACCCAGTGAGTTTACCTCTAAGGTGCTGCAAT TATTGAGTGGTAGACGTGGGCAAATTTTGGGCTACGAAGGCAGACAAGATTGGCAAGGCTGGGATAATATTTCTGCTTAC CTACCACAAGCCGAGATGCAAAACTTTATTGTAGAGCTGCGATCGCTCACTCTCGGCGTTGGTTCATTCCATTGGGCTTA TGACCACCTGCAAGAAGTCCCAGAAAAGCTTGCTGAACGCGTACTTGCTAGTAACGGTAATGGTAGTAACGGCAATGGCA AGTAG
Upstream 100 bases:
>100_bases GGAAGGATAATAACAAGTTAAAGAGAGGGTAATTCTCGGATTATTCATCTTTGACAAAACAGGGCAATGCGGTATTGAGA CTTACCGCAAGGGAGGTTTT
Downstream 100 bases:
>100_bases TATCAGTTAACGAATGTCTCCTCTATTCAGAATCTTGGAGTGGTAATATTTATCACTCCAATTTTTTATCACTATTCACC TTCAGAATATGGACATAATT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 694; Mature: 693
Protein sequence:
>694_residues MSEKVRLGSRNVAIVGPYLSGKTTLLESLLFVTGAISRKGSVKDTNTVGDSANESRDRHMSVEISTACAEYNDIRFTFID CPGSVEFTQETYNALMGVDAAIVVCEPIRERVLTLAPLFKFLDDWEIPHLVFVNKMDRANIHVLETLHALKAVSSRPLVA HQYPIMQREVGAAASADPNFGGEQLTGFIDMVSEQAYQYHPGAPADPIPFPEHLKQEEHTARAEMLEALANFDDHLLEEL LEDIEPPAEEILKDLKMELGADLVVPVFFGVAEQDYGVRPLLEALLREAPEPETTAARRLKGKVSHTPIAQVLKTYYTPQ GGKLSLVRVWQGKLTDGIILNGVRAGGIYRLMGQQQQSVNEVGAGEIVALSRLEGIKTGDTISTEQPTQLPKAQQLEPVY ALAITPEKRNDEVKLSNAITKLLEEDPSLAWEQHGDTHEVILWGQGEIHLQVALDRLRRKYNLPMSTHLPQVPYKETIRK PVTSVHGRYKHQSGGHGQFGDVFLDIKPLPRGEGFNFKESIVGGVVPRQYIPGVEMGVREFLVHGPLGFPVVDVAVTLTN GSYHTVDSSEQAFKQAARLAMQTGIPQAQPTLLEPILRVEVTTPSEFTSKVLQLLSGRRGQILGYEGRQDWQGWDNISAY LPQAEMQNFIVELRSLTLGVGSFHWAYDHLQEVPEKLAERVLASNGNGSNGNGK
Sequences:
>Translated_694_residues MSEKVRLGSRNVAIVGPYLSGKTTLLESLLFVTGAISRKGSVKDTNTVGDSANESRDRHMSVEISTACAEYNDIRFTFID CPGSVEFTQETYNALMGVDAAIVVCEPIRERVLTLAPLFKFLDDWEIPHLVFVNKMDRANIHVLETLHALKAVSSRPLVA HQYPIMQREVGAAASADPNFGGEQLTGFIDMVSEQAYQYHPGAPADPIPFPEHLKQEEHTARAEMLEALANFDDHLLEEL LEDIEPPAEEILKDLKMELGADLVVPVFFGVAEQDYGVRPLLEALLREAPEPETTAARRLKGKVSHTPIAQVLKTYYTPQ GGKLSLVRVWQGKLTDGIILNGVRAGGIYRLMGQQQQSVNEVGAGEIVALSRLEGIKTGDTISTEQPTQLPKAQQLEPVY ALAITPEKRNDEVKLSNAITKLLEEDPSLAWEQHGDTHEVILWGQGEIHLQVALDRLRRKYNLPMSTHLPQVPYKETIRK PVTSVHGRYKHQSGGHGQFGDVFLDIKPLPRGEGFNFKESIVGGVVPRQYIPGVEMGVREFLVHGPLGFPVVDVAVTLTN GSYHTVDSSEQAFKQAARLAMQTGIPQAQPTLLEPILRVEVTTPSEFTSKVLQLLSGRRGQILGYEGRQDWQGWDNISAY LPQAEMQNFIVELRSLTLGVGSFHWAYDHLQEVPEKLAERVLASNGNGSNGNGK >Mature_693_residues SEKVRLGSRNVAIVGPYLSGKTTLLESLLFVTGAISRKGSVKDTNTVGDSANESRDRHMSVEISTACAEYNDIRFTFIDC PGSVEFTQETYNALMGVDAAIVVCEPIRERVLTLAPLFKFLDDWEIPHLVFVNKMDRANIHVLETLHALKAVSSRPLVAH QYPIMQREVGAAASADPNFGGEQLTGFIDMVSEQAYQYHPGAPADPIPFPEHLKQEEHTARAEMLEALANFDDHLLEELL EDIEPPAEEILKDLKMELGADLVVPVFFGVAEQDYGVRPLLEALLREAPEPETTAARRLKGKVSHTPIAQVLKTYYTPQG GKLSLVRVWQGKLTDGIILNGVRAGGIYRLMGQQQQSVNEVGAGEIVALSRLEGIKTGDTISTEQPTQLPKAQQLEPVYA LAITPEKRNDEVKLSNAITKLLEEDPSLAWEQHGDTHEVILWGQGEIHLQVALDRLRRKYNLPMSTHLPQVPYKETIRKP VTSVHGRYKHQSGGHGQFGDVFLDIKPLPRGEGFNFKESIVGGVVPRQYIPGVEMGVREFLVHGPLGFPVVDVAVTLTNG SYHTVDSSEQAFKQAARLAMQTGIPQAQPTLLEPILRVEVTTPSEFTSKVLQLLSGRRGQILGYEGRQDWQGWDNISAYL PQAEMQNFIVELRSLTLGVGSFHWAYDHLQEVPEKLAERVLASNGNGSNGNGK
Specific function: This Protein Promotes The GTP-Dependent Translocation Of The Nascent Protein Chain From The A-Site To The P-Site Of The Ribosome. [C]
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=695, Percent_Identity=29.6402877697842, Blast_Score=280, Evalue=3e-75, Organism=Homo sapiens, GI19923640, Length=709, Percent_Identity=25.9520451339915, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI25306287, Length=703, Percent_Identity=25.1778093883357, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI25306283, Length=397, Percent_Identity=24.9370277078086, Blast_Score=102, Evalue=1e-21, Organism=Escherichia coli, GI1789738, Length=712, Percent_Identity=32.1629213483146, Blast_Score=342, Evalue=6e-95, Organism=Escherichia coli, GI1790835, Length=475, Percent_Identity=22.9473684210526, Blast_Score=95, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17533571, Length=706, Percent_Identity=28.328611898017, Blast_Score=273, Evalue=2e-73, Organism=Caenorhabditis elegans, GI17556745, Length=725, Percent_Identity=22.2068965517241, Blast_Score=125, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6323098, Length=693, Percent_Identity=31.1688311688312, Blast_Score=294, Evalue=3e-80, Organism=Saccharomyces cerevisiae, GI6322359, Length=802, Percent_Identity=23.6907730673317, Blast_Score=167, Evalue=4e-42, Organism=Drosophila melanogaster, GI24582462, Length=691, Percent_Identity=31.8379160636758, Blast_Score=292, Evalue=5e-79, Organism=Drosophila melanogaster, GI221458488, Length=723, Percent_Identity=25.7261410788382, Blast_Score=172, Evalue=1e-42,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76725; Mature: 76594
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKVRLGSRNVAIVGPYLSGKTTLLESLLFVTGAISRKGSVKDTNTVGDSANESRDRHM CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE SVEISTACAEYNDIRFTFIDCPGSVEFTQETYNALMGVDAAIVVCEPIRERVLTLAPLFK EEEEHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHH FLDDWEIPHLVFVNKMDRANIHVLETLHALKAVSSRPLVAHQYPIMQREVGAAASADPNF HHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCCCCCC GGEQLTGFIDMVSEQAYQYHPGAPADPIPFPEHLKQEEHTARAEMLEALANFDDHLLEEL CHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LEDIEPPAEEILKDLKMELGADLVVPVFFGVAEQDYGVRPLLEALLREAPEPETTAARRL HHHCCCCHHHHHHHHHHHHCCCEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH KGKVSHTPIAQVLKTYYTPQGGKLSLVRVWQGKLTDGIILNGVRAGGIYRLMGQQQQSVN HCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHCCHHHHHH EVGAGEIVALSRLEGIKTGDTISTEQPTQLPKAQQLEPVYALAITPEKRNDEVKLSNAIT HCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHH KLLEEDPSLAWEQHGDTHEVILWGQGEIHLQVALDRLRRKYNLPMSTHLPQVPYKETIRK HHHHCCCCCHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHH PVTSVHGRYKHQSGGHGQFGDVFLDIKPLPRGEGFNFKESIVGGVVPRQYIPGVEMGVRE HHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCHHHCCCHHHHHHH FLVHGPLGFPVVDVAVTLTNGSYHTVDSSEQAFKQAARLAMQTGIPQAQPTLLEPILRVE HHHHCCCCCCEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEE VTTPSEFTSKVLQLLSGRRGQILGYEGRQDWQGWDNISAYLPQAEMQNFIVELRSLTLGV ECCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCC GSFHWAYDHLQEVPEKLAERVLASNGNGSNGNGK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SEKVRLGSRNVAIVGPYLSGKTTLLESLLFVTGAISRKGSVKDTNTVGDSANESRDRHM CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE SVEISTACAEYNDIRFTFIDCPGSVEFTQETYNALMGVDAAIVVCEPIRERVLTLAPLFK EEEEHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHH FLDDWEIPHLVFVNKMDRANIHVLETLHALKAVSSRPLVAHQYPIMQREVGAAASADPNF HHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCCCCCC GGEQLTGFIDMVSEQAYQYHPGAPADPIPFPEHLKQEEHTARAEMLEALANFDDHLLEEL CHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LEDIEPPAEEILKDLKMELGADLVVPVFFGVAEQDYGVRPLLEALLREAPEPETTAARRL HHHCCCCHHHHHHHHHHHHCCCEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH KGKVSHTPIAQVLKTYYTPQGGKLSLVRVWQGKLTDGIILNGVRAGGIYRLMGQQQQSVN HCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHCCHHHHHH EVGAGEIVALSRLEGIKTGDTISTEQPTQLPKAQQLEPVYALAITPEKRNDEVKLSNAIT HCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHH KLLEEDPSLAWEQHGDTHEVILWGQGEIHLQVALDRLRRKYNLPMSTHLPQVPYKETIRK HHHHCCCCCHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHH PVTSVHGRYKHQSGGHGQFGDVFLDIKPLPRGEGFNFKESIVGGVVPRQYIPGVEMGVRE HHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCHHHCCCHHHHHHH FLVHGPLGFPVVDVAVTLTNGSYHTVDSSEQAFKQAARLAMQTGIPQAQPTLLEPILRVE HHHHCCCCCCEEEEEEEEECCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEE VTTPSEFTSKVLQLLSGRRGQILGYEGRQDWQGWDNISAYLPQAEMQNFIVELRSLTLGV ECCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCC GSFHWAYDHLQEVPEKLAERVLASNGNGSNGNGK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]