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The map label for this gene is 17231562

Identifier: 17231562

GI number: 17231562

Start: 4898221

End: 4898931

Strand: Reverse

Name: 17231562

Synonym: all4070

Alternate gene names: NA

Gene position: 4898931-4898221 (Counterclockwise)

Preceding gene: 17231563

Following gene: 17231555

Centisome position: 76.38

GC content: 42.9

Gene sequence:

>711_bases
GTGATGTCTAAGGCAATTATGAGTAACAACATCCAGGGGTGCAAACAATTATTTGGCGCTAGCTTGTGTACCGCCATTAC
TTTAATCACAAGTAGTAGTATTGCGGCTCAGGTACAGATGGCAAAACTGAATAATTGGCGCTTTTACCCAGACACAAAAA
AGCTAGAAATAACCCTTTCATCCAGTAAAACACCACAGTACTTTTATTTAAACGAACCACCAAGACTAGTTGTAGATATT
CCTGATACTCTATTAGGCAAGGTTTCCACCCAGCAAAACTACACCGGTTCCGTTCAAAGAGTCCGTGTTTCCCAATTAAG
CGCTAATGTTACTCGCATTGTCTTAGATTTAGCCCCAGGGTCTACTGTAGACGCAAACAAAGTACAACTACAACCTGCTA
CTCGACAAAACCCTACTCGCTGGGTTTTACGTCCCGCAATTGTGAAAGTGGCTAAACAATCAAGCAACTTCCAACAGTCA
CCTAAAAGTCAACAACCAACAACCCCCTCCTATATACAATTACCTAGTACCCTACCTCCCATAACTGGTCTGCAACAGCA
ACCGTTTGTGAGTGTACCGCCCCTGAACTCTAATAATCCCACTTTGAAACCCAGCAATTTTAACAACACTAATTCTTCCA
CTCCTCCAGTCCCTACCCTACCCAACTATCCAGTGATTGAGTTTGGTCAACCTCTACCTAAATTCCGTTGA

Upstream 100 bases:

>100_bases
GGAAAATTCTCGTAGCCATTAGCATAGCAAATAATGTCTCAGAATCAATGGGTGATCAATGATTTCCCGGACTGATGGCT
GAACATACAAGGGATAAATA

Downstream 100 bases:

>100_bases
AGATGTGATTGGTCATGGGGATTGAGAGTTAGCAAACAAAATAATTATTTCTCACGATTACCTATGACCAATTACCAATT
CCCATAGATATAATGAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Wall Hydrolase/Autolysin; N-Acetylmuramoyl-L-Alanine Amidase Domain Protein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MMSKAIMSNNIQGCKQLFGASLCTAITLITSSSIAAQVQMAKLNNWRFYPDTKKLEITLSSSKTPQYFYLNEPPRLVVDI
PDTLLGKVSTQQNYTGSVQRVRVSQLSANVTRIVLDLAPGSTVDANKVQLQPATRQNPTRWVLRPAIVKVAKQSSNFQQS
PKSQQPTTPSYIQLPSTLPPITGLQQQPFVSVPPLNSNNPTLKPSNFNNTNSSTPPVPTLPNYPVIEFGQPLPKFR

Sequences:

>Translated_236_residues
MMSKAIMSNNIQGCKQLFGASLCTAITLITSSSIAAQVQMAKLNNWRFYPDTKKLEITLSSSKTPQYFYLNEPPRLVVDI
PDTLLGKVSTQQNYTGSVQRVRVSQLSANVTRIVLDLAPGSTVDANKVQLQPATRQNPTRWVLRPAIVKVAKQSSNFQQS
PKSQQPTTPSYIQLPSTLPPITGLQQQPFVSVPPLNSNNPTLKPSNFNNTNSSTPPVPTLPNYPVIEFGQPLPKFR
>Mature_236_residues
MMSKAIMSNNIQGCKQLFGASLCTAITLITSSSIAAQVQMAKLNNWRFYPDTKKLEITLSSSKTPQYFYLNEPPRLVVDI
PDTLLGKVSTQQNYTGSVQRVRVSQLSANVTRIVLDLAPGSTVDANKVQLQPATRQNPTRWVLRPAIVKVAKQSSNFQQS
PKSQQPTTPSYIQLPSTLPPITGLQQQPFVSVPPLNSNNPTLKPSNFNNTNSSTPPVPTLPNYPVIEFGQPLPKFR

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.1.28

Molecular weight: Translated: 25992; Mature: 25992

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKAIMSNNIQGCKQLFGASLCTAITLITSSSIAAQVQMAKLNNWRFYPDTKKLEITLS
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCEEECCCCCEEEEEEC
SSKTPQYFYLNEPPRLVVDIPDTLLGKVSTQQNYTGSVQRVRVSQLSANVTRIVLDLAPG
CCCCCEEEEECCCCEEEEECCHHHHHCCCCCCCCCCCHHEEEHHHHHCCEEEEEEECCCC
STVDANKVQLQPATRQNPTRWVLRPAIVKVAKQSSNFQQSPKSQQPTTPSYIQLPSTLPP
CCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCC
ITGLQQQPFVSVPPLNSNNPTLKPSNFNNTNSSTPPVPTLPNYPVIEFGQPLPKFR
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSKAIMSNNIQGCKQLFGASLCTAITLITSSSIAAQVQMAKLNNWRFYPDTKKLEITLS
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCEEECCCCCEEEEEEC
SSKTPQYFYLNEPPRLVVDIPDTLLGKVSTQQNYTGSVQRVRVSQLSANVTRIVLDLAPG
CCCCCEEEEECCCCEEEEECCHHHHHCCCCCCCCCCCHHEEEHHHHHCCEEEEEEECCCC
STVDANKVQLQPATRQNPTRWVLRPAIVKVAKQSSNFQQSPKSQQPTTPSYIQLPSTLPP
CCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCC
ITGLQQQPFVSVPPLNSNNPTLKPSNFNNTNSSTPPVPTLPNYPVIEFGQPLPKFR
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA