| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is fus [H]
Identifier: 17231830
GI number: 17231830
Start: 5191693
End: 5193771
Strand: Reverse
Name: fus [H]
Synonym: all4338
Alternate gene names: 17231830
Gene position: 5193771-5191693 (Counterclockwise)
Preceding gene: 17231831
Following gene: 17231829
Centisome position: 80.98
GC content: 46.46
Gene sequence:
>2079_bases GTGGCACGTATAAACCCGCTAGAGAAAGTACGCAATATCGGTATTGCGGCGCATATAGATGCGGGCAAAACCACGACAAC AGAGAGAATATTATTTTACTCTGGAATAATTCATAAAATTGGTGAGGTTCACGAAGGAACTGCTGTAACCGACTGGATGG ATCAAGAGCGGGAGCGGGGAATTACCATCACTGCTGCGGCAATTAGTACCAGTTGGAAAGATTATCAAATTAACATTATC GATACTCCAGGTCACGTAGACTTCACAATTGAAGTTGAACGCTCCATGCGGGTGTTAGATGGTGTAATTGCGGTATTTTG TTCCGTGGGTGGTGTACAACCCCAATCAGAAACTGTGTGGCGGCAAGCAGACCGTTACAAAGTACCTCGGATTGCCTTCA TCAACAAGATGGATCGTACAGGAGCGAACTTTTACAGAGTTCATGAGCAAATGCGCGATCGCTTGCGGGCAAATGCCATT GCCATCCAATTGCCTATTGGTAGCGAAAACGACTTCAAAGGCATTGTAGACTTGGTGCGGAAACGTGCATATATGTACAA CAACGACCAAGGTACAGATATCGAAGAAACTGATATCCCAGCAGACTTACAAGATCAAGTCGAAGAGTACTACACCAAGC TGGTAGAAGCAGTCGCAGAAACCGATGACGATCTGATGTCCAAGTACTTCGATGGCGAACCACTGACAGAAGAAGAAATT CGGTCTGCCCTACGGAAAGGTACAATTGCCGGTACAATCGTACCCGTGCTTTGTGGTTCCGCTTTTAAAAACAAAGGTGT GCAGTTAATGCTGGATGCAGTGGTAGATTACCTACCCGCACCCACAGAAGTACCCCCCATACAAGGTACACTTCCCAACG GCGATGCTATAGAGCGTCGGGCTGACGATAACGAACCGTTAGCAGCTCTGGCCTTCAAGATTATGGCTGACCCTTATGGT CGCCTCACCTTTGTTCGCGTTTATTCTGGCGTTCTGAAAAAAGGTAGCTACGTATTAAATGCTACCAAGAACAAAAAAGA ACGGATCTCCCGTTTAGTTCTTATGAAAGCAGATGACCGGCAAGACGTAGAAGAACTACGTGCAGGTGATTTGGGGGCTG CACTAGGATTAAAAGACACCTTGACTGGTGATACTATCACTGATGAAGGCGCACCAGTAATTCTGGAATCCCTATTTATT CCAGAGCCTGTGATCTCGGTAGCGGTTGAACCCAAAACCAAGAACGACATGGATAAATTATCCAAGGCTCTGCAATCTCT CTCAGAAGAAGACCCAACCTTCCGCGTCAACGTTGACCCAGAAACCAACCAAACTGTAATTGCAGGGATGGGAGAACTCC ACCTAGAAATTCTCGTAGACCGGATGTTGCGTGAATTCAAAGTGGAAGCCAATGTTGGTGCGCCACAAGTAGCTTACCGC GAAACGATTCGTAAACCAGTTACTAACGTGGAAGGTAAGTTCATCCGTCAAAGTGGTGGTAAAGGTCAATATGGTCACGT TGTGATCAATTTGGAACCAGGAGAACCCGGTACTGGCTTTGAATTCGTCTCTAAAATTGTCGGTGGTGTAGTACCTAAAG AGTACATAGGCCCTGCCGAGCAAGGTATGAAAGAAAGCTGTGAATCTGGTATTTTAGCTGGATATCCACTAATTGACGTG AAAGCAACGCTAGTTCATGGCTCTTACCACGATGTAGACTCTTCGGAAATGGCTTTCAAAATTGCTGGATCAATGGCGCT GAAAGAAGCTGTGCTTAAAGCTTCACCAGTACTGTTAGAGCCTATGATGAAAGTCGAAGTGGAAGTTCCTGAAGACTATA TTGGGAACGTCATTGGCGACCTCATCTCCCGTCGGGGACAGATAGAAAGCCAAAGCACTGAACAGGGACTCGCTAAAGTG GCATCAAAAGTTCCACTAGCGACTATGTTCGGCTACGCCACTGATATCCGGTCGAAAACCCAAGGTCGGGGTATCTTTAC GATGGAGTTCAGCCACTACGAAGAGGTGCCTCGCAGCGTAGCTGAAACTATCATTGCAAAAAGCAAAGGGAACGCTTAA
Upstream 100 bases:
>100_bases GCGGAATTACCGTACACCAGTCGGTTTTCCCTAAAAGTATAGAATCTTAACAAAGAGTAATATACAAGATATCATGAGGC AAAAACTATAGGAGGTTATT
Downstream 100 bases:
>100_bases TTAAAAAAGGAAACGAGGATTCATGGCACGCGCAAAGTTTGAAAGAACGAAACCCCACGTAAATATCGGTACGATTGGCC ACGTTGACCACGGTAAAACA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MARINPLEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAVTDWMDQERERGITITAAAISTSWKDYQINII DTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRIAFINKMDRTGANFYRVHEQMRDRLRANAI AIQLPIGSENDFKGIVDLVRKRAYMYNNDQGTDIEETDIPADLQDQVEEYYTKLVEAVAETDDDLMSKYFDGEPLTEEEI RSALRKGTIAGTIVPVLCGSAFKNKGVQLMLDAVVDYLPAPTEVPPIQGTLPNGDAIERRADDNEPLAALAFKIMADPYG RLTFVRVYSGVLKKGSYVLNATKNKKERISRLVLMKADDRQDVEELRAGDLGAALGLKDTLTGDTITDEGAPVILESLFI PEPVISVAVEPKTKNDMDKLSKALQSLSEEDPTFRVNVDPETNQTVIAGMGELHLEILVDRMLREFKVEANVGAPQVAYR ETIRKPVTNVEGKFIRQSGGKGQYGHVVINLEPGEPGTGFEFVSKIVGGVVPKEYIGPAEQGMKESCESGILAGYPLIDV KATLVHGSYHDVDSSEMAFKIAGSMALKEAVLKASPVLLEPMMKVEVEVPEDYIGNVIGDLISRRGQIESQSTEQGLAKV ASKVPLATMFGYATDIRSKTQGRGIFTMEFSHYEEVPRSVAETIIAKSKGNA
Sequences:
>Translated_692_residues MARINPLEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAVTDWMDQERERGITITAAAISTSWKDYQINII DTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRIAFINKMDRTGANFYRVHEQMRDRLRANAI AIQLPIGSENDFKGIVDLVRKRAYMYNNDQGTDIEETDIPADLQDQVEEYYTKLVEAVAETDDDLMSKYFDGEPLTEEEI RSALRKGTIAGTIVPVLCGSAFKNKGVQLMLDAVVDYLPAPTEVPPIQGTLPNGDAIERRADDNEPLAALAFKIMADPYG RLTFVRVYSGVLKKGSYVLNATKNKKERISRLVLMKADDRQDVEELRAGDLGAALGLKDTLTGDTITDEGAPVILESLFI PEPVISVAVEPKTKNDMDKLSKALQSLSEEDPTFRVNVDPETNQTVIAGMGELHLEILVDRMLREFKVEANVGAPQVAYR ETIRKPVTNVEGKFIRQSGGKGQYGHVVINLEPGEPGTGFEFVSKIVGGVVPKEYIGPAEQGMKESCESGILAGYPLIDV KATLVHGSYHDVDSSEMAFKIAGSMALKEAVLKASPVLLEPMMKVEVEVPEDYIGNVIGDLISRRGQIESQSTEQGLAKV ASKVPLATMFGYATDIRSKTQGRGIFTMEFSHYEEVPRSVAETIIAKSKGNA >Mature_691_residues ARINPLEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAVTDWMDQERERGITITAAAISTSWKDYQINIID TPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRIAFINKMDRTGANFYRVHEQMRDRLRANAIA IQLPIGSENDFKGIVDLVRKRAYMYNNDQGTDIEETDIPADLQDQVEEYYTKLVEAVAETDDDLMSKYFDGEPLTEEEIR SALRKGTIAGTIVPVLCGSAFKNKGVQLMLDAVVDYLPAPTEVPPIQGTLPNGDAIERRADDNEPLAALAFKIMADPYGR LTFVRVYSGVLKKGSYVLNATKNKKERISRLVLMKADDRQDVEELRAGDLGAALGLKDTLTGDTITDEGAPVILESLFIP EPVISVAVEPKTKNDMDKLSKALQSLSEEDPTFRVNVDPETNQTVIAGMGELHLEILVDRMLREFKVEANVGAPQVAYRE TIRKPVTNVEGKFIRQSGGKGQYGHVVINLEPGEPGTGFEFVSKIVGGVVPKEYIGPAEQGMKESCESGILAGYPLIDVK ATLVHGSYHDVDSSEMAFKIAGSMALKEAVLKASPVLLEPMMKVEVEVPEDYIGNVIGDLISRRGQIESQSTEQGLAKVA SKVPLATMFGYATDIRSKTQGRGIFTMEFSHYEEVPRSVAETIIAKSKGNA
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=695, Percent_Identity=45.6115107913669, Blast_Score=599, Evalue=1e-171, Organism=Homo sapiens, GI19923640, Length=731, Percent_Identity=41.7236662106703, Blast_Score=506, Evalue=1e-143, Organism=Homo sapiens, GI25306287, Length=706, Percent_Identity=38.8101983002833, Blast_Score=437, Evalue=1e-122, Organism=Homo sapiens, GI25306283, Length=445, Percent_Identity=45.3932584269663, Blast_Score=352, Evalue=9e-97, Organism=Homo sapiens, GI4503483, Length=489, Percent_Identity=25.3578732106339, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI157426893, Length=155, Percent_Identity=39.3548387096774, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI94966754, Length=134, Percent_Identity=40.2985074626866, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI310132016, Length=119, Percent_Identity=40.3361344537815, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI310110807, Length=119, Percent_Identity=40.3361344537815, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI310123363, Length=119, Percent_Identity=40.3361344537815, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI94966752, Length=229, Percent_Identity=26.6375545851528, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI217272894, Length=142, Percent_Identity=30.2816901408451, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI217272892, Length=142, Percent_Identity=30.2816901408451, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789738, Length=699, Percent_Identity=60.0858369098712, Blast_Score=859, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=491, Percent_Identity=30.9572301425662, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI48994988, Length=175, Percent_Identity=42.2857142857143, Blast_Score=122, Evalue=9e-29, Organism=Escherichia coli, GI1788922, Length=152, Percent_Identity=37.5, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17533571, Length=687, Percent_Identity=42.5036390101892, Blast_Score=539, Evalue=1e-153, Organism=Caenorhabditis elegans, GI17556745, Length=708, Percent_Identity=29.8022598870057, Blast_Score=337, Evalue=1e-92, Organism=Caenorhabditis elegans, GI17506493, Length=484, Percent_Identity=25.6198347107438, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17557151, Length=152, Percent_Identity=38.1578947368421, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71988819, Length=138, Percent_Identity=32.6086956521739, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71988811, Length=138, Percent_Identity=32.6086956521739, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17552882, Length=141, Percent_Identity=31.9148936170213, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323098, Length=695, Percent_Identity=44.7482014388489, Blast_Score=592, Evalue=1e-170, Organism=Saccharomyces cerevisiae, GI6322359, Length=792, Percent_Identity=32.4494949494949, Blast_Score=382, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6324707, Length=154, Percent_Identity=38.961038961039, Blast_Score=97, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6320593, Length=154, Percent_Identity=38.961038961039, Blast_Score=97, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6323320, Length=202, Percent_Identity=35.6435643564356, Blast_Score=95, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6324166, Length=146, Percent_Identity=35.6164383561644, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24582462, Length=696, Percent_Identity=46.551724137931, Blast_Score=615, Evalue=1e-176, Organism=Drosophila melanogaster, GI221458488, Length=720, Percent_Identity=33.4722222222222, Blast_Score=360, Evalue=1e-99, Organism=Drosophila melanogaster, GI24585709, Length=821, Percent_Identity=25.3349573690621, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI24585711, Length=821, Percent_Identity=25.3349573690621, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24585713, Length=821, Percent_Identity=25.3349573690621, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI78706572, Length=142, Percent_Identity=39.4366197183099, Blast_Score=103, Evalue=5e-22, Organism=Drosophila melanogaster, GI28574573, Length=141, Percent_Identity=38.2978723404255, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI21357743, Length=137, Percent_Identity=32.1167883211679, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76146; Mature: 76015
