| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231792
Identifier: 17231792
GI number: 17231792
Start: 5156723
End: 5157406
Strand: Reverse
Name: 17231792
Synonym: all4300
Alternate gene names: NA
Gene position: 5157406-5156723 (Counterclockwise)
Preceding gene: 17231795
Following gene: 17231791
Centisome position: 80.41
GC content: 40.5
Gene sequence:
>684_bases ATGGTATCAAAAATCACTAGCTTCCAATGCGGAGAAACTCAAGCTAAAACTCGGCTCCTATTAGCTTTGTGGGATTTGGG AGGAACGCAGCAGGAAATTAAGAAAGGACTACTTACAAAACGAATTTTAACTAAAGGCAAGAAGGCAGCAGATTATCACA GTTTATTTGAAGACTTGCAAAACCACGGAGTAATCGCAGGCTCTAAACAAGGATACTTTTTGACATCTCCTAAGGGTTTA GAGGTATTGGGCGAGGGTTTAAGAACTGGTAATTTCCAATTTGAAGGAACTATTGTCGGAACTTGGGCGGCGAATGCTCT ATTGAAATGGATTAGTCAGATAAATGTTTCTGTGACTGAACAAGCTAAATCAGTCAACGGCGTGAAGAGTGCAACGGGCT ACGCATCCTATGACGAGTTTAAATCAACTGTACTGGAAGTCTACGACAAGTTGAACTATGAATACAACTTCAATCATCTA GTACCGATTTATCGGATTAGGAGAGAAATAGGCGATCGTTTAAATCGTACTCAATTTAATGATTGGCTGCTAGAAATGCA GGCTGACGATATTTTACAACTACAAGGCGGAAGTGTAGAAGATAGCGCGCCTGACAAGATAGAAGATTCCATCACTACGG TATTAGATGGATTACGCTGCTACGCCAAATTGTTAAAAGTCTGA
Upstream 100 bases:
>100_bases TTGACAATATGGGAAATTAGTATATTTCTTTCCGCAGTTTCACGGCGCTTTTTCCGTAGTTAGCAAAACTATACTAGTTC TATTTGGCAGAACTAATTTT
Downstream 100 bases:
>100_bases TTTTTGCTTACTCACTCTTAAATGTATAACACCATGATTGCTACTACATCTACCATTGATGAACTCATTAGAAATCAAAA CCCTTTTGCTGGACATATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MVSKITSFQCGETQAKTRLLLALWDLGGTQQEIKKGLLTKRILTKGKKAADYHSLFEDLQNHGVIAGSKQGYFLTSPKGL EVLGEGLRTGNFQFEGTIVGTWAANALLKWISQINVSVTEQAKSVNGVKSATGYASYDEFKSTVLEVYDKLNYEYNFNHL VPIYRIRREIGDRLNRTQFNDWLLEMQADDILQLQGGSVEDSAPDKIEDSITTVLDGLRCYAKLLKV
Sequences:
>Translated_227_residues MVSKITSFQCGETQAKTRLLLALWDLGGTQQEIKKGLLTKRILTKGKKAADYHSLFEDLQNHGVIAGSKQGYFLTSPKGL EVLGEGLRTGNFQFEGTIVGTWAANALLKWISQINVSVTEQAKSVNGVKSATGYASYDEFKSTVLEVYDKLNYEYNFNHL VPIYRIRREIGDRLNRTQFNDWLLEMQADDILQLQGGSVEDSAPDKIEDSITTVLDGLRCYAKLLKV >Mature_227_residues MVSKITSFQCGETQAKTRLLLALWDLGGTQQEIKKGLLTKRILTKGKKAADYHSLFEDLQNHGVIAGSKQGYFLTSPKGL EVLGEGLRTGNFQFEGTIVGTWAANALLKWISQINVSVTEQAKSVNGVKSATGYASYDEFKSTVLEVYDKLNYEYNFNHL VPIYRIRREIGDRLNRTQFNDWLLEMQADDILQLQGGSVEDSAPDKIEDSITTVLDGLRCYAKLLKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25404; Mature: 25404
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSKITSFQCGETQAKTRLLLALWDLGGTQQEIKKGLLTKRILTKGKKAADYHSLFEDLQ CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NHGVIAGSKQGYFLTSPKGLEVLGEGLRTGNFQFEGTIVGTWAANALLKWISQINVSVTE HCCEEEECCCCEEEECCCCHHHHHCCHHCCCEEEEEEEEEHHHHHHHHHHHHHCCCHHHH QAKSVNGVKSATGYASYDEFKSTVLEVYDKLNYEYNFNHLVPIYRIRREIGDRLNRTQFN HHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH DWLLEMQADDILQLQGGSVEDSAPDKIEDSITTVLDGLRCYAKLLKV HHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSKITSFQCGETQAKTRLLLALWDLGGTQQEIKKGLLTKRILTKGKKAADYHSLFEDLQ CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NHGVIAGSKQGYFLTSPKGLEVLGEGLRTGNFQFEGTIVGTWAANALLKWISQINVSVTE HCCEEEECCCCEEEECCCCHHHHHCCHHCCCEEEEEEEEEHHHHHHHHHHHHHCCCHHHH QAKSVNGVKSATGYASYDEFKSTVLEVYDKLNYEYNFNHLVPIYRIRREIGDRLNRTQFN HHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH DWLLEMQADDILQLQGGSVEDSAPDKIEDSITTVLDGLRCYAKLLKV HHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA