Click here to switch to the map view.

The map label for this gene is 17231825

Identifier: 17231825

GI number: 17231825

Start: 5187132

End: 5187719

Strand: Reverse

Name: 17231825

Synonym: all4333

Alternate gene names: NA

Gene position: 5187719-5187132 (Counterclockwise)

Preceding gene: 17231827

Following gene: 17231820

Centisome position: 80.88

GC content: 40.14

Gene sequence:

>588_bases
ATGGCTACCAAGTTCACTGCCTCACAATCGGTAGAAATTGCTGTACCGCAGCAGCCTATTCCTATTCAGCACTACTTGCG
TCAGCCCCAACGTCTAGTTAATGCTTTGGTAGATCAAAGGCGTATTCAGCAACTTTCTGAGGAAATATTTCGTCTGAAAA
TGCGCCCTTTAAATTTCATGTCCTTGAGTATTCAACCTACTGTAGATATGAGAGTTTGGGCAGAATCTAACGGAACAATT
TATCTGCGTTCAGTAGGTTGCGAAATTCTTGGTTTTGAGTACATTAACCAGCGCTTCTCCCTCAATCTAAGAGGGTATTT
ATCGCCATATCAATTAAATAGTGCTACTCGCCTAGAAGGTAGGGCTGATTTACAAGTGCAGGTAGATTTACCACCTCCTT
TTTCTCTAACACCCAGACCGATTTTAGAGACTACTGGTAATGGTTTACTCAAAAGTGTCTTATTGACAGTAAAGCAAAGA
TTGTTGCACCAACTATTAGTGGACTATCGTCAATGGGTAATTTCCCAAACTCAAGAACAAGCTTTAGCTAACAATGATCC
TCAATTGCCAATTTTCAATATAGAGTAA

Upstream 100 bases:

>100_bases
CATCAACTACTTTGATTGAATAGTTTTTTCCATAATAAAATCTATCGAGTCATAAACTAATTAATAATAACAATATTAAA
ACAATTACTTCCCGTAACTC

Downstream 100 bases:

>100_bases
TATGTTCATTTTTCTGTAGCAGAAAACAAATGCTACTTCTTTTCTGTTGAAAGAAAAGAACAGTTTAATTACGAATTAAC
TAGTCAGGTGATATTTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MATKFTASQSVEIAVPQQPIPIQHYLRQPQRLVNALVDQRRIQQLSEEIFRLKMRPLNFMSLSIQPTVDMRVWAESNGTI
YLRSVGCEILGFEYINQRFSLNLRGYLSPYQLNSATRLEGRADLQVQVDLPPPFSLTPRPILETTGNGLLKSVLLTVKQR
LLHQLLVDYRQWVISQTQEQALANNDPQLPIFNIE

Sequences:

>Translated_195_residues
MATKFTASQSVEIAVPQQPIPIQHYLRQPQRLVNALVDQRRIQQLSEEIFRLKMRPLNFMSLSIQPTVDMRVWAESNGTI
YLRSVGCEILGFEYINQRFSLNLRGYLSPYQLNSATRLEGRADLQVQVDLPPPFSLTPRPILETTGNGLLKSVLLTVKQR
LLHQLLVDYRQWVISQTQEQALANNDPQLPIFNIE
>Mature_194_residues
ATKFTASQSVEIAVPQQPIPIQHYLRQPQRLVNALVDQRRIQQLSEEIFRLKMRPLNFMSLSIQPTVDMRVWAESNGTIY
LRSVGCEILGFEYINQRFSLNLRGYLSPYQLNSATRLEGRADLQVQVDLPPPFSLTPRPILETTGNGLLKSVLLTVKQRL
LHQLLVDYRQWVISQTQEQALANNDPQLPIFNIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018971 [H]

Pfam domain/function: PF09366 DUF1997 [H]

EC number: NA

Molecular weight: Translated: 22441; Mature: 22310

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKFTASQSVEIAVPQQPIPIQHYLRQPQRLVNALVDQRRIQQLSEEIFRLKMRPLNFM
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
SLSIQPTVDMRVWAESNGTIYLRSVGCEILGFEYINQRFSLNLRGYLSPYQLNSATRLEG
EEEECCCEEEEEEECCCCEEEEEECCCEEECHHHHHHEEEEEECCCCCCEECCCCCCCCC
RADLQVQVDLPPPFSLTPRPILETTGNGLLKSVLLTVKQRLLHQLLVDYRQWVISQTQEQ
CCCEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALANNDPQLPIFNIE
HHCCCCCCCEEEECC
>Mature Secondary Structure 
ATKFTASQSVEIAVPQQPIPIQHYLRQPQRLVNALVDQRRIQQLSEEIFRLKMRPLNFM
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
SLSIQPTVDMRVWAESNGTIYLRSVGCEILGFEYINQRFSLNLRGYLSPYQLNSATRLEG
EEEECCCEEEEEEECCCCEEEEEECCCEEECHHHHHHEEEEEECCCCCCEECCCCCCCCC
RADLQVQVDLPPPFSLTPRPILETTGNGLLKSVLLTVKQRLLHQLLVDYRQWVISQTQEQ
CCCEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALANNDPQLPIFNIE
HHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1551590 [H]