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARINPLEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAVTDWMDQERERG CCCCCHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ITITAAAISTSWKDYQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVW EEEEEEEEECCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RQADRYKVPRIAFINKMDRTGANFYRVHEQMRDRLRANAIAIQLPIGSENDFKGIVDLVR HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHH KRAYMYNNDQGTDIEETDIPADLQDQVEEYYTKLVEAVAETDDDLMSKYFDGEPLTEEEI HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHH RSALRKGTIAGTIVPVLCGSAFKNKGVQLMLDAVVDYLPAPTEVPPIQGTLPNGDAIERR HHHHHHCCHHHHHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC ADDNEPLAALAFKIMADPYGRLTFVRVYSGVLKKGSYVLNATKNKKERISRLVLMKADDR CCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCEEEECCCCHHHHHHHEEEEECCCH QDVEELRAGDLGAALGLKDTLTGDTITDEGAPVILESLFIPEPVISVAVEPKTKNDMDKL HHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHEEEECCCCCCHHHHH SKALQSLSEEDPTFRVNVDPETNQTVIAGMGELHLEILVDRMLREFKVEANVGAPQVAYR HHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ETIRKPVTNVEGKFIRQSGGKGQYGHVVINLEPGEPGTGFEFVSKIVGGVVPKEYIGPAE HHHHHHHCCCCCHHEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCHHHCCCHH QGMKESCESGILAGYPLIDVKATLVHGSYHDVDSSEMAFKIAGSMALKEAVLKASPVLLE HHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHC PMMKVEVEVPEDYIGNVIGDLISRRGQIESQSTEQGLAKVASKVPLATMFGYATDIRSKT CCCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC QGRGIFTMEFSHYEEVPRSVAETIIAKSKGNA CCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARINPLEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAVTDWMDQERERG CCCCHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ITITAAAISTSWKDYQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVW EEEEEEEEECCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RQADRYKVPRIAFINKMDRTGANFYRVHEQMRDRLRANAIAIQLPIGSENDFKGIVDLVR HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHH KRAYMYNNDQGTDIEETDIPADLQDQVEEYYTKLVEAVAETDDDLMSKYFDGEPLTEEEI HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHH RSALRKGTIAGTIVPVLCGSAFKNKGVQLMLDAVVDYLPAPTEVPPIQGTLPNGDAIERR HHHHHHCCHHHHHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC ADDNEPLAALAFKIMADPYGRLTFVRVYSGVLKKGSYVLNATKNKKERISRLVLMKADDR CCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCEEEECCCCHHHHHHHEEEEECCCH QDVEELRAGDLGAALGLKDTLTGDTITDEGAPVILESLFIPEPVISVAVEPKTKNDMDKL HHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHEEEECCCCCCHHHHH SKALQSLSEEDPTFRVNVDPETNQTVIAGMGELHLEILVDRMLREFKVEANVGAPQVAYR HHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ETIRKPVTNVEGKFIRQSGGKGQYGHVVINLEPGEPGTGFEFVSKIVGGVVPKEYIGPAE HHHHHHHCCCCCHHEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCHHHCCCHH QGMKESCESGILAGYPLIDVKATLVHGSYHDVDSSEMAFKIAGSMALKEAVLKASPVLLE HHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHC PMMKVEVEVPEDYIGNVIGDLISRRGQIESQSTEQGLAKVASKVPLATMFGYATDIRSKT CCCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC QGRGIFTMEFSHYEEVPRSVAETIIAKSKGNA CCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA