| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is chaB [C]
Identifier: 17231585
GI number: 17231585
Start: 4931477
End: 4931722
Strand: Direct
Name: chaB [C]
Synonym: asr4093
Alternate gene names: 17231585
Gene position: 4931477-4931722 (Clockwise)
Preceding gene: 17231580
Following gene: 17231586
Centisome position: 76.89
GC content: 40.24
Gene sequence:
>246_bases ATGCCTTATCAACAAATAAGTGAATTACCTCAAGAGATTAGAGAACAATTACCAGAACACGCTCAACAGATTTTCTTTGC AGCTTTCAATGCAGCTCAAAGTGACGGCTTGAGTGAAGAAGGTGCAGTTGATGTTGCTTGGAATAGTGTGAGAAACGAGT ACAAACAAGACAACGATGGTCAATGGCAACGAAAAGCCGAAGACTCAGCAATACATCATAAAGCTATCACAACAGGTGGT AACTAA
Upstream 100 bases:
>100_bases TCTAAAGGAGGGTATTTTACATCTCTACTTACAGAAAGAGGCAAAATTACTGACCGATATTTTAACATAAACCAAAGTTA GATTGATGGGAGTGAAATGG
Downstream 100 bases:
>100_bases ACATAATCTGTAATTTCTGATAGTCTGCTGCTAGGCTAACGCCTATGTAGGTTTCTCTGTTGCTTTTTGTAGCAAAGACC AAAACCAACGTAATTCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MPYQQISELPQEIREQLPEHAQQIFFAAFNAAQSDGLSEEGAVDVAWNSVRNEYKQDNDGQWQRKAEDSAIHHKAITTGG N
Sequences:
>Translated_81_residues MPYQQISELPQEIREQLPEHAQQIFFAAFNAAQSDGLSEEGAVDVAWNSVRNEYKQDNDGQWQRKAEDSAIHHKAITTGG N >Mature_80_residues PYQQISELPQEIREQLPEHAQQIFFAAFNAAQSDGLSEEGAVDVAWNSVRNEYKQDNDGQWQRKAEDSAIHHKAITTGGN
Specific function: Unknown
COG id: COG4572
COG function: function code R; Putative cation transport regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787469, Length=76, Percent_Identity=38.1578947368421, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9142; Mature: 9011
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYQQISELPQEIREQLPEHAQQIFFAAFNAAQSDGLSEEGAVDVAWNSVRNEYKQDNDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC QWQRKAEDSAIHHKAITTGGN CHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PYQQISELPQEIREQLPEHAQQIFFAAFNAAQSDGLSEEGAVDVAWNSVRNEYKQDNDG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC QWQRKAEDSAIHHKAITTGGN CHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA