Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17231634

Identifier: 17231634

GI number: 17231634

Start: 4987813

End: 4988382

Strand: Reverse

Name: 17231634

Synonym: all4142

Alternate gene names: NA

Gene position: 4988382-4987813 (Counterclockwise)

Preceding gene: 17231635

Following gene: 17231632

Centisome position: 77.78

GC content: 35.96

Gene sequence:

>570_bases
ATGACGCTATCAACTCAAGTATTTTTTCACCCGTCTTTGGATGAGTTTCTCAAATTACCAGAAACCAAACCAGCTAGTGA
ATATATCGATGGACGCATCTATCAAAAACCAATGCCCCAAGGAAAACATAGTATTCTTCAAACTCGTTTATCAAGCAATA
TTAATCAGGTAGGTGAACCTCAGAAAAAAGCTTTAGCATTAACCGAGTTACGCTGCACATTTGAGGGGCGTTCCTTAGTT
CCCGATGTCGCTGTATTTGAGTGGTCACGTATCCCAACTGATGCAGATGGAGAGATTGCCAATAGGTTTGAAAGTTACCC
AGATTGGATTATTGAGATTTTATCACCTGATCAATCGCCTAACCGAGTAATTAATAAGATTATTTTTTGTATTAACCAAG
GAACTAAATTAGGTTGGTTTATTGATGCTAATGATAAATCTGTGATGGTATTTCAACCAGATAAACTACCAGAAGTAAAG
TATGATAATGATATTTTACCTGTCCTTGATGTGTTAGAAAATTGGCAGATAAAAGCGGCAGATATTTTTAGTTGGTTGAA
AGTTAAATAA

Upstream 100 bases:

>100_bases
CAATTACCCAATATCCAGCCACAGCAATCTTGAGTGGTGAAGATGTTGTACCTGGTTTTACATTGGCTTTAGCAAAATTA
TTGTAAGGAAATTATTGCTG

Downstream 100 bases:

>100_bases
TTAAAGATTAATCTAATATTGAAATTCTCGCGGTTTTACTCCATGATTTCATTTTATAGTAGAGGGGATCGCTTTTTTAG
TAGTCTTTATATCAAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTLSTQVFFHPSLDEFLKLPETKPASEYIDGRIYQKPMPQGKHSILQTRLSSNINQVGEPQKKALALTELRCTFEGRSLV
PDVAVFEWSRIPTDADGEIANRFESYPDWIIEILSPDQSPNRVINKIIFCINQGTKLGWFIDANDKSVMVFQPDKLPEVK
YDNDILPVLDVLENWQIKAADIFSWLKVK

Sequences:

>Translated_189_residues
MTLSTQVFFHPSLDEFLKLPETKPASEYIDGRIYQKPMPQGKHSILQTRLSSNINQVGEPQKKALALTELRCTFEGRSLV
PDVAVFEWSRIPTDADGEIANRFESYPDWIIEILSPDQSPNRVINKIIFCINQGTKLGWFIDANDKSVMVFQPDKLPEVK
YDNDILPVLDVLENWQIKAADIFSWLKVK
>Mature_188_residues
TLSTQVFFHPSLDEFLKLPETKPASEYIDGRIYQKPMPQGKHSILQTRLSSNINQVGEPQKKALALTELRCTFEGRSLVP
DVAVFEWSRIPTDADGEIANRFESYPDWIIEILSPDQSPNRVINKIIFCINQGTKLGWFIDANDKSVMVFQPDKLPEVKY
DNDILPVLDVLENWQIKAADIFSWLKVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21681; Mature: 21550

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSTQVFFHPSLDEFLKLPETKPASEYIDGRIYQKPMPQGKHSILQTRLSSNINQVGEP
CCCCCEEEECCCHHHHHCCCCCCCHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCC
QKKALALTELRCTFEGRSLVPDVAVFEWSRIPTDADGEIANRFESYPDWIIEILSPDQSP
HHHHHHHHHEEEEECCCCCCCCHHEEECCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCH
NRVINKIIFCINQGTKLGWFIDANDKSVMVFQPDKLPEVKYDNDILPVLDVLENWQIKAA
HHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEHH
DIFSWLKVK
HHHHHHHCC
>Mature Secondary Structure 
TLSTQVFFHPSLDEFLKLPETKPASEYIDGRIYQKPMPQGKHSILQTRLSSNINQVGEP
CCCCEEEECCCHHHHHCCCCCCCHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHCCCC
QKKALALTELRCTFEGRSLVPDVAVFEWSRIPTDADGEIANRFESYPDWIIEILSPDQSP
HHHHHHHHHEEEEECCCCCCCCHHEEECCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCH
NRVINKIIFCINQGTKLGWFIDANDKSVMVFQPDKLPEVKYDNDILPVLDVLENWQIKAA
HHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEHH
DIFSWLKVK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA